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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2bfuL_

Fold library idPDB HeaderMoleculeTitle
c2bfuL_PDB header: virusChain: L: PDB Molecule: cowpea mosaic virus, large (l) subunit;PDBTitle: x-ray structure of cpmv top component


Added to library: Tue Mar 16 12:24:51 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEQNLFALSLDDTSSVRGSLLDTKFAQTRVLLSKAMAGGDVLLDEYLYDVVNGQDFRATVAFLRTHVITG
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Known secondary structure (DSSP)



TTTTTTS







TTTS




B



SS

SS



B

SSTT
S



SS
GGGGSS

B
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KIKVTATTNISDNSGCCLMLAINSGVRGKYSTDVYTICSQDSMTWNPGCKKNFSFTFNPNPCGDSWSAEM
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Known secondary structure (DSSP)
B






SS




B




S

SS


SSSSTTTTS




TTSSS

B

B
S
SSSS
B
S
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ISRSRVRMTVICVSGWTLSPTTDVIAKLDWSIVNEKCEPTIYHLADCQNWLPLNRWMGKLTFPQGVTSEV
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Known secondary structure (DSSP) STTTT


B
B
SS

SS

SS



B













SS
SBSS







STT



 .........220.........230.........240.........250.........260.........270.........280
Sequence RRMPLSIGGGAGATQAFLANMPNSWISMWRYFRGELHFEVTKMSSPYIKATVTFLIAFGNLSDAFGFYES
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Known secondary structure (DSSP)







S


STT




TTTSTT
SSSSB
S
B





SS
SSS



B
S


TTS
S

TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FPHRIVQFAEVEEKCTLVFSQQEFVTAWSTQVNPRTTLEADGCPYLYAIIHDSTTGTISGDFNLGVKLVG
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Known secondary structure (DSSP) SS

B



SS






B
SSS

S
B
S


SS

STT

S







S



SSS




S
 .........360.........
Sequence IKDFCGIGSNPGIDGSRLL
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SS confidence


















Known secondary structure (DSSP)
SSB


S











Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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