Email l.a.kelley@imperial.ac.uk Description P45578 Date Thu Jan 5 12:03:25 GMT 2012 Unique Job ID 3e2bfb4332893072

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1j6wa_ 100.0 66 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 2 d1j6xa_ 100.0 37 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 3 d1vjea_ 100.0 46 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 4 d1j98a_ 100.0 35 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 5 d1k1sa1 76.4 19 Fold:Lesion bypass DNA polymerase (Y-family), little finger domain Superfamily:Lesion bypass DNA polymerase (Y-family), little finger domain Family:Lesion bypass DNA polymerase (Y-family), little finger domain 6 c3gqeA_ 75.6 13 PDB header:viral protein Chain: A: PDB Molecule:non-structural protein 3; PDBTitle: crystal structure of macro domain of venezuelan equine encephalitis2 virus 7 d1nyra3 69.1 21 Fold:RRF/tRNA synthetase additional domain-like Superfamily:ThrRS/AlaRS common domain Family:Threonyl-tRNA synthetase (ThrRS), second 'additional' domain 8 d1tkea2 63.5 25 Fold:RRF/tRNA synthetase additional domain-like Superfamily:ThrRS/AlaRS common domain Family:Threonyl-tRNA synthetase (ThrRS), second 'additional' domain 9 c3k2gA_ 61.8 16 PDB header:resiniferatoxin binding protein Chain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides 10 c1tkeA_ 56.7 20 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase; PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase complexed with serine 11 d1m5ha2 49.4 18 Fold:Ferredoxin-like Superfamily:Formylmethanofuran:tetrahydromethanopterin formyltransferase Family:Formylmethanofuran:tetrahydromethanopterin formyltransferase 12 d1m5sa2 48.0 26 Fold:Ferredoxin-like Superfamily:Formylmethanofuran:tetrahydromethanopterin formyltransferase Family:Formylmethanofuran:tetrahydromethanopterin formyltransferase 13 c1nyqA_ 44.0 20 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase 1; PDBTitle: structure of staphylococcus aureus threonyl-trna synthetase2 complexed with an analogue of threonyl adenylate 14 d1ryp1_ 43.2 11 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 15 d1ftra2 42.8 24 Fold:Ferredoxin-like Superfamily:Formylmethanofuran:tetrahydromethanopterin formyltransferase Family:Formylmethanofuran:tetrahydromethanopterin formyltransferase 16 d1fcda2 40.8 20 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 17 c2rp4C_ 40.2 30 PDB header:transcription Chain: C: PDB Molecule:transcription factor p53; PDBTitle: solution structure of the oligomerization domain in dmp53 18 c1m5sC_ 39.4 26 PDB header:transferase Chain: C: PDB Molecule:formylmethanofuran--tetrahydromethanopterin PDBTitle: formylmethanofuran:tetrahydromethanopterin2 fromyltransferase from methanosarcina barkeri 19 c3kewA_ 38.7 20 PDB header:transferase Chain: A: PDB Molecule:dhha1 domain protein; PDBTitle: crystal structure of probable alanyl-trna-synthase from clostridium2 perfringens 20 c2kvoA_ 38.0 28 PDB header:photosynthesis Chain: A: PDB Molecule:photosystem ii reaction center psb28 protein; PDBTitle: solution nmr structure of photosystem ii reaction center psb28 protein2 from synechocystis sp.(strain pcc 6803), northeast structural3 genomics consortium target sgr171 21 c1m5hF_ not modelled 37.2 18 PDB header:transferase Chain: F: PDB Molecule:formylmethanofuran--tetrahydromethanopterin PDBTitle: formylmethanofuran:tetrahydromethanopterin2 formyltransferase from archaeoglobus fulgidus 22 c2fhjD_ not modelled 37.0 24 PDB header:transferase Chain: D: PDB Molecule:formylmethanofuran--tetrahydromethanopterin PDBTitle: crystal structure of formylmethanofuran:2 tetrahydromethanopterin formyltransferase in complex with3 its coenzymes 23 d1hk8a_ not modelled 34.1 67 Fold:PFL-like glycyl radical enzymes Superfamily:PFL-like glycyl radical enzymes Family:Class III anaerobic ribonucleotide reductase NRDD subunit 24 c1hk8A_ not modelled 34.1 67 PDB header:oxidoreductase Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase; PDBTitle: structural basis for allosteric substrate specificity2 regulation in class iii ribonucleotide reductases:3 nrdd in complex with dgtp 25 c2kdnA_ not modelled 32.1 20 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein pfe0790c; PDBTitle: solution structure of pfe0790c, a putative bola-like2 protein from the protozoan parasite plasmodium falciparum. 26 d3bvua1 not modelled 31.8 12 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Families 57/38 glycoside transferase middle domain Family:alpha-mannosidase, domain 2 27 d1p42a1 not modelled 31.3 21 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC 28 c3ol0C_ not modelled 30.9 43 PDB header:de novo protein Chain: C: PDB Molecule:de novo designed monomer trefoil-fold sub-domain which PDBTitle: crystal structure of monofoil-4p homo-trimer: de novo designed monomer2 trefoil-fold sub-domain which forms homo-trimer assembly 29 d1v9ja_ not modelled 24.8 23 Fold:Alpha-lytic protease prodomain-like Superfamily:BolA-like Family:BolA-like 30 d1v4pa_ not modelled 24.4 15 Fold:RRF/tRNA synthetase additional domain-like Superfamily:ThrRS/AlaRS common domain Family:AlaX-like 31 c2go4A_ not modelled 23.4 20 PDB header:hydrolase Chain: A: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine PDBTitle: crystal structure of aquifex aeolicus lpxc complexed with tu-514 32 c3nzkB_ not modelled 19.3 33 PDB header:hydrolase Chain: B: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine PDBTitle: structure of lpxc from yersinia enterocolitica complexed with chir0902 inhibitor 33 c2vesA_ not modelled 19.3 36 PDB header:hydrolase Chain: A: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine PDBTitle: crystal structure of lpxc from pseudomonas aeruginosa2 complexed with the potent bb-78485 inhibitor 34 d1vlia1 not modelled 18.8 6 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 35 d1qkia1 not modelled 18.3 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 36 d2e1ba2 not modelled 17.7 18 Fold:RRF/tRNA synthetase additional domain-like Superfamily:ThrRS/AlaRS common domain Family:AlaX-like 37 c3jtzA_ not modelled 17.4 27 PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: structure of the arm-type binding domain of hpi integrase 38 d1r5pa_ not modelled 16.9 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:KaiB-like 39 c3p5rB_ not modelled 16.5 17 PDB header:lyase Chain: B: PDB Molecule:taxadiene synthase; PDBTitle: crystal structure of taxadiene synthase from pacific yew (taxus2 brevifolia) in complex with mg2+ and 2-fluorogeranylgeranyl3 diphosphate 40 d1vg0a2 not modelled 16.4 14 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:GDI-like 41 d1ppja1 not modelled 16.3 13 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 42 c3ju0A_ not modelled 15.9 23 PDB header:dna binding protein Chain: A: PDB Molecule:phage integrase; PDBTitle: structure of the arm-type binding domain of hai7 integrase 43 c2wyhA_ not modelled 15.7 12 PDB header:hydrolase Chain: A: PDB Molecule:alpha-mannosidase; PDBTitle: structure of the streptococcus pyogenes family gh38 alpha-2 mannosidase 44 c2dj9A_ not modelled 15.3 83 PDB header:cytokine Chain: A: PDB Molecule:growth-blocking peptide; PDBTitle: solution structure of growth-blocking peptide of the2 cabbage armyworm, mamestra brassicae 45 c3fwcO_ not modelled 15.1 21 PDB header:cell cycle, transcription Chain: O: PDB Molecule:protein sus1; PDBTitle: sac3:sus1:cdc31 complex 46 c1qf6A_ not modelled 15.0 20 PDB header:ligase/rna Chain: A: PDB Molecule:threonyl-trna synthetase; PDBTitle: structure of e. coli threonyl-trna synthetase complexed with its2 cognate trna 47 d2zdra1 not modelled 14.6 17 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 48 d1hr6b1 not modelled 14.4 13 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 49 c2kvtA_ not modelled 14.4 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein yaia; PDBTitle: solution nmr structure of yaia from escherichia eoli. northeast2 structural genomics target er244 50 d3eeqa1 not modelled 14.1 13 Fold:CobE/GbiG C-terminal domain-like Superfamily:CobE/GbiG C-terminal domain-like Family:CobE/GbiG C-terminal domain-like 51 d2fgea4 not modelled 14.1 23 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 52 d1xg0b_ not modelled 14.0 38 Fold:Non-globular alpha+beta subunits of globular proteins Superfamily:Non-globular alpha+beta subunits of globular proteins Family:Phycoerythrin 545 alpha-subunits 53 c3ogfA_ not modelled 14.0 33 PDB header:de novo protein Chain: A: PDB Molecule:de novo designed dimeric trefoil-fold sub-domain which PDBTitle: crystal structure of difoil-4p homo-trimer: de novo designed dimeric2 trefoil-fold sub-domain which forms homo-trimer assembly 54 d1q5qa_ not modelled 13.0 19 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 55 d1vp8a_ not modelled 12.7 23 Fold:Pyruvate kinase C-terminal domain-like Superfamily:PK C-terminal domain-like Family:MTH1675-like 56 d1xg0a_ not modelled 12.5 38 Fold:Non-globular alpha+beta subunits of globular proteins Superfamily:Non-globular alpha+beta subunits of globular proteins Family:Phycoerythrin 545 alpha-subunits 57 d1bcca1 not modelled 12.4 15 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 58 c2pmfA_ not modelled 11.8 32 PDB header:ligase Chain: A: PDB Molecule:glycyl-trna synthetase; PDBTitle: the crystal structure of a human glycyl-trna synthetase mutant 59 d3by5a1 not modelled 11.8 35 Fold:CobE/GbiG C-terminal domain-like Superfamily:CobE/GbiG C-terminal domain-like Family:CobE/GbiG C-terminal domain-like 60 c3by5A_ not modelled 11.8 35 PDB header:biosynthetic protein Chain: A: PDB Molecule:cobalamin biosynthesis protein; PDBTitle: crystal structure of cobalamin biosynthesis protein chig from2 agrobacterium tumefaciens str. c58 61 c3siiA_ not modelled 11.8 20 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:poly(adp-ribose) glycohydrolase; PDBTitle: the x-ray crystal structure of poly(adp-ribose) glycohydrolase bound2 to the inhibitor adp-hpd from thermomonospora curvata 62 c1irrA_ not modelled 11.5 83 PDB header:cytokine Chain: A: PDB Molecule:paralytic peptide; PDBTitle: solution structure of paralytic peptide of the silkworm,2 bombyx mori 63 c1wsuA_ not modelled 11.4 10 PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna 64 c1v28A_ not modelled 11.4 83 PDB header:toxin Chain: A: PDB Molecule:paralytic peptide; PDBTitle: solution structure of paralytic peptide of the wild2 silkmoth, antheraea yamamai 65 d1ivza_ not modelled 11.3 15 Fold:Ferredoxin-like Superfamily:SEA domain Family:SEA domain 66 c2djcA_ not modelled 11.3 67 PDB header:cytokine Chain: A: PDB Molecule:growth-blocking peptide; PDBTitle: solution structure of growth-blocking peptide of the2 tobacco cutworm, spodoptera litura 67 c3hbwA_ not modelled 11.0 25 PDB header:hormone Chain: A: PDB Molecule:fibroblast growth factor 13; PDBTitle: crystal structure of human fibroblast growth factor2 homologous factor 2a (fhf2a), also referred to as3 fibroblast growth factor 13a (fgf13a) 68 d2w6ka1 not modelled 10.5 18 Fold:CobE/GbiG C-terminal domain-like Superfamily:CobE/GbiG C-terminal domain-like Family:CobE/GbiG C-terminal domain-like 69 c1xuzA_ not modelled 10.2 15 PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol 70 c1vliA_ not modelled 10.1 13 PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution 71 d1q1ua_ not modelled 10.0 8 Fold:beta-Trefoil Superfamily:Cytokine Family:Fibroblast growth factors (FGF) 72 c3o3nB_ not modelled 9.7 10 PDB header:lyase Chain: B: PDB Molecule:beta-subunit 2-hydroxyacyl-coa dehydratase; PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa 73 d1qqla_ not modelled 9.5 33 Fold:beta-Trefoil Superfamily:Cytokine Family:Fibroblast growth factors (FGF) 74 d1qqka_ not modelled 9.3 33 Fold:beta-Trefoil Superfamily:Cytokine Family:Fibroblast growth factors (FGF) 75 c2q7aA_ not modelled 8.9 33 PDB header:heme binding protein Chain: A: PDB Molecule:cell surface heme-binding protein; PDBTitle: crystal structure of the cell surface heme transfer protein shp 76 c1hrlA_ not modelled 8.8 67 PDB header:toxin Chain: A: PDB Molecule:paralytic peptide i; PDBTitle: structure of a paralytic peptide from an insect, manduca2 sexta 77 d1osce_ not modelled 8.7 29 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 78 d1su7a_ not modelled 8.6 17 Fold:Prismane protein-like Superfamily:Prismane protein-like Family:Carbon monoxide dehydrogenase 79 c2piaA_ not modelled 8.4 43 PDB header:reductase Chain: A: PDB Molecule:phthalate dioxygenase reductase; PDBTitle: phthalate dioxygenase reductase: a modular structure for2 electron transfer from pyridine nucleotides to [2fe-2s] 80 d1musa_ not modelled 8.4 14 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Transposase inhibitor (Tn5 transposase) 81 c3h20A_ not modelled 8.1 17 PDB header:replication Chain: A: PDB Molecule:replication protein b; PDBTitle: crystal structure of primase repb' 82 c2yutA_ not modelled 8.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:putative short-chain oxidoreductase; PDBTitle: crystal structure of putative short-chain oxidoreductase tthb094 from2 thermus thermophilus hb8 83 d1kr4a_ not modelled 7.6 29 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 84 c3lmaC_ not modelled 7.6 19 PDB header:membrane protein Chain: C: PDB Molecule:stage v sporulation protein ad (spovad); PDBTitle: crystal structure of the stage v sporulation protein ad2 (spovad) from bacillus licheniformis. northeast structural3 genomics consortium target bir6. 85 c1f0cB_ not modelled 7.4 41 PDB header:viral protein Chain: B: PDB Molecule:ice inhibitor; PDBTitle: structure of the viral serpin crma 86 c3lvtA_ not modelled 7.4 15 PDB header:hydrolase Chain: A: PDB Molecule:glycosyl hydrolase, family 38; PDBTitle: the crystal structure of a protein in the glycosyl hydrolase2 family 38 from enterococcus faecalis to 2.55a 87 c2wk1A_ not modelled 7.4 19 PDB header:transferase Chain: A: PDB Molecule:novp; PDBTitle: structure of the o-methyltransferase novp 88 c3osuA_ not modelled 7.3 16 PDB header:oxidoreductase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of the 3-oxoacyl-acyl carrier protein reductase,2 fabg, from staphylococcus aureus 89 c2dgdD_ not modelled 7.0 19 PDB header:lyase Chain: D: PDB Molecule:223aa long hypothetical arylmalonate decarboxylase; PDBTitle: crystal structure of st0656, a function unknown protein from2 sulfolobus tokodaii 90 c2zfhA_ not modelled 7.0 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cuta; PDBTitle: crystal structure of putative cuta1 from homo sapiens at 2.05a2 resolution 91 d1rypl_ not modelled 6.8 10 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 92 d1p1la_ not modelled 6.7 47 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 93 d1nzaa_ not modelled 6.7 29 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 94 d1ukua_ not modelled 6.6 12 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 95 c2e7vA_ not modelled 6.5 7 PDB header:hydrolase Chain: A: PDB Molecule:transmembrane protease; PDBTitle: crystal structure of sea domain of transmembrane protease2 from mus musculus 96 d2nxca1 not modelled 6.5 22 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Ribosomal protein L11 methyltransferase PrmA 97 c1ep3B_ not modelled 6.5 50 PDB header:oxidoreductase Chain: B: PDB Molecule:dihydroorotate dehydrogenase b (pyrk subunit); PDBTitle: crystal structure of lactococcus lactis dihydroorotate dehydrogenase2 b. data collected under cryogenic conditions. 98 c1xk8A_ not modelled 6.5 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:divalent cation tolerant protein cuta; PDBTitle: divalent cation tolerant protein cuta from homo sapiens2 o60888 99 d2zfha1 not modelled 6.5 29 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1)