Fold library entry viewer: c2pmfA_

Added to library: Tue Mar 16 12:09:24 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	I	V	D	R	A	K	M	E	D	T	L	K	R	R	F	F	Y	D	Q	A	F	A	I	Y	G	G	V	S	G	L	Y	D	F	G	P	V	G	C	A	L	K	N	N	I	I	Q	T	W	R	Q	H	F	I	Q	E	E	Q	I	L	E	I	D	C	T	M	L	T	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S				T	T	G	G	G	T			T	T																							T					T								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	V	L	K	T	S	G	H	V	D	K	F	A	D	F	M	V	K	D	V	K	N	G	E	C	F	R	A	D	H	L	L	K	A	H	L	Q	K	L	M	S	D	K	K	C	S	V	E	K	K	S	E	M	E	S	V	L	A	Q	L	D	N	Y	G	Q	Q	E	L	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		T	T	T	S								B	T	T	T																			S		S	S	S													T	T	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	F	V	N	Y	N	V	K	S	P	I	T	G	N	D	L	S	P	P	V	S	F	N	L	M	F	K	T	F	I	G	P	G	G	N	M	P	G	Y	L	R	P	E	T	A	Q	G	I	F	L	N	F	K	R	L	L	E	F	N	Q	G	K	L	P	F	A	A	A	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T				S	S	S				B									S						S	S	S	S	S	S						S		S						T	T								T	T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	N	S	F	R	N	E	I	S	P	R	S	G	L	I	R	V	R	E	F	T	M	A	E	I	E	H	F	V	D	P	S	E	K	D	H	P	K	F	Q	N	V	A	D	L	H	L	Y	L	Y	S	A	K	A	Q	V	S	G	Q	S	A	R	K	M	R	L	G	D	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S			S	T	T	S	S		S													T	T					T	T	G	G	G	T	T	T													T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	Q	G	V	I	N	N	T	V	L	G	Y	F	I	G	R	I	Y	L	Y	L	T	K	V	G	I	S	P	D	K	L	R	F	R	Q	H	M	E	N	A	C	D	C	W	D	A	E	S	K	T	S	Y	G	W	I	E	I	V	G	C	A	D	R	S	C	Y	D	L	S	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S																				T			G	G	G																					T	T												S	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	A	R	R	F	Q	K	T	L	Y	V	E	E	V	V	P	N	V	I	E	P	S	F	R	L	G	R	I	M	Y	T	V	F	E	H	T	F	H	V	R	E	G	D	E	Q	R	T	F	F	S	F	P	A	V	V	A	P	F	K	C	S	V	L	P	L	S	Q	N	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T																														S	S	S	S									T	T	T	S	S		S						S	S			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	M	P	F	V	K	E	L	S	E	A	L	T	R	H	G	V	S	H	K	V	D	D	S	S	G	S	I	G	R	R	Y	A	R	T	D	E	I	G	V	A	F	G	V	T	I	D	F	D	T	V	N	K	T	P	H	T	A	T	L	R	D	R	D	S	M	R	Q	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T														T	T										S												T	T														S	S	S								T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Sequence	A	E	I	S	E	L	P	S	I	V	Q	D	L	A	N	G	N	I	T	W	A	D	V	E	A	R	Y	P	L	F	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T										T	T	S	S									S

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PDB structure

FASTA sequence

Hidden Markov model

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