Email l.a.kelley@imperial.ac.uk Description P0ADS9 Date Thu Jan 5 11:21:46 GMT 2012 Unique Job ID 3cd1ca0b2f7473d3

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1eq1a_ 60.9 13 Fold:Apolipophorin-III Superfamily:Apolipophorin-III Family:Apolipophorin-III 2 c2pfuA_ 54.9 8 PDB header:transport protein Chain: A: PDB Molecule:biopolymer transport exbd protein; PDBTitle: nmr strcuture determination of the periplasmic domain of exbd from2 e.coli 3 d1kgsa1 53.2 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 4 d1eeja2 52.0 26 Fold:Cystatin-like Superfamily:DsbC/DsbG N-terminal domain-like Family:DsbC/DsbG N-terminal domain-like 5 c3poaA_ 46.2 14 PDB header:peptide binding protein Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: structural and functional analysis of phosphothreonine-dependent fha2 domain interactions 6 d1t3ba2 42.9 24 Fold:Cystatin-like Superfamily:DsbC/DsbG N-terminal domain-like Family:DsbC/DsbG N-terminal domain-like 7 c6paxA_ 38.4 22 PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions 8 c2pmuD_ 38.3 14 PDB header:transcription regulation Chain: D: PDB Molecule:response regulator phop; PDBTitle: crystal structure of the dna-binding domain of phop 9 c2iyjA_ 38.2 29 PDB header:isomerase Chain: A: PDB Molecule:thiol disulfide interchange protein dsbc; PDBTitle: crystal structure of the n-terminal dimer domain of e.coli2 dsbc 10 d1opca_ 35.8 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 11 d1pdnc_ 35.5 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 12 c2hwvA_ 31.1 31 PDB header:transcription Chain: A: PDB Molecule:dna-binding response regulator vicr; PDBTitle: crystal structure of an essential response regulator dna binding2 domain, vicrc in enterococcus faecalis, a member of the yycf3 subfamily. 13 c2jzyA_ 30.8 13 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein pcor; PDBTitle: solution structure of c-terminal effector domain of2 putative two-component-system response regulator involved3 in copper resistance from klebsiella pneumoniae 14 d1smpi_ 30.7 18 Fold:Streptavidin-like Superfamily:beta-Barrel protease inhibitors Family:Metalloprotease inhibitor 15 d1p2fa1 30.2 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 16 d1g3ga_ 29.6 15 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 17 c3fm8A_ 25.7 14 PDB header:transport protein/hydrolase activator Chain: A: PDB Molecule:kinesin-like protein kif13b; PDBTitle: crystal structure of full length centaurin alpha-1 bound with the fha2 domain of kif13b (capri target) 18 d1ys7a1 24.1 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 19 c2zxjB_ 23.0 23 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulatory protein walr; PDBTitle: crystal structure of yycf dna-binding domain from staphylococcus2 aureus 20 c2kklA_ 22.9 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mb1858; PDBTitle: solution nmr structure of fha domain of mb1858 from2 mycobacterium bovis. northeast structural genomics3 consortium target mbr243c (24-155). 21 d1pcfa_ not modelled 22.0 21 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:Transcriptional coactivator PC4 C-terminal domain 22 d1wlna1 not modelled 22.0 19 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 23 c2raxY_ not modelled 21.8 13 PDB header:cell cycle Chain: Y: PDB Molecule:borealin; PDBTitle: crystal structure of borealin (20-78) bound to survivin (1-120) 24 d1d6za4 not modelled 19.7 18 Fold:N domain of copper amine oxidase-like Superfamily:Copper amine oxidase, domain N Family:Copper amine oxidase, domain N 25 c3gmgB_ not modelled 19.1 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein rv1825/mt1873; PDBTitle: crystal structure of an uncharacterized conserved protein2 from mycobacterium tuberculosis 26 c2hqnA_ not modelled 18.9 24 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 27 d1gxqa_ not modelled 18.7 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 28 c2xu6B_ not modelled 18.5 14 PDB header:protein binding Chain: B: PDB Molecule:mdv1 coiled coil; PDBTitle: mdv1 coiled coil domain 29 d1oisa_ not modelled 18.4 30 Fold:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Superfamily:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Family:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment 30 c2k27A_ not modelled 17.9 21 PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain 31 c1nl3B_ not modelled 17.6 12 PDB header:protein transport Chain: B: PDB Molecule:preprotein translocase seca 1 subunit; PDBTitle: crystal structure of the seca protein translocation atpase2 from mycobacterium tuberculosis in apo form 32 d1k78a1 not modelled 17.4 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 33 c2jv8A_ not modelled 17.3 38 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ne1242; PDBTitle: solution structure of protein ne1242 from nitrosomonas2 europaea. northeast structural genomics consortium target3 net4 34 c1r21A_ not modelled 16.7 14 PDB header:cell cycle Chain: A: PDB Molecule:antigen ki-67; PDBTitle: solution structure of human ki67 fha domain 35 c3prlD_ not modelled 16.3 25 PDB header:oxidoreductase Chain: D: PDB Molecule:nadp-dependent glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of nadp-dependent glyceraldehyde-3-phosphate2 dehydrogenase from bacillus halodurans c-125 36 d6paxa1 not modelled 15.8 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 37 c1lq7A_ not modelled 15.0 18 PDB header:de novo protein Chain: A: PDB Molecule:alpha3w; PDBTitle: de novo designed protein model of radical enzymes 38 d1k4ta3 not modelled 15.0 26 Fold:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Superfamily:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Family:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment 39 d1ywya1 not modelled 14.8 15 Fold:PH domain-like barrel Superfamily:PA2021-like Family:PA2021-like 40 d1b63a1 not modelled 14.1 9 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:DNA gyrase/MutL, second domain 41 c3v4cB_ not modelled 13.8 27 PDB header:oxidoreductase Chain: B: PDB Molecule:aldehyde dehydrogenase (nadp+); PDBTitle: crystal structure of a semialdehyde dehydrogenase from sinorhizobium2 meliloti 1021 42 d1azca_ not modelled 13.4 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 43 d2hgsa1 not modelled 13.3 11 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Eukaryotic glutathione synthetase, substrate-binding domain 44 d2o8ra2 not modelled 13.0 6 Fold:PHP14-like Superfamily:PHP14-like Family:PPK middle domain-like 45 c2b9sA_ not modelled 12.9 18 PDB header:isomerase/dna Chain: A: PDB Molecule:topoisomerase i-like protein; PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex 46 d1rz4a1 not modelled 12.4 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain 47 d1cc3a_ not modelled 11.8 24 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 48 d1wnda_ not modelled 11.8 21 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 49 d2ccwa1 not modelled 11.2 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 50 c1gk9A_ not modelled 10.7 8 PDB header:antibiotic resistance Chain: A: PDB Molecule:penicillin g acylase alpha subunit; PDBTitle: crystal structures of penicillin acylase enzyme-substrate2 complexes: structural insights into the catalytic mechanism 51 d2g1la1 not modelled 10.3 13 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 52 c2ae3A_ not modelled 9.8 9 PDB header:hydrolase Chain: A: PDB Molecule:glutaryl 7-aminocephalosporanic acid acylase; PDBTitle: glutaryl 7-aminocephalosporanic acid acylase: mutational study of2 activation mechanism 53 c1a31A_ not modelled 9.6 27 PDB header:isomerase/dna Chain: A: PDB Molecule:protein (topoisomerase i); PDBTitle: human reconstituted dna topoisomerase i in covalent complex2 with a 22 base pair dna duplex 54 d1joia_ not modelled 9.4 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 55 c3nrlB_ not modelled 9.3 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein rumgna_01417; PDBTitle: crystal structure of protein rumgna_01417 from ruminococcus gnavus,2 northeast structural genomics consortium target ugr76 56 c1nh3A_ not modelled 9.3 27 PDB header:isomerase/dna Chain: A: PDB Molecule:dna topoisomerase i; PDBTitle: human topoisomerase i ara-c complex 57 c2h47C_ not modelled 9.2 15 PDB header:oxidoreductase/electron transport Chain: C: PDB Molecule:azurin; PDBTitle: crystal structure of an electron transfer complex between2 aromatic amine dephydrogenase and azurin from alcaligenes3 faecalis (form 1) 58 d2v4jc1 not modelled 9.0 29 Fold:DsrC, the gamma subunit of dissimilatory sulfite reductase Superfamily:DsrC, the gamma subunit of dissimilatory sulfite reductase Family:DsrC, the gamma subunit of dissimilatory sulfite reductase 59 c2p2uA_ not modelled 9.0 13 PDB header:dna binding protein Chain: A: PDB Molecule:host-nuclease inhibitor protein gam, putative; PDBTitle: crystal structure of putative host-nuclease inhibitor2 protein gam from desulfovibrio vulgaris 60 c3uotB_ not modelled 8.8 17 PDB header:cell cycle Chain: B: PDB Molecule:mediator of dna damage checkpoint protein 1; PDBTitle: crystal structure of mdc1 fha domain in complex with a phosphorylated2 peptide from the mdc1 n-terminus 61 c3k3wA_ not modelled 8.6 19 PDB header:hydrolase Chain: A: PDB Molecule:penicillin g acylase; PDBTitle: thermostable penicillin g acylase from alcaligence faecalis2 in orthorhombic form 62 d1jzga_ not modelled 8.5 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 63 d1uhta_ not modelled 8.5 17 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 64 d2ff4a3 not modelled 8.4 18 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 65 c2k4jA_ not modelled 8.2 19 PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: arsr dna binding domain 66 d1h7sa1 not modelled 8.2 14 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:DNA gyrase/MutL, second domain 67 c1t3jA_ not modelled 8.1 12 PDB header:membrane protein Chain: A: PDB Molecule:mitofusin 1; PDBTitle: mitofusin domain hr2 v686m/i708m mutant 68 d2affa1 not modelled 7.9 14 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 69 c3i38D_ not modelled 7.8 16 PDB header:chaperone Chain: D: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 70 d2g82a1 not modelled 7.5 25 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 71 d1g6ga_ not modelled 7.5 20 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 72 c3gqsB_ not modelled 7.4 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:adenylate cyclase-like protein; PDBTitle: crystal structure of the fha domain of ct664 protein from chlamydia2 trachomatis 73 d1ggaa1 not modelled 7.3 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 74 c3swfA_ not modelled 7.2 18 PDB header:transport protein Chain: A: PDB Molecule:cgmp-gated cation channel alpha-1; PDBTitle: cnga1 621-690 containing clz domain 75 d1oaia_ not modelled 7.0 17 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 76 c3iwkB_ not modelled 7.0 9 PDB header:oxidoreductase Chain: B: PDB Molecule:aminoaldehyde dehydrogenase; PDBTitle: crystal structure of aminoaldehyde dehydrogenase 1 from2 pisum sativum (psamadh1) 77 d1o04a_ not modelled 7.0 8 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 78 c3i38L_ not modelled 7.0 15 PDB header:chaperone Chain: L: PDB Molecule:putative chaperone dnaj; PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 79 d1f32a_ not modelled 7.0 9 Fold:Pepsin inhibitor-3 Superfamily:Pepsin inhibitor-3 Family:Pepsin inhibitor-3 80 c3b4wA_ not modelled 6.7 18 PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of mycobacterium tuberculosis aldehyde dehydrogenase2 complexed with nad+ 81 c2wybA_ not modelled 6.6 23 PDB header:hydrolase Chain: A: PDB Molecule:acyl-homoserine lactone acylase pvdq subunit PDBTitle: the quorum quenching n-acyl homoserine lactone acylase pvdq2 with a covalently bound dodecanoic acid 82 d1tg7a5 not modelled 6.6 15 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Glycosyl hydrolases family 35 catalytic domain 83 c2ve5H_ not modelled 6.6 7 PDB header:oxidoreductase Chain: H: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystallographic structure of betaine aldehyde2 dehydrogenase from pseudomonas aeruginosa 84 c3ho6B_ not modelled 6.4 16 PDB header:toxin Chain: B: PDB Molecule:toxin a; PDBTitle: structure-function analysis of inositol hexakisphosphate-2 induced autoprocessing in clostridium difficile toxin a 85 d1xdpa2 not modelled 6.4 19 Fold:PHP14-like Superfamily:PHP14-like Family:PPK middle domain-like 86 c1jzdA_ not modelled 6.3 29 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: dsbc-dsbdalpha complex 87 d1hloa_ not modelled 6.3 23 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 88 c2kz6A_ not modelled 6.3 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of protein cv0426 from chromobacterium violaceum,2 northeast structural genomics consortium (nesg) target cvt2 89 d2ff4a1 not modelled 6.1 5 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 90 c1fi4A_ not modelled 6.1 18 PDB header:lyase Chain: A: PDB Molecule:mevalonate 5-diphosphate decarboxylase; PDBTitle: the x-ray crystal structure of mevalonate 5-diphosphate decarboxylase2 at 2.3 angstrom resolution. 91 c3nepX_ not modelled 6.0 16 PDB header:oxidoreductase Chain: X: PDB Molecule:malate dehydrogenase; PDBTitle: 1.55a resolution structure of malate dehydrogenase from salinibacter2 ruber 92 c1ajnA_ not modelled 5.9 8 PDB header:antibiotic resistance Chain: A: PDB Molecule:penicillin amidohydrolase; PDBTitle: penicillin acylase complexed with p-nitrophenylacetic acid 93 d1n62a2 not modelled 5.9 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 94 c1m5iA_ not modelled 5.8 14 PDB header:antitumor protein Chain: A: PDB Molecule:apc protein; PDBTitle: crystal structure of the coiled coil region 129-250 of the2 tumor suppressor gene product apc 95 c2pnvA_ not modelled 5.8 32 PDB header:membrane protein Chain: A: PDB Molecule:small conductance calcium-activated potassium PDBTitle: crystal structure of the leucine zipper domain of small-2 conductance ca2+-activated k+ (skca) channel from rattus3 norvegicus 96 d1ag8a_ not modelled 5.7 8 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 97 c1t3bA_ not modelled 5.7 26 PDB header:isomerase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: x-ray structure of dsbc from haemophilus influenzae 98 d1bhga3 not modelled 5.7 24 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 99 d1lgpa_ not modelled 5.6 13 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain