Fold library entry viewer: d1o04a_

Added to library: Tue Mar 16 12:06:48 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	V	P	A	P	N	Q	Q	P	E	V	F	C	N	Q	I	F	I	N	N	E	W	H	D	A	V	S	R	K	T	F	P	T	V	N	P	S	T	G	E	V	I	C	Q	V	A	E	G	D	K	E	D	V	D	K	A	V	K	A	A	R	A	A	F	Q	L	G	S	P	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S							S				T	T						T	T									T	T	T	T									B																T	S	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	R	M	D	A	S	H	R	G	R	L	L	N	R	L	A	D	L	I	E	R	D	R	T	Y	L	A	A	L	E	T	L	D	N	G	K	P	Y	V	I	S	Y	L	V	D	L	D	M	V	L	K	C	L	R	Y	Y	A	G	W	A	D	K	Y	H	G	K	T	I	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																			T																						T																T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	G	D	F	F	S	Y	T	R	H	E	P	V	G	V	C	G	Q	I	I	P	W	N	F	P	L	L	M	Q	A	W	K	L	G	P	A	L	A	T	G	N	V	V	V	M	K	V	A	E	Q	T	P	L	T	A	L	Y	V	A	N	L	I	K	E	A	G	F	P	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S																			S	S	S															T	T									T	T	S															T			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	V	N	I	V	P	G	F	G	P	T	A	G	A	A	I	A	S	H	E	D	V	D	K	V	A	F	T	G	S	T	E	I	G	R	V	I	Q	V	A	A	G	S	S	N	L	K	R	V	T	L	E	L	G	G	K	S	P	N	I	I	M	S	D	A	D	M	D	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						B		T	T	T							T		T	T								S															T	T																		T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	E	Q	A	H	F	A	L	F	F	N	Q	G	Q	C	S	C	A	G	S	R	T	F	V	Q	E	D	I	Y	D	E	F	V	E	R	S	V	A	R	A	K	S	R	V	V	G	N	P	F	D	S	K	T	E	Q	G	P	Q	V	D	E	T	Q	F	K	K	I	L	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	G			T	T																												B			T	T	S	T	T		S	B				S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	N	T	G	K	Q	E	G	A	K	L	L	C	G	G	G	I	A	A	D	R	G	Y	F	I	Q	P	T	V	F	G	D	V	Q	D	G	M	T	I	A	K	E	E	I	F	G	P	V	M	Q	I	L	K	F	K	T	I	E	E	V	V	G	R	A	N	N	S	T	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T								S	B			S	S	S	S		B							S			T	T	S					S				S	S																				S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	A	A	A	V	F	T	K	D	L	D	K	A	N	Y	L	S	Q	A	L	Q	A	G	T	V	W	V	N	C	Y	D	V	F	G	A	Q	S	P	F	G	G	Y	K	M	S	G	S	G	R	E	L	G	E	Y	G	L	Q	A	Y	T	E	V	K	T	V	T	V	K	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S														S	S					S		S	S				T	T	S		B			S	G	G	G			S		B	S	T	G	G	G	G	G	G	G											S
	.	.	.	.
Sequence	Q	K	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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