Email l.a.kelley@imperial.ac.uk Description P77433 Date Thu Jan 5 12:29:16 GMT 2012 Unique Job ID 39c2cfbb9ccbcede

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2g40a1 100.0 20 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:YkgG-like 2 c2g40A_ 100.0 20 PDB header:unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of a duf162 family protein (dr_1909) from2 deinococcus radiodurans at 1.70 a resolution 3 d2g82a1 37.6 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 4 d1a5ta2 37.5 23 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 5 d2pkqo1 33.9 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 6 d1d2na_ 33.1 24 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 7 c1a6cA_ 30.7 26 PDB header:virus Chain: A: PDB Molecule:tobacco ringspot virus capsid protein; PDBTitle: structure of tobacco ringspot virus 8 d1i32a1 29.4 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 9 d1hdgo1 29.2 21 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 10 c2y7uM_ 28.4 17 PDB header:virus Chain: M: PDB Molecule:coat protein; PDBTitle: x-ray structure of the grapevine fanleaf virus 11 c2qz4A_ 27.9 13 PDB header:hydrolase Chain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp 12 d1vc2a1 24.7 21 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 13 d1obfo1 24.1 25 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 14 d3gpdg1 23.6 26 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 15 d3cmco1 21.7 26 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 16 c1nsfA_ 20.7 24 PDB header:protein transport Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor; PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf) 17 d1u8fo1 20.7 29 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 18 d1gado1 20.6 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 19 d1nbwa3 18.2 21 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ATPase domain of dehydratase reactivase alpha subunit 20 c3co5B_ 17.9 8 PDB header:transcription regulator Chain: B: PDB Molecule:putative two-component system transcriptional response PDBTitle: crystal structure of sigma-54 interaction domain of putative2 transcriptional response regulator from neisseria gonorrhoeae 21 c2ce7B_ not modelled 17.8 22 PDB header:cell division protein Chain: B: PDB Molecule:cell division protein ftsh; PDBTitle: edta treated 22 d1j0xo1 not modelled 17.4 29 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 23 d1rm4a1 not modelled 17.1 21 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 24 c2z1dA_ not modelled 16.5 36 PDB header:metal binding protein Chain: A: PDB Molecule:hydrogenase expression/formation protein hypd; PDBTitle: crystal structure of [nife] hydrogenase maturation protein, hypd from2 thermococcus kodakaraensis 25 c1fnnB_ not modelled 16.4 14 PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum 26 d1q5za_ not modelled 15.8 27 Fold:Invasion protein A (SipA) , C-terminal actin binding domain Superfamily:Invasion protein A (SipA) , C-terminal actin binding domain Family:Invasion protein A (SipA) , C-terminal actin binding domain 27 c1q5zA_ not modelled 15.8 27 PDB header:cell invasion Chain: A: PDB Molecule:sipa; PDBTitle: crystal structure of the c-terminal actin binding domain of2 salmonella invasion protein a (sipa) 28 d1k3ta1 not modelled 15.7 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 29 c3sggA_ not modelled 15.1 28 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical hydrolase; PDBTitle: crystal structure of a hypothetical hydrolase (bt_2193) from2 bacteroides thetaiotaomicron vpi-5482 at 1.25 a resolution 30 c2dhrC_ not modelled 14.4 17 PDB header:hydrolase Chain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l) 31 c2c9oC_ not modelled 13.4 14 PDB header:hydrolase Chain: C: PDB Molecule:ruvb-like 1; PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1 32 c3l7oB_ not modelled 13.3 13 PDB header:isomerase Chain: B: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: crystal structure of ribose-5-phosphate isomerase a from streptococcus2 mutans ua159 33 d1in4a2 not modelled 12.8 8 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 34 c3b9pA_ not modelled 12.7 14 PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin 35 c3u7jA_ not modelled 12.5 16 PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: crystal structure of ribose-5-phosphate isomerase a from burkholderia2 thailandensis 36 c1xwiA_ not modelled 12.5 14 PDB header:protein transport Chain: A: PDB Molecule:skd1 protein; PDBTitle: crystal structure of vps4b 37 d1sxje2 not modelled 12.3 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 38 d2joya1 not modelled 12.2 14 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L14e 39 d1v5wa_ not modelled 12.2 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 40 c3u5cG_ not modelled 12.1 22 PDB header:ribosome Chain: G: PDB Molecule:40s ribosomal protein s6-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution 41 d2b4ro1 not modelled 11.5 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 42 c1jr3E_ not modelled 11.2 29 PDB header:transferase Chain: E: PDB Molecule:dna polymerase iii, delta' subunit; PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii 43 d1njfa_ not modelled 11.1 12 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 44 d1ggaa1 not modelled 11.1 21 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 45 c1w5sB_ not modelled 11.0 13 PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) 46 d2pl1a1 not modelled 10.8 11 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 47 c2xznY_ not modelled 10.5 17 PDB header:ribosome Chain: Y: PDB Molecule:rps6e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 48 c1ahuB_ not modelled 10.4 15 PDB header:flavoenzyme Chain: B: PDB Molecule:vanillyl-alcohol oxidase; PDBTitle: structure of the octameric flavoenzyme vanillyl-alcohol2 oxidase in complex with p-cresol 49 c1l6jA_ not modelled 10.4 27 PDB header:hydrolase Chain: A: PDB Molecule:matrix metalloproteinase-9; PDBTitle: crystal structure of human matrix metalloproteinase mmp92 (gelatinase b). 50 c2r65A_ not modelled 9.8 12 PDB header:hydrolase Chain: A: PDB Molecule:cell division protease ftsh homolog; PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex 51 d1t9ka_ not modelled 8.9 13 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:IF2B-like 52 c2kyrA_ not modelled 8.8 15 PDB header:transferase Chain: A: PDB Molecule:fructose-like phosphotransferase enzyme iib component 1; PDBTitle: solution structure of enzyme iib subunit of pts system from2 escherichia coli k12. northeast structural genomics consortium target3 er315/ontario center for structural proteomics target ec0544 53 d2r48a1 not modelled 8.7 8 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Fructose specific IIB subunit-like 54 c3cnbC_ not modelled 8.7 7 PDB header:dna binding protein Chain: C: PDB Molecule:dna-binding response regulator, merr family; PDBTitle: crystal structure of signal receiver domain of dna binding response2 regulator protein (merr) from colwellia psychrerythraea 34h 55 d2a9sa1 not modelled 8.4 11 Fold:Anticodon-binding domain-like Superfamily:CinA-like Family:CinA-like 56 c2zayA_ not modelled 8.3 14 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator from desulfuromonas2 acetoxidans 57 d1u0sy_ not modelled 8.3 7 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 58 d1r7ra3 not modelled 8.1 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 59 c3eulB_ not modelled 8.1 20 PDB header:transcription Chain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis 60 c3d8bB_ not modelled 8.1 17 PDB header:hydrolase Chain: B: PDB Molecule:fidgetin-like protein 1; PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp 61 c2j17A_ not modelled 7.6 20 PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase yil113w; PDBTitle: ptyr bound form of sdp-1 62 c3q3qA_ not modelled 7.3 13 PDB header:hydrolase Chain: A: PDB Molecule:alkaline phosphatase; PDBTitle: crystal structure of spap: an novel alkaline phosphatase from2 bacterium sphingomonas sp. strain bsar-1 63 c3s93B_ not modelled 7.3 7 PDB header:transcription Chain: B: PDB Molecule:tudor domain-containing protein 5; PDBTitle: crystal structure of conserved motif in tdrd5 64 d1biaa2 not modelled 7.3 14 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:Biotin repressor (BirA) 65 d1qvra3 not modelled 7.2 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 66 d1izca_ not modelled 7.1 11 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:HpcH/HpaI aldolase 67 c1izcA_ not modelled 7.1 11 PDB header:lyase Chain: A: PDB Molecule:macrophomate synthase intermolecular diels-alderase; PDBTitle: crystal structure analysis of macrophomate synthase 68 d1r6bx3 not modelled 7.1 10 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 69 d1p2fa2 not modelled 7.1 12 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 70 d1sp8a1 not modelled 6.9 12 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 71 d1lv7a_ not modelled 6.9 21 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 72 c1eakA_ not modelled 6.7 18 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:72 kda type iv collagenase; PDBTitle: catalytic domain of prommp-2 e404q mutant 73 d2ce7a2 not modelled 6.6 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 74 c1nbwA_ not modelled 6.5 20 PDB header:hydrolase Chain: A: PDB Molecule:glycerol dehydratase reactivase alpha subunit; PDBTitle: glycerol dehydratase reactivase 75 c3eihB_ not modelled 6.5 14 PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas 76 d1fnna2 not modelled 6.3 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 77 d1zesa1 not modelled 6.2 11 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 78 d1sqia1 not modelled 6.2 10 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 79 c3ecjC_ not modelled 6.1 38 PDB header:oxidoreductase Chain: C: PDB Molecule:protein (homoprotocatechuate 2,3-dioxygenase); PDBTitle: structure of e323l mutant of homoprotocatechuate 2,3-dioxygenase from2 brevibacterium fuscum at 1.65a resolution 80 c3b8iF_ not modelled 6.1 21 PDB header:lyase Chain: F: PDB Molecule:pa4872 oxaloacetate decarboxylase; PDBTitle: crystal structure of oxaloacetate decarboxylase from pseudomonas2 aeruginosa (pa4872) in complex with oxalate and mg2+. 81 c3iuyB_ not modelled 6.1 18 PDB header:hydrolase Chain: B: PDB Molecule:probable atp-dependent rna helicase ddx53; PDBTitle: crystal structure of ddx53 dead-box domain 82 d1e94e_ not modelled 5.9 38 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 83 d1stza2 not modelled 5.7 11 Fold:Profilin-like Superfamily:GAF domain-like Family:HrcA C-terminal domain-like 84 d2d0oa3 not modelled 5.6 20 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ATPase domain of dehydratase reactivase alpha subunit 85 c4a1dE_ not modelled 5.6 25 PDB header:ribosome Chain: E: PDB Molecule:rpl6; PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of3 molecule 4. 86 c3izcG_ not modelled 5.3 36 PDB header:ribosome Chain: G: PDB Molecule:60s ribosomal protein rpl6 (l6e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 87 d1s8na_ not modelled 5.3 13 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 88 c2yvkA_ not modelled 5.2 12 PDB header:isomerase Chain: A: PDB Molecule:methylthioribose-1-phosphate isomerase; PDBTitle: crystal structure of 5-methylthioribose 1-phosphate2 isomerase product complex from bacillus subtilis 89 d1g6oa_ not modelled 5.2 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 90 c2f6rA_ not modelled 5.2 14 PDB header:transferase Chain: A: PDB Molecule:bifunctional coenzyme a synthase; PDBTitle: crystal structure of bifunctional coenzyme a synthase (coa synthase):2 (18044849) from mus musculus at 1.70 a resolution 91 d1sp8a2 not modelled 5.1 11 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases