Email l.a.kelley@imperial.ac.uk Description P76484 Date Thu Jan 5 12:23:29 GMT 2012 Unique Job ID 36a054a428867258

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1efub3 95.2 23 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 2 d1xb2b1 93.8 25 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 3 d1aipc1 93.7 31 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 4 d1v92a_ 92.2 21 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 5 c1efuB_ 91.6 23 PDB header:complex (two elongation factors) Chain: B: PDB Molecule:elongation factor ts; PDBTitle: elongation factor complex ef-tu/ef-ts from escherichia coli 6 c1aipG_ 91.4 31 PDB header:complex of two elongation factors Chain: G: PDB Molecule:elongation factor ts; PDBTitle: ef-tu ef-ts complex from thermus thermophilus 7 d2cp9a1 90.6 26 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 8 d1wj7a1 90.5 20 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 9 c1xb2B_ 87.8 21 PDB header:translation Chain: B: PDB Molecule:elongation factor ts, mitochondrial; PDBTitle: crystal structure of bos taurus mitochondrial elongation2 factor tu/ts complex 10 c3mmpC_ 87.8 23 PDB header:transferase Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins 11 d2daha1 86.5 27 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 12 c2dahA_ 86.4 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquilin-3; PDBTitle: solution structure of the c-terminal uba domain in the2 human ubiquilin 3 13 d1veja1 86.1 22 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 14 c1wr1B_ 85.9 22 PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin 15 d2bwba1 85.4 22 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 16 c2dnaA_ 85.3 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:unnamed protein product; PDBTitle: solution structure of rsgi ruh-056, a uba domain from mouse2 cdna 17 c1tr8A_ 85.3 27 PDB header:chaperone Chain: A: PDB Molecule:conserved protein (mth177); PDBTitle: crystal structure of archaeal nascent polypeptide-associated complex2 (aenac) 18 d1ufza_ 85.2 23 Fold:RuvA C-terminal domain-like Superfamily:HBS1-like domain Family:HBS1-like domain 19 c2cwbA_ 85.2 31 PDB header:protein binding Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin 20 d2dnaa1 84.8 25 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 21 c2jy5A_ not modelled 84.4 22 PDB header:signaling protein Chain: A: PDB Molecule:ubiquilin-1; PDBTitle: nmr structure of ubiquilin 1 uba domain 22 d1ifya_ not modelled 84.0 9 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 23 d1wiva_ not modelled 80.2 20 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 24 d1oaia_ not modelled 77.4 8 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 25 d1oqya1 not modelled 77.3 9 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 26 c2jp7A_ not modelled 67.9 10 PDB header:translation Chain: A: PDB Molecule:mrna export factor mex67; PDBTitle: nmr structure of the mex67 uba domain 27 d1go5a_ not modelled 65.4 8 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 28 c3bq3A_ not modelled 65.2 19 PDB header:cell cycle, ligase Chain: A: PDB Molecule:defective in cullin neddylation protein 1; PDBTitle: crystal structure of s. cerevisiae dcn1 29 c2dakA_ not modelled 62.5 23 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: solution structure of the second uba domain in the human2 ubiquitin specific protease 5 (isopeptidase 5) 30 d1vega_ not modelled 59.5 20 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 31 c2jz1A_ 57.4 42 PDB header:transcription Chain: A: PDB Molecule:protein doublesex; PDBTitle: dsx_long 32 c3agqA_ not modelled 53.3 22 PDB header:translation,transferase Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii 33 d1wgla_ not modelled 51.4 16 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 34 c1umqA_ not modelled 41.4 20 PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity 35 d1umqa_ not modelled 41.4 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 36 c2dalA_ not modelled 37.1 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein kiaa0794; PDBTitle: solution structure of the novel identified uba-like domain2 in the n-terminal of human fas associated factor 1 protein 37 d2g3qa1 not modelled 32.1 25 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 38 c2l2dA_ not modelled 30.3 19 PDB header:hydrolase Chain: A: PDB Molecule:otu domain-containing protein 7a; PDBTitle: solution nmr structure of human uba-like domain of otud7a_11_83, nesg2 target ht6304a/ocsp target otud7a_11_83/sgc-toronto 39 c2dhyA_ not modelled 29.8 16 PDB header:immune system Chain: A: PDB Molecule:cue domain-containing protein 1; PDBTitle: solution structure of the cue domain in the human cue2 domain containing protein 1 (cuedc1) 40 c3qsvD_ not modelled 28.0 22 PDB header:transcription/dna Chain: D: PDB Molecule:mothers against decapentaplegic homolog 4; PDBTitle: structural basis for dna recognition by constitutive smad4 mh1 dimers 41 d1b8za_ not modelled 28.0 23 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 42 d2dkla1 not modelled 23.5 20 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 43 d1mula_ not modelled 22.1 26 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 44 c2dagA_ not modelled 21.2 11 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: solution structure of the first uba domain in the human2 ubiquitin specific protease 5 (isopeptidase 5) 45 c2daiA_ not modelled 20.5 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin associated domain containing 1; PDBTitle: solution structure of the first uba domain in the human2 ubiquitin associated domain containing 1 (ubadc1) 46 c2l3gA_ not modelled 20.3 21 PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 7; PDBTitle: solution nmr structure of ch domain of rho guanine nucleotide exchange2 factor 7 from homo sapiens, northeast structural genomics consortium3 target hr4495e 47 c2damA_ not modelled 20.2 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:etea protein; PDBTitle: solution structure of the novel identified uba-like domain2 in the n-terminal of human etea protein 48 c2cfhD_ not modelled 20.2 15 PDB header:transport Chain: D: PDB Molecule:trafficking protein particle complex subunit 6b; PDBTitle: structure of the bet3-tpc6b core of trapp 49 c2dzlA_ not modelled 18.2 26 PDB header:structural genomics unknown function Chain: A: PDB Molecule:protein fam100b; PDBTitle: solution structure of the uba domain in human protein2 fam100b 50 d1fipa_ not modelled 17.3 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 51 c2iifA_ not modelled 17.2 17 PDB header:recombination/dna Chain: A: PDB Molecule:integration host factor; PDBTitle: single chain integration host factor mutant protein (scihf2-2 k45ae) in complex with dna 52 d1oiza1 not modelled 15.2 16 Fold:RuvA C-terminal domain-like Superfamily:CRAL/TRIO N-terminal domain Family:CRAL/TRIO N-terminal domain 53 c2f46A_ not modelled 13.7 18 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative phosphatase (nma1982) from neisseria2 meningitidis z2491 at 1.41 a resolution 54 c1auaA_ not modelled 12.5 15 PDB header:phospholipid-binding protein Chain: A: PDB Molecule:phosphatidylinositol transfer protein sec14p; PDBTitle: phosphatidylinositol transfer protein sec14p from2 saccharomyces cerevisiae 55 c1xopA_ not modelled 12.4 100 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin; PDBTitle: nmr structure of g1v mutant of influenza hemagglutinin2 fusion peptide in dpc micelles at ph 5 56 d2p06a1 not modelled 12.4 28 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:AF0060-like 57 c2p06A_ not modelled 12.4 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein af_0060; PDBTitle: crystal structure of a predicted coding region af_0060 from2 archaeoglobus fulgidus dsm 4304 58 c1xooA_ not modelled 12.4 100 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin; PDBTitle: nmr structure of g1s mutant of influenza hemagglutinin2 fusion peptide in dpc micelles at ph 5 59 c3g8qA_ not modelled 12.4 32 PDB header:rna binding protein Chain: A: PDB Molecule:predicted rna-binding protein, contains thump PDBTitle: a cytidine deaminase edits c-to-u in transfer rnas in2 archaea 60 c1oizA_ not modelled 11.6 15 PDB header:transport Chain: A: PDB Molecule:alpha-tocopherol transfer protein; PDBTitle: the molecular basis of vitamin e retention: structure of2 human alpha-tocopherol transfer protein 61 c2jrdA_ not modelled 11.4 100 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin; PDBTitle: influenza hemagglutinin fusion domain mutant f9a 62 c3c4iA_ not modelled 10.8 20 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding protein hu homolog; PDBTitle: crystal structure analysis of n terminal region containing the2 dimerization domain and dna binding domain of hu protein(histone like3 protein-dna binding) from mycobacterium tuberculosis [h37rv] 63 c2qhoF_ not modelled 10.5 23 PDB header:protein binding/ligase Chain: F: PDB Molecule:e3 ubiquitin-protein ligase edd1; PDBTitle: crystal structure of the uba domain from edd ubiquitin2 ligase in complex with ubiquitin 64 d1p71a_ not modelled 10.4 31 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 65 d1etxa_ not modelled 10.4 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 66 d2o97b1 not modelled 10.2 26 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 67 c1ibnA_ not modelled 9.7 100 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin ha2 chain peptide; PDBTitle: nmr structure of hemagglutinin fusion peptide in dpc2 micelles at ph 5 68 c1iboA_ not modelled 9.7 100 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin ha2 chain peptide; PDBTitle: nmr structure of hemagglutinin fusion peptide in dpc2 micelles at ph 7.4 69 d1veka_ not modelled 9.7 11 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 70 c3qheB_ not modelled 9.6 40 PDB header:signaling protein/splicing Chain: B: PDB Molecule:kh domain-containing, rna-binding, signal transduction- PDBTitle: crystal structure of the complex between the armadillo repeat domain2 of adenomatous polyposis coli and the tyrosine-rich domain of sam68 71 d1exea_ not modelled 9.5 14 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 72 d1huua_ not modelled 9.4 26 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 73 c2kq9A_ not modelled 9.3 36 PDB header:transcription Chain: A: PDB Molecule:dnak suppressor protein; PDBTitle: solution structure of dnak suppressor protein from2 agrobacterium tumefaciens c58. northeast structural3 genomics consortium target att12/ontario center for4 structural proteomics target atc0888 74 c3e21A_ not modelled 9.2 19 PDB header:apoptosis Chain: A: PDB Molecule:fas-associated factor 1; PDBTitle: crystal structure of faf-1 uba domain 75 c3ltiA_ not modelled 9.2 38 PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: crystal structure of the escherichia coli rna polymerase beta subunit2 beta2-betai4 domains 76 c3b7qA_ not modelled 9.1 20 PDB header:signaling protein Chain: A: PDB Molecule:uncharacterized protein ykl091c; PDBTitle: crystal structure of yeast sec14 homolog sfh1 in complex with2 phosphatidylcholine 77 d1oqya2 not modelled 9.0 13 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 78 d2crna1 not modelled 8.8 22 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 79 c2rd9C_ not modelled 8.6 22 PDB header:hydrolase Chain: C: PDB Molecule:bh0186 protein; PDBTitle: crystal structure of a putative yfit-like metal-dependent hydrolase2 (bh0186) from bacillus halodurans c-125 at 2.30 a resolution 80 c3e7lD_ not modelled 8.6 21 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain 81 c1z9eA_ not modelled 8.3 25 PDB header:protein binding/transcription Chain: A: PDB Molecule:pc4 and sfrs1 interacting protein 2; PDBTitle: solution structure of the hiv-1 integrase-binding domain in2 ledgf/p75 82 d1ntca_ not modelled 8.2 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 83 d2k0bx1 not modelled 8.0 32 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 84 c3iz6M_ not modelled 7.9 15 PDB header:ribosome Chain: M: PDB Molecule:40s ribosomal protein s18 (s13p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 85 d2b4jc1 not modelled 7.8 25 Fold:N-cbl like Superfamily:HIV integrase-binding domain Family:HIV integrase-binding domain 86 c3db3A_ not modelled 7.8 43 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1; PDBTitle: crystal structure of the tandem tudor domains of the e3 ubiquitin-2 protein ligase uhrf1 in complex with trimethylated histone h3-k93 peptide 87 c2zkqm_ not modelled 7.7 15 PDB header:ribosomal protein/rna Chain: M: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 88 d1olma1 not modelled 7.5 17 Fold:RuvA C-terminal domain-like Superfamily:CRAL/TRIO N-terminal domain Family:CRAL/TRIO N-terminal domain 89 d1hlva2 not modelled 7.4 7 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding 90 c1o5zA_ not modelled 7.3 30 PDB header:ligase Chain: A: PDB Molecule:folylpolyglutamate synthase/dihydrofolate synthase; PDBTitle: crystal structure of folylpolyglutamate synthase (tm0166) from2 thermotoga maritima at 2.10 a resolution 91 c2lahA_ not modelled 7.1 30 PDB header:cell cycle, apoptosis Chain: A: PDB Molecule:mitotic checkpoint serine/threonine-protein kinase bub1; PDBTitle: solution nmr structure of mitotic checkpoint serine/threonine-protein2 kinase bub1 n-terminal domain from homo sapiens, northeast structural3 genomics consortium target hr5460a (methods development) 92 d1tjla1 not modelled 6.8 20 Fold:Long alpha-hairpin Superfamily:DnaK suppressor protein DksA, alpha-hairpin domain Family:DnaK suppressor protein DksA, alpha-hairpin domain 93 c3hy5A_ not modelled 6.7 11 PDB header:transport protein Chain: A: PDB Molecule:retinaldehyde-binding protein 1; PDBTitle: crystal structure of cralbp 94 d1whca_ not modelled 6.6 23 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 95 d1iyca_ not modelled 6.4 40 Fold:Invertebrate chitin-binding proteins Superfamily:Invertebrate chitin-binding proteins Family:Antifungal peptide scarabaecin 96 c2jvwA_ not modelled 6.3 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of uncharacterized protein q5e7h1 from vibrio2 fischeri. northeast structural genomics target vfr117 97 c2xznM_ not modelled 6.3 23 PDB header:ribosome Chain: M: PDB Molecule:rps18e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 98 c2cpwA_ not modelled 6.3 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cbl-interacting protein sts-1 variant; PDBTitle: solution structure of rsgi ruh-031, a uba domain from human2 cdna 99 d1d1na_ not modelled 6.2 40 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors