Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3hy5A_

Fold library idPDB HeaderMoleculeTitle
c3hy5A_PDB header: transport proteinChain: A: PDB Molecule: retinaldehyde-binding protein 1;PDBTitle: crystal structure of cralbp


Added to library: Sat Aug 28 17:20:59 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKD
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)



GGGS

SSS




TTTTTT

TTTTTT
TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence SGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFN
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TTT


TTTSS

TSS
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFP
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
TT

TTTS
TT

TTS

TT

TTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGGTLPKYDGKAVA
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

S

TTTTTS
TT
TT
TTTTTTTS
GGGSBGGGTSSB
S

 ....
Sequence EQLF
Predicted secondary structure
SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D