Email l.a.kelley@imperial.ac.uk Description P0A890 Date Thu Jan 5 11:07:12 GMT 2012 Unique Job ID 31ac68ddcc113dc0

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1dcja_ 99.9 100 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 2 d1je3a_ 99.9 30 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 3 d1pava_ 99.8 27 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 4 d1jdqa_ 99.8 30 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 5 c3hz7A_ 99.8 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the sira-like protein (dsy4693) from2 desulfitobacterium hafniense, northeast structural genomics3 consortium target dhr2a 6 c1yg0A_ 90.5 22 PDB header:metal transport Chain: A: PDB Molecule:cop associated protein; PDBTitle: solution structure of apo-copp from helicobacter pylori 7 c1y3kA_ 86.0 13 PDB header:hydrolase Chain: A: PDB Molecule:copper-transporting atpase 1; PDBTitle: solution structure of the apo form of the fifth domain of2 menkes protein 8 d1p6ta1 82.0 20 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 9 d1p6ta2 79.7 15 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 10 d1kvja_ 78.4 14 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 11 c2gcfA_ 74.5 11 PDB header:hydrolase Chain: A: PDB Molecule:cation-transporting atpase pacs; PDBTitle: solution structure of the n-terminal domain of the coppper(i) atpase2 pacs in its apo form 12 d2d9ia1 73.0 12 Fold:IF3-like Superfamily:SMR domain-like Family:Smr domain 13 d1cc8a_ 72.9 11 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 14 c2kt2A_ 71.9 11 PDB header:oxidoreductase Chain: A: PDB Molecule:mercuric reductase; PDBTitle: structure of nmera, the n-terminal hma domain of tn501 mercuric2 reductase 15 c3qwuA_ 70.3 9 PDB header:ligase Chain: A: PDB Molecule:dna ligase; PDBTitle: putative atp-dependent dna ligase from aquifex aeolicus. 16 d2aw0a_ 70.3 12 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 17 d1q8la_ 70.2 10 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 18 c3grzA_ 68.3 12 PDB header:transferase Chain: A: PDB Molecule:ribosomal protein l11 methyltransferase; PDBTitle: crystal structure of ribosomal protein l11 methylase from2 lactobacillus delbrueckii subsp. bulgaricus 19 c2vkcA_ 64.9 13 PDB header:hydrolase Chain: A: PDB Molecule:nedd4-binding protein 2; PDBTitle: solution structure of the b3bp smr domain 20 d2ggpb1 64.8 12 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 21 d1s6ua_ not modelled 64.3 11 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 22 c2l3mA_ not modelled 61.4 21 PDB header:metal binding protein Chain: A: PDB Molecule:copper-ion-binding protein; PDBTitle: solution structure of the putative copper-ion-binding protein from2 bacillus anthracis str. ames 23 c1yjrA_ not modelled 60.0 17 PDB header:hydrolase Chain: A: PDB Molecule:copper-transporting atpase 1; PDBTitle: solution structure of the apo form of the sixth soluble2 domain a69p mutant of menkes protein 24 d2qifa1 not modelled 55.5 21 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 25 d1mwza_ not modelled 54.2 19 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 26 c2ldiA_ not modelled 51.7 13 PDB header:hydrolase Chain: A: PDB Molecule:zinc-transporting atpase; PDBTitle: nmr solution structure of ziaan sub mutant 27 c2kyzA_ not modelled 51.3 13 PDB header:metal binding protein Chain: A: PDB Molecule:heavy metal binding protein; PDBTitle: nmr structure of heavy metal binding protein tm0320 from thermotoga2 maritima 28 d1cpza_ not modelled 48.4 13 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 29 c3dxsX_ not modelled 48.2 14 PDB header:hydrolase Chain: X: PDB Molecule:copper-transporting atpase ran1; PDBTitle: crystal structure of a copper binding domain from hma7, a p-2 type atpase 30 c2aivA_ not modelled 47.3 12 PDB header:transport protein Chain: A: PDB Molecule:fragment of nucleoporin nup116/nsp116; PDBTitle: multiple conformations in the ligand-binding site of the2 yeast nuclear pore targeting domain of nup116p 31 d1osda_ not modelled 46.1 15 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 32 d2nxca1 not modelled 40.8 7 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Ribosomal protein L11 methyltransferase PrmA 33 c2ofhX_ not modelled 38.0 11 PDB header:hydrolase, membrane protein Chain: X: PDB Molecule:zinc-transporting atpase; PDBTitle: solution structure of the n-terminal domain of the zinc(ii) atpase2 ziaa in its apo form 34 c3nf5A_ not modelled 37.9 6 PDB header:protein transport Chain: A: PDB Molecule:nucleoporin nup116; PDBTitle: crystal structure of the c-terminal domain of nuclear pore complex2 component nup116 from candida glabrata 35 d1afia_ not modelled 36.9 19 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 36 d1sb6a_ not modelled 35.2 19 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 37 c1ko6A_ not modelled 34.9 0 PDB header:transferase Chain: A: PDB Molecule:nuclear pore complex protein nup98; PDBTitle: crystal structure of c-terminal autoproteolytic domain of2 nucleoporin nup98 38 c2q5xA_ not modelled 32.8 0 PDB header:protein transport Chain: A: PDB Molecule:nuclear pore complex protein nup98; PDBTitle: crystal structure of the c-terminal domain of hnup98 39 c2kkhA_ not modelled 32.4 13 PDB header:metal transport Chain: A: PDB Molecule:putative heavy metal transporter; PDBTitle: structure of the zinc binding domain of the atpase hma4 40 c3cg6A_ not modelled 30.6 23 PDB header:cell cycle Chain: A: PDB Molecule:growth arrest and dna-damage-inducible 45 gamma; PDBTitle: crystal structure of gadd45 gamma 41 c3kepA_ not modelled 29.7 6 PDB header:protein transport, rna binding protein Chain: A: PDB Molecule:nucleoporin nup145; PDBTitle: crystal structure of the autoproteolytic domain from the2 nuclear pore complex component nup145 from saccharomyces3 cerevisiae 42 c3qd7X_ not modelled 29.3 21 PDB header:hydrolase Chain: X: PDB Molecule:uncharacterized protein ydal; PDBTitle: crystal structure of ydal, a stand-alone small muts-related protein2 from escherichia coli 43 c2zqeA_ not modelled 27.4 21 PDB header:dna binding protein Chain: A: PDB Molecule:muts2 protein; PDBTitle: crystal structure of the smr domain of thermus thermophilus muts2 44 c2k2pA_ not modelled 25.4 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1203; PDBTitle: solution nmr structure of protein atu1203 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att10, ontario center for structural proteomics target atc1183 45 d1dusa_ not modelled 24.9 4 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Hypothetical protein MJ0882 46 d1fe0a_ not modelled 24.7 11 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 47 c3ntaA_ not modelled 24.4 11 PDB header:oxidoreductase Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide PDBTitle: structure of the shewanella loihica pv-4 nadh-dependent persulfide2 reductase 48 d1y8ca_ not modelled 23.9 24 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:CAC2371-like 49 d1uv7a_ not modelled 22.9 15 Fold:RRF/tRNA synthetase additional domain-like Superfamily:General secretion pathway protein M, EpsM Family:General secretion pathway protein M, EpsM 50 c1uv7A_ not modelled 22.9 15 PDB header:transport Chain: A: PDB Molecule:general secretion pathway protein m; PDBTitle: periplasmic domain of epsm from vibrio cholerae 51 d1wj4a_ not modelled 22.8 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:UBX domain 52 c2kngA_ not modelled 22.7 16 PDB header:dna binding protein Chain: A: PDB Molecule:protein lsr2; PDBTitle: solution structure of c-domain of lsr2 53 d1h8ca_ not modelled 20.5 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:UBX domain 54 c2rmlA_ not modelled 17.2 16 PDB header:hydrolase Chain: A: PDB Molecule:copper-transporting p-type atpase copa; PDBTitle: solution structure of the n-terminal soluble domains of2 bacillus subtilis copa 55 d2cr5a1 not modelled 17.1 7 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:UBX domain 56 d1jvaa3 not modelled 17.1 9 Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Intein endonuclease 57 c2rogA_ not modelled 16.2 18 PDB header:metal binding protein Chain: A: PDB Molecule:heavy metal binding protein; PDBTitle: solution structure of thermus thermophilus hb8 ttha17182 protein in living e. coli cells 58 c3fpnB_ not modelled 16.1 3 PDB header:dna binding protein Chain: B: PDB Molecule:geobacillus stearothermophilus uvrb interaction PDBTitle: crystal structure of uvra-uvrb interaction domains 59 c2ziuA_ not modelled 15.8 8 PDB header:hydrolase Chain: A: PDB Molecule:mus81 protein; PDBTitle: crystal structure of the mus81-eme1 complex 60 d2cc0a1 not modelled 15.1 11 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 61 d1i42a_ not modelled 13.2 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:UBX domain 62 c3qq5A_ not modelled 12.1 17 PDB header:oxidoreductase Chain: A: PDB Molecule:small gtp-binding protein; PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf 63 c3icrA_ not modelled 11.7 7 PDB header:oxidoreductase Chain: A: PDB Molecule:coenzyme a-disulfide reductase; PDBTitle: crystal structure of oxidized bacillus anthracis coadr-rhd 64 c3dlcA_ not modelled 11.3 6 PDB header:transferase Chain: A: PDB Molecule:putative s-adenosyl-l-methionine-dependent PDBTitle: crystal structure of a putative s-adenosyl-l-methionine-dependent2 methyltransferase (mmp1179) from methanococcus maripaludis at 1.15 a3 resolution 65 d1j23a_ not modelled 11.1 14 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:XPF/Rad1/Mus81 nuclease 66 c3ndjA_ not modelled 11.1 24 PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product 67 d1l3ia_ not modelled 11.0 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Precorrin-6Y methyltransferase (CbiT) 68 c2jraB_ not modelled 10.9 9 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein rpa2121; PDBTitle: a novel domain-swapped solution nmr structure of protein rpa2121 from2 rhodopseudomonas palustris. northeast structural genomics target rpt6 69 c2ga7A_ not modelled 10.9 13 PDB header:hydrolase Chain: A: PDB Molecule:copper-transporting atpase 1; PDBTitle: solution structure of the copper(i) form of the third metal-2 binding domain of atp7a protein (menkes disease protein) 70 d2naca2 not modelled 10.8 15 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain 71 c3lteH_ not modelled 10.8 14 PDB header:transcription Chain: H: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator (signal receiver domain) from2 bermanella marisrubri 72 d2obba1 not modelled 10.3 15 Fold:HAD-like Superfamily:HAD-like Family:BT0820-like 73 c2pwyB_ not modelled 10.0 13 PDB header:transferase Chain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a m1a58 trna methyltransferase 74 c2kxjA_ not modelled 9.4 11 PDB header:protein binding Chain: A: PDB Molecule:ubx domain-containing protein 4; PDBTitle: solution structure of ubx domain of human ubxd2 protein 75 c3fryB_ not modelled 9.3 18 PDB header:hydrolase Chain: B: PDB Molecule:probable copper-exporting p-type atpase a; PDBTitle: crystal structure of the copa c-terminal metal binding domain 76 c2zpmA_ not modelled 9.3 13 PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain b 77 c3d00A_ not modelled 9.1 22 PDB header:metal binding protein Chain: A: PDB Molecule:tungsten formylmethanofuran dehydrogenase subunit e; PDBTitle: crystal structure of a tungsten formylmethanofuran dehydrogenase2 subunit e (fmde)-like protein (syn_00638) from syntrophus3 aciditrophicus at 1.90 a resolution 78 c2eseA_ not modelled 8.9 22 PDB header:protein/rna complex Chain: A: PDB Molecule:vts1p; PDBTitle: structure of the sam domain of vts1p in complex with rna 79 c2b6gA_ not modelled 8.8 22 PDB header:rna binding protein Chain: A: PDB Molecule:vts1p; PDBTitle: rna recognition by the vts1 sam domain 80 d1s3sg_ not modelled 8.5 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:UBX domain 81 c2ropA_ not modelled 8.3 11 PDB header:hydrolase Chain: A: PDB Molecule:copper-transporting atpase 2; PDBTitle: solution structure of domains 3 and 4 of human atp7b 82 c3evzA_ not modelled 8.1 13 PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: crystal strucure of methyltransferase from pyrococcus furiosus 83 d2bgwa2 not modelled 8.0 13 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:XPF/Rad1/Mus81 nuclease 84 c3iz6A_ not modelled 7.8 8 PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein sa (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 85 d2b2na1 not modelled 7.6 8 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 86 c3hm2G_ not modelled 7.5 7 PDB header:transferase Chain: G: PDB Molecule:precorrin-6y c5,15-methyltransferase; PDBTitle: crystal structure of putative precorrin-6y c5,15-2 methyltransferase targeted domain from corynebacterium3 diphtheriae 87 c3njrB_ not modelled 7.1 10 PDB header:transferase Chain: B: PDB Molecule:precorrin-6y methylase; PDBTitle: crystal structure of c-terminal domain of precorrin-6y c5,15-2 methyltransferase from rhodobacter capsulatus 88 c3c5yD_ not modelled 7.0 10 PDB header:isomerase Chain: D: PDB Molecule:ribose/galactose isomerase; PDBTitle: crystal structure of a putative ribose 5-phosphate isomerase2 (saro_3514) from novosphingobium aromaticivorans dsm at 1.81 a3 resolution 89 d1o54a_ not modelled 6.7 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:tRNA(1-methyladenosine) methyltransferase-like 90 d1qupa2 not modelled 6.4 16 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 91 c2dzkA_ not modelled 6.4 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubx domain-containing protein 2; PDBTitle: structure of the ubx domain in mouse ubx domain-containing2 protein 2 92 c3hjhA_ not modelled 6.3 8 PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair-coupling factor; PDBTitle: a rigid n-terminal clamp restrains the motor domains of the bacterial2 transcription-repair coupling factor 93 c3mruB_ not modelled 6.1 16 PDB header:hydrolase Chain: B: PDB Molecule:aminoacyl-histidine dipeptidase; PDBTitle: crystal structure of aminoacylhistidine dipeptidase from vibrio2 alginolyticus 94 c3fpnA_ not modelled 5.9 8 PDB header:dna binding protein Chain: A: PDB Molecule:geobacillus stearothermophilus uvra interaction PDBTitle: crystal structure of uvra-uvrb interaction domains 95 c2aj1A_ not modelled 5.9 14 PDB header:hydrolase Chain: A: PDB Molecule:probable cadmium-transporting atpase; PDBTitle: solution structure of apocada 96 d2b25a1 not modelled 5.8 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:tRNA(1-methyladenosine) methyltransferase-like 97 d1u0sy_ not modelled 5.7 23 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 98 c2rpiA_ not modelled 5.7 6 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease h; PDBTitle: the nmr structure of the submillisecond folding2 intermediate of the thermus thermophilus ribonuclease h 99 d2ciwa1 not modelled 5.6 38 Fold:EF Hand-like Superfamily:Cloroperoxidase Family:Cloroperoxidase