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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1ko6A_

Fold library idPDB HeaderMoleculeTitle
c1ko6A_PDB header: transferaseChain: A: PDB Molecule: nuclear pore complex protein nup98;PDBTitle: crystal structure of c-terminal autoproteolytic domain of2 nucleoporin nup98


Added to library: Tue Mar 16 12:44:15 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MHPAGIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKE
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Known secondary structure (DSSP)

SS

B

STTS
S
TTS

SSTTT
S

TT
BTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRP
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Known secondary structure (DSSP) SSSTTS


TTSTTSS

S




TTT
S



TTT
G
 .........150..
Sequence ETGSWVFKVSHF
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Known secondary structure (DSSP) GGTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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