Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2q5xA_

Fold library idPDB HeaderMoleculeTitle
c2q5xA_PDB header: protein transportChain: A: PDB Molecule: nuclear pore complex protein nup98;PDBTitle: crystal structure of the c-terminal domain of hnup98


Added to library: Tue Mar 16 14:37:40 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVVVY
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)

B

STTS
S
TTS

TTT
TT
BTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFK
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)



TTBTTBS

S


B
TTT

B


TTTT
TTTT
 .........150.
Sequence VSHFAKYGLQD
Predicted secondary structure






SS confidence










Known secondary structure (DSSP) SS
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D