Email l.a.kelley@imperial.ac.uk Description P0ACD8 Date Thu Jan 5 11:17:58 GMT 2012 Unique Job ID 20f380c742b8e503

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3myrB_ 100.0 54 PDB header:oxidoreductase Chain: B: PDB Molecule:nickel-dependent hydrogenase large subunit; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state 2 d1e3db_ 100.0 45 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 3 d1frfl_ 100.0 45 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 4 c1h2aL_ 100.0 44 PDB header:oxidoreductase Chain: L: PDB Molecule:hydrogenase; PDBTitle: single crystals of hydrogenase from desulfovibrio vulgaris 5 d1wuil1 100.0 43 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 6 d1yq9h1 100.0 46 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 7 d1cc1l_ 100.0 34 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 8 c2wpnB_ 100.0 35 PDB header:oxidoreductase Chain: B: PDB Molecule:periplasmic [nifese] hydrogenase, large subunit, PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough 9 c2fug4_ 100.0 22 PDB header:oxidoreductase Chain: 4: PDB Molecule:nadh-quinone oxidoreductase chain 4; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 10 d2fug41 100.0 22 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nqo4-like 11 d1ffvc1 74.7 18 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 12 d1yeya2 63.2 11 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 13 d1v97a4 56.0 6 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 14 d1t3qc1 55.0 10 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 15 d1iyxa2 52.6 21 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 16 d1vqza1 52.1 22 Fold:SufE/NifU Superfamily:SufE/NifU Family:SP1160 C-terminal domain-like 17 c1vqzA_ 49.5 17 PDB header:ligase Chain: A: PDB Molecule:lipoate-protein ligase, putative; PDBTitle: crystal structure of a putative lipoate-protein ligase a (sp_1160)2 from streptococcus pneumoniae tigr4 at 1.99 a resolution 18 d1n62c1 47.1 21 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 19 c1xx3A_ 46.9 18 PDB header:transport protein Chain: A: PDB Molecule:tonb protein; PDBTitle: solution structure of escherichia coli tonb-ctd 20 d1jdfa2 46.3 11 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 21 c2dgyA_ not modelled 45.8 15 PDB header:translation Chain: A: PDB Molecule:mgc11102 protein; PDBTitle: solution structure of the eukaryotic initiation factor 1a2 in mgc11102 protein 22 d1rvka2 not modelled 42.5 16 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 23 d1jroa3 not modelled 39.9 19 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 24 c2grxC_ not modelled 39.2 18 PDB header:metal transport Chain: C: PDB Molecule:protein tonb; PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome 25 d2ntka1 not modelled 37.3 27 Fold:Ntn hydrolase-like Superfamily:Archaeal IMP cyclohydrolase PurO Family:Archaeal IMP cyclohydrolase PurO 26 d1x2ga1 not modelled 35.7 22 Fold:SufE/NifU Superfamily:SufE/NifU Family:SP1160 C-terminal domain-like 27 d2gskb1 not modelled 35.5 18 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 28 d2gjxa2 not modelled 34.8 29 Fold:Zincin-like Superfamily:beta-N-acetylhexosaminidase-like domain Family:beta-N-acetylhexosaminidase domain 29 c1ufiD_ not modelled 33.9 20 PDB header:dna binding protein Chain: D: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of the dimerization domain of human cenp-b 30 d1ufia_ not modelled 33.7 20 Fold:ROP-like Superfamily:Dimerisation domain of CENP-B Family:Dimerisation domain of CENP-B 31 d1u07a_ not modelled 33.5 21 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 32 c2oqkA_ not modelled 31.0 21 PDB header:translation Chain: A: PDB Molecule:putative translation initiation factor eif-1a; PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a 33 c2dnwA_ not modelled 30.7 19 PDB header:transport protein Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: solution structure of rsgi ruh-059, an acp domain of acyl2 carrier protein, mitochondrial [precursor] from human cdna 34 d1wfza_ not modelled 28.9 20 Fold:SufE/NifU Superfamily:SufE/NifU Family:NifU/IscU domain 35 c2xzn5_ not modelled 27.3 43 PDB header:ribosome Chain: 5: PDB Molecule:ribosomal protein s26e containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 36 c3u5ga_ not modelled 27.1 43 PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution 37 c3b42B_ not modelled 24.2 26 PDB header:signaling protein Chain: B: PDB Molecule:methyl-accepting chemotaxis protein, putative; PDBTitle: periplasmic sensor domain of chemotaxis protein gsu0935 38 d1hcza2 not modelled 23.4 26 Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain 39 c3sc0A_ not modelled 23.0 63 PDB header:oxidoreductase Chain: A: PDB Molecule:methylmalonic aciduria and homocystinuria type c protein; PDBTitle: crystal structure of mmachc (1-238), a human b12 processing enzyme,2 complexed with methylcobalamin 40 d1nowa2 not modelled 23.0 21 Fold:Zincin-like Superfamily:beta-N-acetylhexosaminidase-like domain Family:beta-N-acetylhexosaminidase domain 41 d2chra2 not modelled 23.0 26 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 42 d2cbia3 not modelled 22.7 18 Fold:Zincin-like Superfamily:beta-N-acetylhexosaminidase-like domain Family:Hyaluronidase N-terminal domain-like 43 d1rm6b1 not modelled 22.1 19 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:CO dehydrogenase flavoprotein C-terminal domain-like Family:CO dehydrogenase flavoprotein C-terminal domain-like 44 c3j0iF_ not modelled 21.6 33 PDB header:structural protein Chain: F: PDB Molecule:phikz029; PDBTitle: fitting of the phikz gp29pr structure into the cryo-em density map of2 the phikz polysheath 45 c3g0kA_ not modelled 21.3 24 PDB header:ca-binding protein Chain: A: PDB Molecule:putative membrane protein; PDBTitle: crystal structure of a protein of unknown function with a cystatin-2 like fold (saro_2880) from novosphingobium aromaticivorans dsm at3 1.30 a resolution 46 c3nxlD_ not modelled 21.3 15 PDB header:lyase Chain: D: PDB Molecule:glucarate dehydratase; PDBTitle: crystal structure of glucarate dehydratase from burkholderia cepacia2 complexed with magnesium 47 c1y7jA_ not modelled 21.1 67 PDB header:signaling protein Chain: A: PDB Molecule:agouti signaling protein; PDBTitle: nmr structure family of human agouti signalling protein (80-2 132: q115y, s124y) 48 c3b4oB_ not modelled 21.1 27 PDB header:biosynthetic protein Chain: B: PDB Molecule:phenazine biosynthesis protein a/b; PDBTitle: crystal structure of phenazine biosynthesis protein phza/b2 from burkholderia cepacia r18194, apo form 49 c2k9kA_ not modelled 20.9 15 PDB header:metal transport Chain: A: PDB Molecule:tonb2; PDBTitle: molecular characterization of the tonb2 protein from vibrio2 anguillarum 50 c2e5aA_ not modelled 18.7 11 PDB header:ligase Chain: A: PDB Molecule:lipoyltransferase 1; PDBTitle: crystal structure of bovine lipoyltransferase in complex2 with lipoyl-amp 51 c3f40A_ not modelled 18.6 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized ntf2-like protein; PDBTitle: crystal structure of ntf2-like protein of unknown function2 (yp_677363.1) from cytophaga hutchinsonii atcc 33406 at3 1.27 a resolution 52 d1qbaa4 not modelled 17.4 25 Fold:Zincin-like Superfamily:beta-N-acetylhexosaminidase-like domain Family:beta-N-acetylhexosaminidase domain 53 c1n62C_ not modelled 17.3 17 PDB header:oxidoreductase Chain: C: PDB Molecule:carbon monoxide dehydrogenase medium chain; PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state 54 d1h9aa2 not modelled 16.7 12 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:Glucose 6-phosphate dehydrogenase-like 55 d1d7qa_ not modelled 15.9 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 56 d1qkia2 not modelled 15.8 24 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:Glucose 6-phosphate dehydrogenase-like 57 c2nytB_ not modelled 15.7 56 PDB header:hydrolase Chain: B: PDB Molecule:probable c->u-editing enzyme apobec-2; PDBTitle: the apobec2 crystal structure and functional implications2 for aid 58 d1jt8a_ not modelled 15.2 27 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 59 c1grjA_ not modelled 15.0 10 PDB header:transcription regulation Chain: A: PDB Molecule:grea protein; PDBTitle: grea transcript cleavage factor from escherichia coli 60 d2q22a1 not modelled 14.8 36 Fold:Ava3019-like Superfamily:Ava3019-like Family:Ava3019-like 61 c3bjsB_ not modelled 14.7 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from polaromonas2 sp. js666 62 c3hk4B_ not modelled 14.7 18 PDB header:lyase Chain: B: PDB Molecule:mlr7391 protein; PDBTitle: crystal structure of a putative snoal-like polyketide cyclase2 [carbohydrate phosphatase] (mlr7391) from mesorhizobium loti at 1.963 a resolution 63 c2l4bA_ not modelled 14.5 6 PDB header:transferase Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: solution structure of a putative acyl carrier protein from anaplasma2 phagocytophilum. seattle structural genomics center for infectious3 disease target anpha.01018.a 64 c2fq2A_ not modelled 14.0 14 PDB header:lipid transport Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: solution structure of minor conformation of holo-acyl2 carrier protein from malaria parasite plasmodium falciparum 65 c2kboA_ not modelled 13.5 44 PDB header:hydrolase Chain: A: PDB Molecule:dna dc->du-editing enzyme apobec-3g; PDBTitle: structure, interaction, and real-time monitoring of the2 enzymatic reaction of wild type apobec3g 66 d1ihra_ not modelled 13.5 18 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 67 c3ff0A_ not modelled 13.2 36 PDB header:biosynthetic protein Chain: A: PDB Molecule:phenazine biosynthesis protein phzb 2; PDBTitle: crystal structure of a phenazine biosynthesis-related protein (phzb2)2 from pseudomonas aeruginosa at 1.90 a resolution 68 c2l9fA_ not modelled 12.8 12 PDB header:transferase Chain: A: PDB Molecule:cale8; PDBTitle: nmr solution structure of meacp 69 d1jpma2 not modelled 12.8 18 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 70 d3dm8a1 not modelled 12.7 14 Fold:Cystatin-like Superfamily:NTF2-like Family:Rpa4348-like 71 c2v3jA_ not modelled 12.5 20 PDB header:ribosomal protein Chain: A: PDB Molecule:essential for mitotic growth 1; PDBTitle: the yeast ribosome synthesis factor emg1 alpha beta knot2 fold methyltransferase 72 d1t8ka_ not modelled 12.5 22 Fold:Acyl carrier protein-like Superfamily:ACP-like Family:Acyl-carrier protein (ACP) 73 d2choa3 not modelled 12.3 11 Fold:Zincin-like Superfamily:beta-N-acetylhexosaminidase-like domain Family:Hyaluronidase N-terminal domain-like 74 c1x3oA_ not modelled 12.2 21 PDB header:lipid transport Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: crystal structure of the acyl carrier protein from thermus2 thermophilus hb8 75 c3b47A_ not modelled 12.0 18 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: periplasmic sensor domain of chemotaxis protein gsu0582 76 c3f14A_ not modelled 11.9 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized ntf2-like protein; PDBTitle: crystal structure of ntf2-like protein of unknown function2 (yp_680363.1) from cytophaga hutchinsonii atcc 33406 at 1.45 a3 resolution 77 c2w3rG_ not modelled 11.5 19 PDB header:oxidoreductase Chain: G: PDB Molecule:xanthine dehydrogenase; PDBTitle: crystal structure of xanthine dehydrogenase (desulfo form)2 from rhodobacter capsulatus in complex with hypoxanthine 78 c2nqlB_ not modelled 11.5 18 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of a member of the enolase superfamily from2 agrobacterium tumefaciens 79 c1puoA_ not modelled 11.4 17 PDB header:allergen Chain: A: PDB Molecule:major allergen i polypeptide, fused chain 2, PDBTitle: crystal structure of fel d 1- the major cat allergen 80 c1qkiE_ not modelled 11.4 24 PDB header:oxidoreductase Chain: E: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose 6-phosphate dehydrogenase2 (variant canton r459l) complexed with structural nadp+ 81 c1j73C_ not modelled 11.4 22 PDB header:hormone/growth factor Chain: C: PDB Molecule:insulin a; PDBTitle: crystal structure of an unstable insulin analog with native activity. 82 c1j73A_ not modelled 11.4 22 PDB header:hormone/growth factor Chain: A: PDB Molecule:insulin a; PDBTitle: crystal structure of an unstable insulin analog with native activity. 83 d2gdqa2 not modelled 11.4 16 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 84 d2bs2b2 not modelled 11.3 30 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 85 c3fq9A_ not modelled 11.2 22 PDB header:hormone Chain: A: PDB Molecule:insulin; PDBTitle: design of an insulin analog with enhanced receptor-binding2 selectivity. rationale, structure, and therapeutic3 implications 86 c3fq9C_ not modelled 11.2 22 PDB header:hormone Chain: C: PDB Molecule:insulin; PDBTitle: design of an insulin analog with enhanced receptor-binding2 selectivity. rationale, structure, and therapeutic3 implications 87 d1r9pa_ not modelled 11.1 16 Fold:SufE/NifU Superfamily:SufE/NifU Family:NifU/IscU domain 88 c2bhlB_ not modelled 11.1 24 PDB header:oxidoreductase (choh(d)-nadp) Chain: B: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose-6-phosphate dehydrogenase2 (deletion variant) complexed with glucose-6-phosphate 89 c3ewnA_ not modelled 11.1 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:thij/pfpi family protein; PDBTitle: crystal structure of a thij/pfpi family protein from pseudomonas2 syringae 90 d2e1ba2 not modelled 11.0 36 Fold:RRF/tRNA synthetase additional domain-like Superfamily:ThrRS/AlaRS common domain Family:AlaX-like 91 d2r4qa1 not modelled 10.7 18 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Fructose specific IIB subunit-like 92 c2qq4A_ not modelled 10.6 15 PDB header:metal binding protein Chain: A: PDB Molecule:iron-sulfur cluster biosynthesis protein iscu; PDBTitle: crystal structure of iron-sulfur cluster biosynthesis2 protein iscu (ttha1736) from thermus thermophilus hb8 93 d1grja2 not modelled 10.6 10 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 94 c3gwnA_ not modelled 10.5 22 PDB header:oxidoreductase Chain: A: PDB Molecule:probable fad-linked sulfhydryl oxidase r596; PDBTitle: crystal structure of the fad binding domain from mimivirus sulfhydryl2 oxidase r596 95 c3grdA_ not modelled 10.4 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized ntf2-superfamily protein; PDBTitle: crystal structure of ntf2-superfamily protein with unknown2 function (np_977240.1) from bacillus cereus atcc 10987 at3 1.25 a resolution 96 c3fgyB_ not modelled 10.3 12 PDB header:unknown function Chain: B: PDB Molecule:uncharacterized ntf2-like protein; PDBTitle: crystal structure of a ntf2-like protein (bxe_b1094) from burkholderia2 xenovorans lb400 at 1.59 a resolution 97 d1o98a1 not modelled 10.3 42 Fold:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Superfamily:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Family:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain 98 c3bboL_ not modelled 10.3 11 PDB header:ribosome Chain: L: PDB Molecule:ribosomal protein l13; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 99 d1n62a2 not modelled 10.2 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins