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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3bboL_ | PDB header: ribosome | Chain: L: PDB Molecule: ribosomal protein l13; | PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome |
Added to library: Tue Mar 16 12:40:49 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | K | K | W | Y | V | V | D | A | T | D | L | I | L | G | R | M | A | S | T | I | A | I | H | I | R | G | K | N | L | A | S | Y | T | P | S | V | D | M | G | A | F | V | I | V | V | N | A | D | K | V | A | V | S | G | K | K | R | T | Q | K | L | Y | R | R | H | S | G | R | P | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | T | T | T | T | T | T | T | S | S | ![]() | ![]() | S | S | S | S | G | G | G | G | T | B | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Sequence | G | L | K | E | E | T | F | D | Q | L | Q | K | R | I | P | E | R | I | I | E | H | A | V | R | G | M | L | P | K | G | R | L | G | R | Y | L | F | N | H | L | K | V | Y | K | G | A | E | H | P | H | Q | A | Q | Q | P | |||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | ![]() | ![]() | ![]() | ![]() | T | T | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | T | T | S |
Download: | PDB structure | FASTA sequence |
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