Email l.a.kelley@imperial.ac.uk Description P12008 Date Thu Jan 5 11:33:05 GMT 2012 Unique Job ID 1570647b1cba0885

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1um0a_ 100.0 45 Fold:Chorismate synthase, AroC Superfamily:Chorismate synthase, AroC Family:Chorismate synthase, AroC 2 d1qxoa_ 100.0 38 Fold:Chorismate synthase, AroC Superfamily:Chorismate synthase, AroC Family:Chorismate synthase, AroC 3 c1ztbA_ 100.0 38 PDB header:ligase Chain: A: PDB Molecule:chorismate synthase; PDBTitle: crystal structure of chorismate synthase from mycobacterium2 tuberculosis 4 d1q1la_ 100.0 41 Fold:Chorismate synthase, AroC Superfamily:Chorismate synthase, AroC Family:Chorismate synthase, AroC 5 d1sq1a_ 100.0 45 Fold:Chorismate synthase, AroC Superfamily:Chorismate synthase, AroC Family:Chorismate synthase, AroC 6 d1r53a_ 100.0 51 Fold:Chorismate synthase, AroC Superfamily:Chorismate synthase, AroC Family:Chorismate synthase, AroC 7 c2k1hA_ 76.4 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ser13; PDBTitle: solution nmr structure of ser13 from staphylococcus epidermidis.2 northeast structural genomics consortium target ser13 8 d2ffma1 73.0 13 Fold:Hypothetical protein SAV1430 Superfamily:Hypothetical protein SAV1430 Family:Hypothetical protein SAV1430 9 c3r3sD_ 61.2 15 PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase; PDBTitle: structure of the ygha oxidoreductase from salmonella enterica 10 d1o4va_ 61.1 25 Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11 c3lp6D_ 58.6 31 PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit; PDBTitle: crystal structure of rv3275c-e60a from mycobacterium tuberculosis at2 1.7a resolution 12 d1qcza_ 54.8 21 Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 13 c1m1gB_ 53.4 28 PDB header:transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: crystal structure of aquifex aeolicus n-utilization2 substance g (nusg), space group p2(1) 14 d1xmpa_ 44.9 23 Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 15 c2ekmC_ 40.6 24 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein st1511; PDBTitle: structure of st1219 protein from sulfolobus tokodaii 16 d1vgga_ 39.1 23 Fold:Ta1353-like Superfamily:Ta1353-like Family:Ta1353-like 17 c3trhI_ 35.4 24 PDB header:lyase Chain: I: PDB Molecule:phosphoribosylaminoimidazole carboxylase PDBTitle: structure of a phosphoribosylaminoimidazole carboxylase catalytic2 subunit (pure) from coxiella burnetii 18 c2xznF_ 35.4 13 PDB header:ribosome Chain: F: PDB Molecule:eif1; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 19 c2lhuA_ 32.7 27 PDB header:structural protein Chain: A: PDB Molecule:mybpc3 protein; PDBTitle: structural insight into the unique cardiac myosin binding protein-c2 motif: a partially folded domain 20 d1ciya1 31.1 33 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 21 d1ji6a1 not modelled 29.3 24 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 22 c2d16B_ not modelled 27.9 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ph1918; PDBTitle: crystal structure of ph1918 protein from pyrococcus horikoshii ot3 23 c3orsD_ not modelled 26.5 16 PDB header:isomerase,biosynthetic protein Chain: D: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase; PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide mutase2 from staphylococcus aureus 24 c3rggD_ not modelled 23.0 14 PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air 25 d1dlca1 not modelled 22.6 29 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 26 d1qlwa_ not modelled 22.6 28 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:A novel bacterial esterase 27 c2ywxA_ not modelled 17.8 28 PDB header:lyase Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit; PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase2 catalytic subunit from methanocaldococcus jannaschii 28 d2za7a1 not modelled 16.0 42 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 29 d1z6om1 not modelled 15.9 32 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 30 c2w3pB_ not modelled 13.9 21 PDB header:lyase Chain: B: PDB Molecule:benzoyl-coa-dihydrodiol lyase; PDBTitle: boxc crystal structure 31 c2ejeA_ not modelled 13.7 50 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i; PDBTitle: solution structure of rsgi ruh-071, a gtf2i domain in human2 cdna 32 c3mcaB_ not modelled 13.1 20 PDB header:translation regulation/hydrolase Chain: B: PDB Molecule:protein dom34; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay 33 c2dn5A_ not modelled 13.0 42 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i repeat domain- PDBTitle: solution structure of rsgi ruh-057, a gtf2i domain in human2 cdna 34 c2a73B_ not modelled 12.7 16 PDB header:immune system Chain: B: PDB Molecule:complement c3; PDBTitle: human complement component c3 35 c2dzrA_ not modelled 12.3 58 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i repeat domain- PDBTitle: solution structure of rsgi ruh-067, a gtf2i domain in human2 cdna 36 d1q60a_ not modelled 12.1 42 Fold:GTF2I-like repeat Superfamily:GTF2I-like repeat Family:GTF2I-like repeat 37 c2d99A_ not modelled 12.1 33 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i repeat domain- PDBTitle: solution structure of rsgi ruh-048, a gtf2i domain in human2 cdna 38 c1w99A_ not modelled 12.1 24 PDB header:toxin Chain: A: PDB Molecule:pesticidial crystal protein cry4ba; PDBTitle: mosquito-larvicidal toxin cry4ba from bacillus2 thuringiensis ssp. israelensis 39 c3b8hA_ not modelled 11.9 50 PDB header:biosynthetic protein/transferase Chain: A: PDB Molecule:elongation factor 2; PDBTitle: structure of the eef2-exoa(e546a)-nad+ complex 40 c2dn4A_ not modelled 11.7 50 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i; PDBTitle: solution structure of rsgi ruh-060, a gtf2i domain in human2 cdna 41 d1r03a_ not modelled 11.4 43 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 42 d1g9pa_ not modelled 11.3 100 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:omega toxin-like Family:Spider toxins 43 c1g9pA_ not modelled 11.3 100 PDB header:toxin Chain: A: PDB Molecule:omega-atracotoxin-hv2a; PDBTitle: solution structure of the insecticidal calcium channel2 blocker omega-atracotoxin-hv2a 44 c2c9kA_ not modelled 11.1 38 PDB header:toxin Chain: A: PDB Molecule:pesticidal crystal protein cry4aa; PDBTitle: structure of the functional form of the mosquito-larvicidal2 cry4aa toxin from bacillus thuringiensis at 2.8 a3 resolution 45 c2k4mA_ not modelled 11.1 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0146 protein mth_1000; PDBTitle: solution nmr structure of m. thermoautotrophicum protein2 mth_1000, northeast structural genomics consortium target3 tr8 46 c2e3lA_ not modelled 10.8 33 PDB header:transcription Chain: A: PDB Molecule:transcription factor gtf2ird2 beta; PDBTitle: solution structure of rsgi ruh-068, a gtf2i domain in human2 cdna 47 c2ed2A_ not modelled 10.7 42 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i; PDBTitle: solution structure of rsgi ruh-069, a gtf2i domain in human2 cdna 48 d2ceia1 not modelled 10.5 40 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 49 c2dzqA_ not modelled 10.4 50 PDB header:transcription Chain: A: PDB Molecule:general transcription factor ii-i repeat domain- PDBTitle: solution structure of rsgi ruh-066, a gtf2i domain in human2 cdna 50 d1rcda_ not modelled 10.0 32 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 51 d1x52a1 not modelled 9.7 19 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:ERF1/Dom34 C-terminal domain-like 52 d2fzcb1 not modelled 9.3 30 Fold:Ferredoxin-like Superfamily:Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Family:Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain 53 c2h3eB_ not modelled 8.7 28 PDB header:transferase Chain: B: PDB Molecule:aspartate carbamoyltransferase regulatory chain; PDBTitle: structure of wild-type e. coli aspartate transcarbamoylase in the2 presence of n-phosphonacetyl-l-isoasparagine at 2.3a resolution 54 d1pg5b1 not modelled 8.6 40 Fold:Ferredoxin-like Superfamily:Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Family:Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain 55 d1nz9a_ not modelled 8.6 53 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 56 c2b39B_ not modelled 8.5 17 PDB header:immune system Chain: B: PDB Molecule:c3; PDBTitle: structure of mammalian c3 with an intact thioester at 3a resolution 57 c3izq1_ not modelled 8.3 33 PDB header:ribosomal protein,hydrolase Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome 58 c3degC_ not modelled 8.1 26 PDB header:ribosome Chain: C: PDB Molecule:gtp-binding protein lepa; PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp 59 d2do3a1 not modelled 8.1 47 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:SPT5 KOW domain-like 60 c2be7E_ not modelled 7.9 15 PDB header:transferase Chain: E: PDB Molecule:aspartate carbamoyltransferase regulatory chain; PDBTitle: crystal structure of the unliganded (t-state) aspartate2 transcarbamoylase of the psychrophilic bacterium moritella profunda 61 c1pg5B_ not modelled 7.7 40 PDB header:transferase Chain: B: PDB Molecule:aspartate carbamoyltransferase regulatory chain; PDBTitle: crystal structure of the unligated (t-state) aspartate2 transcarbamoylase from the extremely thermophilic archaeon sulfolobus3 acidocaldarius 62 c2oghA_ not modelled 7.7 13 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor eif-1; PDBTitle: solution structure of yeast eif1 63 c2ywfA_ not modelled 7.6 24 PDB header:translation Chain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus 64 c3bdeA_ not modelled 7.2 19 PDB header:unknown function Chain: A: PDB Molecule:mll5499 protein; PDBTitle: crystal structure of a dabb family protein with a ferredoxin-like fold2 (mll5499) from mesorhizobium loti maff303099 at 1.79 a resolution 65 c2xg8D_ not modelled 7.2 38 PDB header:transcription Chain: D: PDB Molecule:pipx; PDBTitle: structural basis of gene regulation by protein pii: the2 crystal complex of pii and pipx from synechococcus3 elongatus pcc 7942 66 c3n5bB_ not modelled 7.1 38 PDB header:transcription regulator Chain: B: PDB Molecule:asr0485 protein; PDBTitle: the complex of pii and pipx from anabaena 67 d2vgna3 not modelled 7.1 7 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:ERF1/Dom34 C-terminal domain-like 68 c3cb4D_ not modelled 7.1 31 PDB header:translation Chain: D: PDB Molecule:gtp-binding protein lepa; PDBTitle: the crystal structure of lepa 69 c3kopB_ not modelled 7.0 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein with a cyclophilin-like fold2 (yp_831253.1) from arthrobacter sp. fb24 at 1.90 a resolution 70 c2diuA_ not modelled 6.9 28 PDB header:rna binding protein Chain: A: PDB Molecule:kiaa0430 protein; PDBTitle: solution structure of the rrm domain of kiaa0430 protein 71 c3seeA_ not modelled 6.8 18 PDB header:sugar binding protein Chain: A: PDB Molecule:hypothetical sugar binding protein; PDBTitle: crystal structure of a hypothetical sugar binding protein (bt_4411)2 from bacteroides thetaiotaomicron vpi-5482 at 1.25 a resolution 72 c3ebkA_ not modelled 6.7 50 PDB header:allergen Chain: A: PDB Molecule:allergen bla g 4; PDBTitle: crystal structure of major allergens, bla g 4 from2 cockroaches 73 d1nppa2 not modelled 6.6 43 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 74 c2xexA_ not modelled 6.5 60 PDB header:translation Chain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of staphylococcus aureus elongation factor2 g 75 d1l5oa_ not modelled 6.5 21 Fold:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Superfamily:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Family:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) 76 c3tr5C_ not modelled 6.5 47 PDB header:translation Chain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii 77 c2ywwA_ not modelled 6.5 22 PDB header:metal binding protein Chain: A: PDB Molecule:aspartate carbamoyltransferase regulatory chain; PDBTitle: crystal structure of aspartate carbamoyltransferase2 regulatory chain from methanocaldococcus jannaschii 78 c1ciyA_ not modelled 6.2 32 PDB header:toxin Chain: A: PDB Molecule:cryia(a); PDBTitle: insecticidal toxin: structure and channel formation 79 c1dlcA_ not modelled 5.9 28 PDB header:toxin Chain: A: PDB Molecule:delta-endotoxin cryiiia; PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution 80 d2atcb1 not modelled 5.9 20 Fold:Ferredoxin-like Superfamily:Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Family:Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain 81 c3bb5B_ not modelled 5.8 9 PDB header:unknown function Chain: B: PDB Molecule:stress responsive alpha-beta protein; PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (jann_3925) from jannaschia sp. ccs1 at 2.30 a resolution 82 c2zxeG_ not modelled 5.6 33 PDB header:hydrolase/transport protein Chain: G: PDB Molecule:phospholemman-like protein; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state 83 c1ji6A_ not modelled 5.4 19 PDB header:toxin Chain: A: PDB Molecule:pesticidial crystal protein cry3bb; PDBTitle: crystal structure of the insecticidal bacterial del2 endotoxin cry3bb1 bacillus thuringiensis 84 d1vqot1 not modelled 5.3 35 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal proteins L24p and L21e 85 c1zn0B_ not modelled 5.1 60 PDB header:translation/biosynthetic protein/rna Chain: B: PDB Molecule:elongation factor g; PDBTitle: coordinates of rrf and ef-g fitted into cryo-em map of the2 50s subunit bound with both ef-g (gdpnp) and rrf