Fold library entry viewer: c1ciyA_

Added to library: Tue Mar 16 12:37:34 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	T	P	I	D	I	S	L	S	L	T	Q	F	L	L	S	E	F	V	P	G	A	G	F	V	L	G	L	V	D	I	I	W	G	I	F	G	P	S	Q	W	D	A	F	L	V	Q	I	E	Q	L	I	N	Q	R	I	E	E	F	A	R	N	Q	A	I	S	R	L	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S	S											T	T	S			S																T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	N	L	Y	Q	I	Y	A	E	S	F	R	E	W	E	A	D	P	T	N	P	A	L	R	E	E	M	R	I	Q	F	N	D	M	N	S	A	L	T	T	A	I	P	L	L	A	V	Q	N	Y	Q	V	P	L	L	S	V	Y	V	Q	A	A	N	L	H	L	S	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	T	T																							G	G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	D	V	S	V	F	G	Q	R	W	G	F	D	A	A	T	I	N	S	R	Y	N	D	L	T	R	L	I	G	N	Y	T	D	Y	A	V	R	W	Y	N	T	G	L	E	R	V	W	G	P	D	S	R	D	W	V	R	Y	N	Q	F	R	R	E	L	T	L	T	V	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	G	G	G	T																																						S	S																		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	V	A	L	F	S	N	Y	D	S	R	R	Y	P	I	R	T	V	S	Q	L	T	R	E	I	Y	T	N	P	V	L	E	N	F	D	G	S	F	R	G	M	A	Q	R	I	E	Q	N	I	R	Q	P	H	L	M	D	I	L	N	S	I	T	I	Y	T	D	V	H	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	G	G	G	G		T	T	T			S																		S		S	S			T	T								T	S			S																	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	N	Y	W	S	G	H	Q	I	T	A	S	P	V	G	F	S	G	P	E	F	A	F	P	L	F	G	N	A	G	N	A	A	P	P	V	L	V	S	L	T	G	L	G	I	F	R	T	L	S	S	P	L	Y	R	R	I	I	L	G	S	G	P	N	N	Q	E	L	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														G	G	G		S														S										T	T																S			S	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	D	G	T	E	F	S	F	A	S	L	T	T	N	L	P	S	T	I	Y	R	Q	R	G	T	V	D	S	L	D	V	I	P	P	Q	D	N	S	V	P	P	R	A	G	F	S	H	R	L	S	H	V	T	M	L	S	Q	A	A	G	A	V	Y	T	L	R	A	P	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S								S				S			G	G	G	T	S			S		T	T	S																				T	T		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	W	Q	H	R	S	A	E	F	N	N	I	I	P	S	S	Q	I	T	Q	I	P	L	T	K	S	T	N	L	G	S	G	T	S	V	V	K	G	P	G	F	T	G	G	D	I	L	R	R	T	S	P	G	Q	I	S	T	L	R	V	N	I	T	A	P	L	S	Q	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S		S	S					S	S	S						G	G	G		S				T	T								S	S	S	S	S						S	S	S												S		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	V	R	I	R	Y	A	S	T	T	N	L	Q	F	H	T	S	I	D	G	R	P	I	N	Q	G	N	F	S	A	T	M	S	S	G	S	N	L	Q	S	G	S	F	R	T	V	G	F	T	T	P	F	N	F	S	N	G	S	S	V	F	T	L	S	A	H	V	F	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S									T	T												S		T	T					G	G	G							S	S		B			S	S	S										S	S		T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Sequence	G	N	E	V	Y	I	D	R	I	E	F	V	P	A	E	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													T	T

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PDB structure

FASTA sequence

Hidden Markov model

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