Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP69822
DateThu Jan 5 12:12:07 GMT 2012
Unique Job ID1423f8f72386ca20

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3czcA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:rmpb;
PDBTitle: the crystal structure of a putative pts iib(ptxb) from2 streptococcus mutans
Confidence and coverage
Confidence: 99.9% Coverage: 90%
91 residues ( 90% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHI
Secondary structure 

















SS confidence 



























































Disorder  ???







































???












?
Disorder confidence 



























































 
   .........70.........80.........90.........100.
Sequence  AGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKEHFPQDVK
Secondary structure 










SS confidence 








































Disorder  ????

???




























???
Disorder confidence 








































 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3czc chain A

3D model

Region: 3 - 93
Aligned: 91
Modelled: 91
Confidence: 99.9%
Identity: 38%
PDB header:transferase
Chain: A: PDB Molecule:rmpb;
PDBTitle: the crystal structure of a putative pts iib(ptxb) from2 streptococcus mutans

Phyre2

PDB 1tvm chain A

3D model

Region: 2 - 93
Aligned: 92
Modelled: 92
Confidence: 99.8%
Identity: 14%
PDB header:transferase
Chain: A: PDB Molecule:pts system, galactitol-specific iib component;
PDBTitle: nmr structure of enzyme gatb of the galactitol-specific2 phosphoenolpyruvate-dependent phosphotransferase system

Phyre2

PDB 1vkr chain A

3D model

Region: 4 - 97
Aligned: 91
Modelled: 94
Confidence: 99.7%
Identity: 13%
Fold: Phosphotyrosine protein phosphatases I-like
Superfamily: PTS system IIB component-like
Family: PTS system, Lactose/Cellobiose specific IIB subunit

Phyre2

PDB 1vkr chain A

3D model

Region: 4 - 97
Aligned: 91
Modelled: 94
Confidence: 99.7%
Identity: 13%
PDB header:transferase
Chain: A: PDB Molecule:mannitol-specific pts system enzyme iiabc components;
PDBTitle: structure of iib domain of the mannitol-specific permease enzyme ii

Phyre2

PDB 1iib chain A

3D model

Region: 4 - 95
Aligned: 91
Modelled: 92
Confidence: 99.2%
Identity: 16%
Fold: Phosphotyrosine protein phosphatases I-like
Superfamily: PTS system IIB component-like
Family: PTS system, Lactose/Cellobiose specific IIB subunit

Phyre2

PDB 2l2q chain A

3D model

Region: 2 - 94
Aligned: 92
Modelled: 93
Confidence: 99.2%
Identity: 17%
PDB header:transferase
Chain: A: PDB Molecule:pts system, cellobiose-specific iib component (cela);
PDBTitle: solution structure of cellobiose-specific phosphotransferase iib2 component protein from borrelia burgdorferi

Phyre2

PDB 3sqn chain B

3D model

Region: 2 - 96
Aligned: 86
Modelled: 93
Confidence: 99.1%
Identity: 12%
PDB header:transcription regulator
Chain: B: PDB Molecule:conserved domain protein;
PDBTitle: putative mga family transcriptional regulator from enterococcus2 faecalis

Phyre2

PDB 3nbm chain A

3D model

Region: 2 - 90
Aligned: 88
Modelled: 89
Confidence: 99.1%
Identity: 19%
PDB header:transferase
Chain: A: PDB Molecule:pts system, lactose-specific iibc components;
PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae.

Phyre2

PDB 2kyr chain A

3D model

Region: 1 - 94
Aligned: 94
Modelled: 94
Confidence: 97.9%
Identity: 15%
PDB header:transferase
Chain: A: PDB Molecule:fructose-like phosphotransferase enzyme iib component 1;
PDBTitle: solution structure of enzyme iib subunit of pts system from2 escherichia coli k12. northeast structural genomics consortium target3 er315/ontario center for structural proteomics target ec0544

Phyre2

PDB 2r48 chain A domain 1

3D model

Region: 5 - 97
Aligned: 93
Modelled: 93
Confidence: 97.2%
Identity: 13%
Fold: Phosphotyrosine protein phosphatases I-like
Superfamily: PTS system IIB component-like
Family: PTS system, Fructose specific IIB subunit-like

Phyre2

PDB 2r4q chain A domain 1

3D model

Region: 5 - 97
Aligned: 91
Modelled: 93
Confidence: 95.8%
Identity: 15%
Fold: Phosphotyrosine protein phosphatases I-like
Superfamily: PTS system IIB component-like
Family: PTS system, Fructose specific IIB subunit-like

Phyre2

PDB 1dg9 chain A

3D model

Region: 1 - 40
Aligned: 40
Modelled: 40
Confidence: 94.4%
Identity: 23%
Fold: Phosphotyrosine protein phosphatases I-like
Superfamily: Phosphotyrosine protein phosphatases I
Family: Low-molecular-weight phosphotyrosine protein phosphatases

Phyre2

PDB 1ycg chain A domain 1

3D model

Region: 4 - 60
Aligned: 57
Modelled: 57
Confidence: 94.4%
Identity: 9%
Fold: Flavodoxin-like
Superfamily: Flavoproteins
Family: Flavodoxin-related

Phyre2

PDB 2q5c chain A

3D model

Region: 1 - 95
Aligned: 88
Modelled: 95
Confidence: 93.7%
Identity: 9%
PDB header:transcription
Chain: A: PDB Molecule:ntrc family transcriptional regulator;
PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum

Phyre2

PDB 3jvi chain A

3D model

Region: 2 - 40
Aligned: 39
Modelled: 39
Confidence: 93.5%
Identity: 10%
PDB header:hydrolase
Chain: A: PDB Molecule:protein tyrosine phosphatase;
PDBTitle: product state mimic crystal structure of protein tyrosine phosphatase2 from entamoeba histolytica

Phyre2

PDB 1vme chain A domain 1

3D model

Region: 4 - 60
Aligned: 57
Modelled: 57
Confidence: 93.3%
Identity: 14%
Fold: Flavodoxin-like
Superfamily: Flavoproteins
Family: Flavodoxin-related

Phyre2

PDB 1e5d chain A domain 1

3D model

Region: 4 - 60
Aligned: 57
Modelled: 57
Confidence: 92.9%
Identity: 16%
Fold: Flavodoxin-like
Superfamily: Flavoproteins
Family: Flavodoxin-related

Phyre2

PDB 1zgg chain A

3D model

Region: 3 - 41
Aligned: 39
Modelled: 39
Confidence: 92.8%
Identity: 18%
PDB header:hydrolase
Chain: A: PDB Molecule:putative low molecular weight protein-tyrosine-
PDBTitle: solution structure of a low molecular weight protein2 tyrosine phosphatase from bacillus subtilis

Phyre2

PDB 1ydg chain A

3D model

Region: 3 - 60
Aligned: 58
Modelled: 58
Confidence: 92.4%
Identity: 21%
Fold: Flavodoxin-like
Superfamily: Flavoproteins
Family: WrbA-like

Phyre2

PDB 1f4p chain A

3D model

Region: 4 - 59
Aligned: 56
Modelled: 56
Confidence: 92.2%
Identity: 16%
Fold: Flavodoxin-like
Superfamily: Flavoproteins
Family: Flavodoxin-related

Phyre2
1

c3czcA_
2

c1tvmA_
3

d1vkra_
4

c1vkrA_
5

d1iiba_
6

c2l2qA_
7

c3sqnB_
8

c3nbmA_
9

c2kyrA_
10

d2r48a1
11

d2r4qa1
12

d1dg9a_
13

d1ycga1
14

c2q5cA_
15

c3jviA_
16

d1vmea1
17

d1e5da1
18

c1zggA_
19

d1ydga_
20

d1f4pa_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3czcA_



99.9 38 PDB header:transferase
Chain: A: PDB Molecule:rmpb;
PDBTitle: the crystal structure of a putative pts iib(ptxb) from2 streptococcus mutans
2c1tvmA_



99.8 14 PDB header:transferase
Chain: A: PDB Molecule:pts system, galactitol-specific iib component;
PDBTitle: nmr structure of enzyme gatb of the galactitol-specific2 phosphoenolpyruvate-dependent phosphotransferase system
3d1vkra_



99.7 13 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:PTS system IIB component-like
Family:PTS system, Lactose/Cellobiose specific IIB subunit
4c1vkrA_



99.7 13 PDB header:transferase
Chain: A: PDB Molecule:mannitol-specific pts system enzyme iiabc components;
PDBTitle: structure of iib domain of the mannitol-specific permease enzyme ii
5d1iiba_



99.2 16 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:PTS system IIB component-like
Family:PTS system, Lactose/Cellobiose specific IIB subunit
6c2l2qA_



99.2 17 PDB header:transferase
Chain: A: PDB Molecule:pts system, cellobiose-specific iib component (cela);
PDBTitle: solution structure of cellobiose-specific phosphotransferase iib2 component protein from borrelia burgdorferi
7c3sqnB_



99.1 12 PDB header:transcription regulator
Chain: B: PDB Molecule:conserved domain protein;
PDBTitle: putative mga family transcriptional regulator from enterococcus2 faecalis
8c3nbmA_



99.1 19 PDB header:transferase
Chain: A: PDB Molecule:pts system, lactose-specific iibc components;
PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae.
9c2kyrA_



97.9 15 PDB header:transferase
Chain: A: PDB Molecule:fructose-like phosphotransferase enzyme iib component 1;
PDBTitle: solution structure of enzyme iib subunit of pts system from2 escherichia coli k12. northeast structural genomics consortium target3 er315/ontario center for structural proteomics target ec0544
10d2r48a1



97.2 13 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:PTS system IIB component-like
Family:PTS system, Fructose specific IIB subunit-like
11d2r4qa1



95.8 15 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:PTS system IIB component-like
Family:PTS system, Fructose specific IIB subunit-like
12d1dg9a_



94.4 23 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:Phosphotyrosine protein phosphatases I
Family:Low-molecular-weight phosphotyrosine protein phosphatases
13d1ycga1



94.4 9 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
14c2q5cA_



93.7 9 PDB header:transcription
Chain: A: PDB Molecule:ntrc family transcriptional regulator;
PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum
15c3jviA_



93.5 10 PDB header:hydrolase
Chain: A: PDB Molecule:protein tyrosine phosphatase;
PDBTitle: product state mimic crystal structure of protein tyrosine phosphatase2 from entamoeba histolytica
16d1vmea1



93.3 14 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
17d1e5da1



92.9 16 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
18c1zggA_



92.8 18 PDB header:hydrolase
Chain: A: PDB Molecule:putative low molecular weight protein-tyrosine-
PDBTitle: solution structure of a low molecular weight protein2 tyrosine phosphatase from bacillus subtilis
19d1ydga_



92.4 21 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:WrbA-like
20d1f4pa_



92.2 16 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
21c3f6sI_



not modelled 92.0 16 PDB header:electron transport
Chain: I: PDB Molecule:flavodoxin;
PDBTitle: desulfovibrio desulfuricans (atcc 29577) oxidized flavodoxin2 alternate conformers
22c1u2pA_



not modelled 91.5 16 PDB header:hydrolase
Chain: A: PDB Molecule:low molecular weight protein-tyrosine-
PDBTitle: crystal structure of mycobacterium tuberculosis low2 molecular protein tyrosine phosphatase (mptpa) at 1.9a3 resolution
23c3nhzA_



not modelled 91.2 14 PDB header:dna binding protein
Chain: A: PDB Molecule:two component system transcriptional regulator mtra;
PDBTitle: structure of n-terminal domain of mtra
24c3rofA_



not modelled 91.1 28 PDB header:hydrolase
Chain: A: PDB Molecule:low molecular weight protein-tyrosine-phosphatase ptpa;
PDBTitle: crystal structure of the s. aureus protein tyrosine phosphatase ptpa
25d1tlla2



not modelled 90.7 11 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Cytochrome p450 reductase N-terminal domain-like
26c2cwdA_



not modelled 90.6 18 PDB header:hydrolase
Chain: A: PDB Molecule:low molecular weight phosphotyrosine protein phosphatase;
PDBTitle: crystal structure of tt1001 protein from thermus thermophilus hb8
27d1d1qa_



not modelled 90.2 8 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:Phosphotyrosine protein phosphatases I
Family:Low-molecular-weight phosphotyrosine protein phosphatases
28d2arka1



not modelled 89.8 11 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:WrbA-like
29c1vmeB_



not modelled 89.4 13 PDB header:electron transport
Chain: B: PDB Molecule:flavoprotein;
PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution
30d5pnta_



not modelled 88.8 23 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:Phosphotyrosine protein phosphatases I
Family:Low-molecular-weight phosphotyrosine protein phosphatases
31c3hlyA_



not modelled 88.4 16 PDB header:flavoprotein
Chain: A: PDB Molecule:flavodoxin-like domain;
PDBTitle: crystal structure of the flavodoxin-like domain from2 synechococcus sp q5mzp6_synp6 protein. northeast structural3 genomics consortium target snr135d.
32c2gi4A_



not modelled 88.3 21 PDB header:hydrolase
Chain: A: PDB Molecule:possible phosphotyrosine protein phosphatase;
PDBTitle: solution structure of the low molecular weight protein2 tyrosine phosphatase from campylobacter jejuni.
33c2ohiB_



not modelled 88.1 14 PDB header:oxidoreductase
Chain: B: PDB Molecule:type a flavoprotein fpra;
PDBTitle: crystal structure of coenzyme f420h2 oxidase (fpra), a diiron2 flavoprotein, reduced state
34c1bvyF_



not modelled 86.7 9 PDB header:oxidoreductase
Chain: F: PDB Molecule:protein (cytochrome p450 bm-3);
PDBTitle: complex of the heme and fmn-binding domains of the2 cytochrome p450(bm-3)
35d1bvyf_



not modelled 86.7 9 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
36c2hnbA_



not modelled 86.7 13 PDB header:electron transport
Chain: A: PDB Molecule:protein mioc;
PDBTitle: solution structure of a bacterial holo-flavodoxin
37c3fniA_



not modelled 86.6 11 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative diflavin flavoprotein a 3;
PDBTitle: crystal structure of a diflavin flavoprotein a3 (all3895) from nostoc2 sp., northeast structural genomics consortium target nsr431a
38d2a5la1



not modelled 85.9 14 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:WrbA-like
39c3d7nA_



not modelled 85.2 18 PDB header:electron transport
Chain: A: PDB Molecule:flavodoxin, wrba-like protein;
PDBTitle: the crystal structure of the flavodoxin, wrba-like protein from2 agrobacterium tumefaciens
40d5nula_



not modelled 83.7 20 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
41c3he8A_



not modelled 83.4 45 PDB header:isomerase
Chain: A: PDB Molecule:ribose-5-phosphate isomerase;
PDBTitle: structural study of clostridium thermocellum ribose-5-phosphate2 isomerase b
42d1b1ca_



not modelled 83.3 8 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Cytochrome p450 reductase N-terminal domain-like
43c3m1pA_



not modelled 82.8 35 PDB header:isomerase
Chain: A: PDB Molecule:ribose 5-phosphate isomerase;
PDBTitle: structure of ribose 5-phosphate isomerase type b from trypanosoma2 cruzi, soaked with allose-6-phosphate
44c3k7pA_



not modelled 82.8 35 PDB header:isomerase
Chain: A: PDB Molecule:ribose 5-phosphate isomerase;
PDBTitle: structure of mutant of ribose 5-phosphate isomerase type b from2 trypanosoma cruzi.
45d1ykga1



not modelled 82.8 11 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Cytochrome p450 reductase N-terminal domain-like
46d2vvpa1



not modelled 82.5 30 Fold:Ribose/Galactose isomerase RpiB/AlsB
Superfamily:Ribose/Galactose isomerase RpiB/AlsB
Family:Ribose/Galactose isomerase RpiB/AlsB
47c2wmyH_



not modelled 82.2 24 PDB header:hydrolase
Chain: H: PDB Molecule:putative acid phosphatase wzb;
PDBTitle: crystal structure of the tyrosine phosphatase wzb from2 escherichia coli k30 in complex with sulphate.
48d1ja1a2



not modelled 82.1 7 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Cytochrome p450 reductase N-terminal domain-like
49d1nn4a_



not modelled 81.8 35 Fold:Ribose/Galactose isomerase RpiB/AlsB
Superfamily:Ribose/Galactose isomerase RpiB/AlsB
Family:Ribose/Galactose isomerase RpiB/AlsB
50c3s5pA_



not modelled 81.7 40 PDB header:isomerase
Chain: A: PDB Molecule:ribose 5-phosphate isomerase;
PDBTitle: crystal structure of ribose-5-phosphate isomerase b rpib from giardia2 lamblia
51c3edoA_



not modelled 81.6 12 PDB header:flavoprotein
Chain: A: PDB Molecule:putative trp repressor binding protein;
PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution
52c2fekA_



not modelled 81.3 18 PDB header:hydrolase
Chain: A: PDB Molecule:low molecular weight protein-tyrosine-
PDBTitle: structure of a protein tyrosine phosphatase
53d1iowa1



not modelled 80.7 20 Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
54c3klbA_



not modelled 78.0 15 PDB header:flavoprotein
Chain: A: PDB Molecule:putative flavoprotein;
PDBTitle: crystal structure of putative flavoprotein in complex with fmn2 (yp_213683.1) from bacteroides fragilis nctc 9343 at 1.75 a3 resolution
55c2an1D_



not modelled 77.7 16 PDB header:transferase
Chain: D: PDB Molecule:putative kinase;
PDBTitle: structural genomics, the crystal structure of a putative kinase from2 salmonella typhimurim lt2
56c3hr4C_



not modelled 77.2 9 PDB header:oxidoreductase/metal binding protein
Chain: C: PDB Molecule:nitric oxide synthase, inducible;
PDBTitle: human inos reductase and calmodulin complex
57d1zh2a1



not modelled 77.1 10 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
58c3b6iB_



not modelled 76.2 21 PDB header:flavoprotein
Chain: B: PDB Molecule:flavoprotein wrba;
PDBTitle: wrba from escherichia coli, native structure
59c3orsD_



not modelled 75.8 21 PDB header:isomerase,biosynthetic protein
Chain: D: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase;
PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide mutase2 from staphylococcus aureus
60c2ppwA_



not modelled 75.0 25 PDB header:isomerase
Chain: A: PDB Molecule:conserved domain protein;
PDBTitle: the crystal structure of uncharacterized ribose 5-phosphate isomerase2 rpib from streptococcus pneumoniae
61d1s8na_



not modelled 75.0 15 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
62c3qd5B_



not modelled 74.2 42 PDB header:isomerase
Chain: B: PDB Molecule:putative ribose-5-phosphate isomerase;
PDBTitle: crystal structure of a putative ribose-5-phosphate isomerase from2 coccidioides immitis solved by combined iodide ion sad and mr
63d2fcra_



not modelled 74.0 11 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
64d1czna_



not modelled 73.8 15 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
65c3onoA_



not modelled 73.0 31 PDB header:isomerase
Chain: A: PDB Molecule:ribose/galactose isomerase;
PDBTitle: crystal structure of ribose-5-phosphate isomerase lacab_rpib from2 vibrio parahaemolyticus
66c1e5dA_



not modelled 69.6 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase;
PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas
67c2l18A_



not modelled 69.3 11 PDB header:oxidoreductase
Chain: A: PDB Molecule:arsenate reductase;
PDBTitle: an arsenate reductase in the phosphate binding state
68c2q9uB_



not modelled 69.0 7 PDB header:oxidoreductase
Chain: B: PDB Molecule:a-type flavoprotein;
PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis
69c2jjmH_



not modelled 68.3 18 PDB header:transferase
Chain: H: PDB Molecule:glycosyl transferase, group 1 family protein;
PDBTitle: crystal structure of a family gt4 glycosyltransferase from2 bacillus anthracis orf ba1558.
70c2wc1A_



not modelled 68.1 14 PDB header:electron transport
Chain: A: PDB Molecule:flavodoxin;
PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a
71c1kh2D_



not modelled 67.7 17 PDB header:ligase
Chain: D: PDB Molecule:argininosuccinate synthetase;
PDBTitle: crystal structure of thermus thermophilus hb82 argininosuccinate synthetase in complex with atp
72d2fz5a1



not modelled 67.5 13 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
73d1jf8a_



not modelled 67.2 11 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:Phosphotyrosine protein phosphatases I
Family:Low-molecular-weight phosphotyrosine protein phosphatases
74d1yoba1



not modelled 65.8 13 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
75d1otha2



not modelled 65.3 13 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
76c3c5yD_



not modelled 64.4 29 PDB header:isomerase
Chain: D: PDB Molecule:ribose/galactose isomerase;
PDBTitle: crystal structure of a putative ribose 5-phosphate isomerase2 (saro_3514) from novosphingobium aromaticivorans dsm at 1.81 a3 resolution
77c3tl6B_



not modelled 64.3 11 PDB header:transferase
Chain: B: PDB Molecule:purine nucleoside phosphorylase;
PDBTitle: crystal structure of purine nucleoside phosphorylase from entamoeba2 histolytica
78c1ychD_



not modelled 64.1 9 PDB header:oxidoreductase
Chain: D: PDB Molecule:nitric oxide reductase;
PDBTitle: x-ray crystal structures of moorella thermoacetica fpra.2 novel diiron site structure and mechanistic insights into3 a scavenging nitric oxide reductase
79d1vhwa_



not modelled 63.8 16 Fold:Phosphorylase/hydrolase-like
Superfamily:Purine and uridine phosphorylases
Family:Purine and uridine phosphorylases
80d1y1la_



not modelled 63.8 14 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:Phosphotyrosine protein phosphatases I
Family:Low-molecular-weight phosphotyrosine protein phosphatases
81d1duvg2



not modelled 61.8 15 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
82d1mvoa_



not modelled 61.5 16 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
83d1o4va_



not modelled 59.9 23 Fold:Flavodoxin-like
Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
84d2eyqa5



not modelled 59.6 8 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
85c3lcmB_



not modelled 59.6 20 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159
86d1vlva2



not modelled 58.8 15 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
87d1dxha2



not modelled 58.2 11 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
88c3f6cB_



not modelled 58.2 8 PDB header:dna binding protein
Chain: B: PDB Molecule:positive transcription regulator evga;
PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli
89d1k9sa_



not modelled 57.0 16 Fold:Phosphorylase/hydrolase-like
Superfamily:Purine and uridine phosphorylases
Family:Purine and uridine phosphorylases
90d2ac7a1



not modelled 56.9 12 Fold:Phosphorylase/hydrolase-like
Superfamily:Purine and uridine phosphorylases
Family:Purine and uridine phosphorylases
91c2zkiH_



not modelled 56.6 14 PDB header:transcription
Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding
PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872)
92c3lp6D_



not modelled 56.4 26 PDB header:lyase
Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit;
PDBTitle: crystal structure of rv3275c-e60a from mycobacterium tuberculosis at2 1.7a resolution
93c1k97A_



not modelled 56.3 16 PDB header:ligase
Chain: A: PDB Molecule:argininosuccinate synthase;
PDBTitle: crystal structure of e. coli argininosuccinate synthetase in complex2 with aspartate and citrulline
94d1qcza_



not modelled 55.8 26 Fold:Flavodoxin-like
Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
95d1jl3a_



not modelled 54.9 18 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:Phosphotyrosine protein phosphatases I
Family:Low-molecular-weight phosphotyrosine protein phosphatases
96c3t38B_



not modelled 54.8 18 PDB header:oxidoreductase
Chain: B: PDB Molecule:arsenate reductase;
PDBTitle: corynebacterium glutamicum thioredoxin-dependent arsenate reductase2 cg_arsc1'
97d1rlia_



not modelled 54.6 22 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Hypothetical protein YwqN
98d1xhfa1



not modelled 54.5 13 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
99d1o1xa_



not modelled 54.0 27 Fold:Ribose/Galactose isomerase RpiB/AlsB
Superfamily:Ribose/Galactose isomerase RpiB/AlsB
Family:Ribose/Galactose isomerase RpiB/AlsB
100c2fw9A_



not modelled 52.2 28 PDB header:lyase
Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase;
PDBTitle: structure of pure (n5-carboxyaminoimidazole ribonucleotide mutase)2 h59f from the acidophilic bacterium acetobacter aceti, at ph 8
101d1u11a_



not modelled 52.1 28 Fold:Flavodoxin-like
Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
102c1nvtA_



not modelled 51.3 20 PDB header:oxidoreductase
Chain: A: PDB Molecule:shikimate 5'-dehydrogenase;
PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+
103d1odka_



not modelled 51.2 16 Fold:Phosphorylase/hydrolase-like
Superfamily:Purine and uridine phosphorylases
Family:Purine and uridine phosphorylases
104c1wv9B_



not modelled 50.6 24 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:rhodanese homolog tt1651;
PDBTitle: crystal structure of rhodanese homolog tt1651 from an2 extremely thermophilic bacterium thermus thermophilus hb8
105c3cfyA_



not modelled 50.5 14 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative luxo repressor protein;
PDBTitle: crystal structure of signal receiver domain of putative luxo2 repressor protein from vibrio parahaemolyticus
106c3eywA_



not modelled 47.4 18 PDB header:transport protein
Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux
PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff
107c2w37A_



not modelled 47.3 15 PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase, catabolic;
PDBTitle: crystal structure of the hexameric catabolic ornithine2 transcarbamylase from lactobacillus hilgardii
108c1z34A_



not modelled 46.9 16 PDB header:transferase
Chain: A: PDB Molecule:purine nucleoside phosphorylase;
PDBTitle: crystal structure of trichomonas vaginalis purine nucleoside2 phosphorylase complexed with 2-fluoro-2'-deoxyadenosine
109d1a4ia1



not modelled 45.1 19 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
110d1nksa_



not modelled 43.8 29 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
111c1kgsA_



not modelled 43.6 14 PDB header:dna binding protein
Chain: A: PDB Molecule:dna binding response regulator d;
PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima
112c3qpbB_



not modelled 42.8 18 PDB header:transferase
Chain: B: PDB Molecule:uridine phosphorylase;
PDBTitle: crystal structure of streptococcus pyogenes uridine phosphorylase2 reveals a subclass of the np-i superfamily
113c3updA_



not modelled 42.6 17 PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: 2.9 angstrom crystal structure of ornithine carbamoyltransferase2 (argf) from vibrio vulnificus
114d1oboa_



not modelled 42.5 11 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
115c3rggD_



not modelled 42.4 13 PDB header:lyase
Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein;
PDBTitle: crystal structure of treponema denticola pure bound to air
116d1p8aa_



not modelled 42.3 14 Fold:Phosphotyrosine protein phosphatases I-like
Superfamily:Phosphotyrosine protein phosphatases I
Family:Low-molecular-weight phosphotyrosine protein phosphatases
117d1dl5a1



not modelled 42.1 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Protein-L-isoaspartyl O-methyltransferase
118d1kgsa2



not modelled 42.1 14 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
119d1rtta_



not modelled 42.0 14 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:NADPH-dependent FMN reductase
120c2otcA_



not modelled 41.0 15 PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: ornithine transcarbamoylase complexed with n-2 (phosphonacetyl)-l-ornithine

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0