PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3qpbB_

Fold library id	PDB Header	Molecule	Title
c3qpbB_	PDB header: transferase	Chain: B: PDB Molecule: uridine phosphorylase;	PDBTitle: crystal structure of streptococcus pyogenes uridine phosphorylase2 reveals a subclass of the np-i superfamily

Links to external resources
Added to library: Sat Aug 27 09:55:19 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V G L Q Y H L Q I R P G D V G R Y V I M P G D P K R C A K I A E H F D N A V L V A D S R E Y V T Y T G T L N G E K V S V T S T G I G G P S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S S
S S
T T T T S T T T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S I A M E E L K L C G A D T F I R V G T C G G I E L D V K G G D I V I A T G A I R M E G T S K E Y A P I E F P A V A D L E V T N A L V N A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T
T T
S S S G G G T S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K K L G Y T S H A G V V Q C K D A F Y G Q H E P E R M P V S Y E L L N K W E A W K R L G T K A S E M E S A A L F V A A S H L G V R C G S D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
G G G S T T T T T
S S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250

Sequence L V V G N Q E R N A L G M D N P M A H D T E A A I Q V A V E A L R T L I E N D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	G	L	Q	Y	H	L	Q	I	R	P	G	D	V	G	R	Y	V	I	M	P	G	D	P	K	R	C	A	K	I	A	E	H	F	D	N	A	V	L	V	A	D	S	R	E	Y	V	T	Y	T	G	T	L	N	G	E	K	V	S	V	T	S	T	G	I	G	G	P	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T				T	T	S	S		S						S		T	T							T	T	S										T	T									T	T										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	I	A	M	E	E	L	K	L	C	G	A	D	T	F	I	R	V	G	T	C	G	G	I	E	L	D	V	K	G	G	D	I	V	I	A	T	G	A	I	R	M	E	G	T	S	K	E	Y	A	P	I	E	F	P	A	V	A	D	L	E	V	T	N	A	L	V	N	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T														S	T	T			T	T												S	S	S	G	G	G	T	S		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	K	L	G	Y	T	S	H	A	G	V	V	Q	C	K	D	A	F	Y	G	Q	H	E	P	E	R	M	P	V	S	Y	E	L	L	N	K	W	E	A	W	K	R	L	G	T	K	A	S	E	M	E	S	A	A	L	F	V	A	A	S	H	L	G	V	R	C	G	S	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T												S								G	G	G	S	T	T													T	T	T						S	S												T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Sequence	L	V	V	G	N	Q	E	R	N	A	L	G	M	D	N	P	M	A	H	D	T	E	A	A	I	Q	V	A	V	E	A	L	R	T	L	I	E	N	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T									T