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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2020 Jan 18

Fold library idPDB HeaderMoleculeTitle
c6j3iA_ 2.50 transferase Chain: A: gamma-glutamyltranspeptidase;
c6sj0B_ 1.75 hydrolase Chain: B: amidohydrolase;
c6j2vB_ 1.90 transferase Chain: B: plp-dependent aminotransferases;
c6r2hB_ 2.46 metal binding protein Chain: B: hmuy protein;
c6r4eB_ 2.35 transferase Chain: B: glutamine--fructose-6-phosphate aminotransferase
c6siwB_ 1.96 ligase Chain: B: paak-like ligase (amp-dependent synthetase and ligase);
c6nv1E_ 2.50 membrane protein Chain: E: matrix protein 2;
c6juyA_ 2.97 hydrolase Chain: A: sll1336 protein;
c6uziA_ 2.80 oxidoreductase Chain: A: dihydrolipoyl dehydrogenase;
c6kobA_ 3.60 oxidoreductase Chain: A: aa3-600 quinol oxidase subunit i;
c6kobB_ 3.60 oxidoreductase Chain: B: quinol oxidase subunit 2;
c6kobH_ 3.60 oxidoreductase Chain: H: aa3-600 quinol oxidase subunit iv,quinol oxidase subunit 4;
c6nlqA_ 1.15 ligase Chain: A: alanine--trna ligase, mitochondrial;
c6kocC_ 3.80 oxidoreductase Chain: C: aa3-600 quinol oxidase subunit iiii;
c6ks5B_ 2.80 hydrolase Chain: B: type iv secretion protein dot;
c6kanD_ 2.25 transferase Chain: D: fukutin-related protein;
c6s9jG_ 2.70 viral protein Chain: G: transferrin receptor 1,transferrin receptor 1;
c6kz4E_ 3.00 lipid transport Chain: E: intermembrane transport protein yebt;
c6v3qB_ 2.40 hydrolase Chain: B: metallo-beta-lactamase fim-1;
c6qa0A_ 1.71 oxidoreductase Chain: A: methionine-r-sulfoxide reductase b3;
c6sdwA_ UNK rna binding protein Chain: A: double-stranded rna-binding protein staufen homolog 1;
c6uqkB_ 3.77 transport protein Chain: B: inositol 1,4,5-triphosphate receptor, type 3;
c6v55A_ 2.38 cell adhesion Chain: A: adhesion g-protein coupled receptor g6;
c6iomB_ 2.59 cell adhesion Chain: B: ly6/plaur domain-containing protein 3;
c6kz3B_ 3.10 lipid transport Chain: B: intermembrane transport protein yebt;
c6kobD_ 3.60 oxidoreductase Chain: D: aa3-600 quinol oxidase subunit iv,quinol oxidase subunit 4;
c6kspC_ 8.10 membrane protein Chain: C: glutamate receptor ionotropic, delta-1;
c6hasB_ 1.38 chaperone Chain: B: ribulose bisphosphate carboxylase/oxygenase activase;
c6v98A_ 1.80 hydrolase Chain: A: cysteine hydrolase;
c6izgA_ UNK endocytosis Chain: A: ubiquitin-fold modifier 1;
c6kn8Z_ 4.80 contractile protein/actin binding protei Chain: Z: tropomyosin alpha-1 chain;
c6venO_ 3.37 transferase/structural protein/dna Chain: O: compass component bre2;
c6q78B_ 1.50 hydrolase Chain: B: gh26c;
c6uekB_ 2.16 lyase Chain: B: urocanate hydratase;
c6q6pB_ 3.00 oxygen binding Chain: B: cytoglobin;
c6kn8S_ 4.80 contractile protein/actin binding protei Chain: S: tropomyosin alpha-1 chain;
c6o14A_ 2.65 membrane protein Chain: A: abc transporter;
c6j6aB_ 2.35 metal binding protein Chain: B: zinc-dependent protease, tldd/pmba family;
c6jn8A_ 2.11 hydrolase Chain: A: peptidase m23;
c6kn7Z_ 6.60 contractile protein/actin binding protei Chain: Z: tropomyosin alpha-1 chain;
c6t5zA_ 1.60 oxidoreductase Chain: A: chitin-binding type-4 domain-containing protein;
c6j31D_ 2.24 biosynthetic protein Chain: D: kcn28;
c6tuaA_ 2.38 signaling protein Chain: A: tyrosine-protein kinase ryk;
c6nlyB_ 2.31 ligase Chain: B: alanine--trna ligase, mitochondrial;
c6kn7a_ 6.60 contractile protein/actin binding protei Chain: A: actin, alpha skeletal muscle;
c6sd0D_ 3.70 hydrolase Chain: D: beta-galactosidase;
c6kocH_ 3.80 oxidoreductase Chain: H: quinol oxidase subunit 4,quinol oxidase subunit 4;
c6j4cA_ 1.58 isomerase Chain: A: cupin superfamily protein;
c6v92D_ 20.00 gene regulation/dna Chain: D: chromatin structure-remodeling complex protein rsc14;
c6j4fB_ 2.40 dna binding protein/dna Chain: B: probable wrky transcription factor 2;
c6nv1C_ 2.50 membrane protein Chain: C: matrix protein 2;
c6nl2A_ 1.92 biosynthetic protein Chain: A: desferrioxamine e biosynthesis protein desd;
c6jx7B_ 3.31 viral protein Chain: B: feline infectious peritonitis virus spike protein;
c6qamA_ UNK membrane protein Chain: A: outer membrane protein alkl;
c6v77B_ 1.75 unknown function Chain: B: putative hpce protein;
c6nk9A_ UNK toxin Chain: A: aca toxin 1;
c6qj6E_ 1.74 hydrolase Chain: E: trehalose 6-phosphate phosphatase;
c6nv1A_ 2.50 membrane protein Chain: A: matrix protein 2;
c6sseA_ 1.56 transferase Chain: A: fori-pmp;
c6v92R_ 20.00 gene regulation/dna Chain: R: nuclear protein sth1/nps1;
c6lekA_ UNK structural protein Chain: A: cement protein-20k;
c6q75B_ 1.75 hydrolase Chain: B: gh26a;
c6l8dA_ 2.91 hydrolase Chain: A: magnesium-chelatase subunit chli;
c6ryoA_ 1.92 hydrolase Chain: A: lipoprotein signal peptidase;
c6v92G_ 20.00 gene regulation/dna Chain: G: chromatin structure-remodeling complex protein rsc3;
c6kocD_ 3.80 oxidoreductase Chain: D: quinol oxidase subunit 4,quinol oxidase subunit 4;
c6qdwz_ 2.83 ribosome Chain: Z:
c6kilA_ 1.60 oxidoreductase Chain: A: thioredoxin;
c6kn7R_ 6.60 contractile protein/actin binding protei Chain: R: tropomyosin alpha-1 chain;
c6nv1H_ 2.50 membrane protein Chain: H: matrix protein 2;
c6koeD_ 3.75 oxidoreductase Chain: D: aa3-600 quinol oxidase subunit iv;
c6nv1F_ 2.50 membrane protein Chain: F: matrix protein 2;
c6nv1D_ 2.50 membrane protein Chain: D: matrix protein 2;
c6q9mB_ 2.45 exocytosis Chain: B: rim-binding protein, isoform f;
c6kn8Y_ 4.80 contractile protein/actin binding protei Chain: Y: tropomyosin alpha-1 chain;
c6kn8R_ 4.80 contractile protein/actin binding protei Chain: R: tropomyosin alpha-1 chain;
c6kzjA_ 1.50 protein binding Chain: A: ankyrin-2;
c6kr4H_ 2.85 transferase/protein binding Chain: H: liprin-alpha-3;
c6q8qA_ 2.00 hormone Chain: A: insulin;
c6j4eB_ 3.13 dna binding protein/dna Chain: B: wrky transcription factor 1;
c6ir4A_ 2.00 oxidoreductase Chain: A: slr0355 protein;
c6nv1B_ 2.50 membrane protein Chain: B: matrix protein 2;
c6t72A_ 3.70 structural protein Chain: A: s-layer protein;
c6kn7Y_ 6.60 contractile protein/actin binding protei Chain: Y: tropomyosin alpha-1 chain;
c6koeH_ 3.75 oxidoreductase Chain: H: aa3-600 quinol oxidase subunit iv;
c6j5eH_ 2.33 viral protein/inhibitor Chain: H: sc29ek;
c6nv1G_ 2.50 membrane protein Chain: G: matrix protein 2;
c6kn7S_ 6.60 contractile protein/actin binding protei Chain: S: tropomyosin alpha-1 chain;
c6j5eJ_ 2.33 viral protein/inhibitor Chain: J: sc29ek;
c6j5eL_ 2.33 viral protein/inhibitor Chain: L: sc29ek;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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