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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ks5B_

Fold library idPDB HeaderMoleculeTitle
c6ks5B_2.80PDB header: hydrolaseChain: B: PDB Molecule: type iv secretion protein dot;


Added to library: Sat Jan 18 08:29:01 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLQERVENAVDVSGAFDNCFFHNFALYLLTNNLPLPDDLFHFKSIINRSKAEQLFEFFHNPESLNLFSIG
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Known secondary structure (DSSP)

SSTTTT



GGG
TTT



TTTTT


SS



STTGGGT
SSGGG






 .........80.........90.........100.........110.........120.........130.........140
Sequence YLFEKSLILGFLLREWFPTQLVNNSAVKAEMLEGEKGVFSAFKNYKEYRSFMSKEELKSTEFGALYEANE
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Known secondary structure (DSSP)
TTTT
TTSSTTSTTTS
SSSSTTSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AFLEYFYNRSESTLINKDSPFEKYFVGSSSDEEAIKNYWDAEGYTLYCQHLAKPQVKLSYIEIMTMMKVI
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Known secondary structure (DSSP)
S


TT
TTGGGTSSTT
TTTTSTT



T
 .........220.........230.........240.........250.........260.........270.........280
Sequence NQPLTIYDRSTSSIVAEYVNPKVNLPDFEVAIDALQGHYFLLKTEETEKELEEYERSYAQYKRDRSEILA
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Known secondary structure (DSSP) T

TTT



TT

S


SSSSS



SS
 .........290.........300.........310...
Sequence HSDKPVSSLLVRATCPKGHLDEDPFIALIESLS
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Known secondary structure (DSSP) S

S



TTS
TTTS
SSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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