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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6kz3B_

Fold library idPDB HeaderMoleculeTitle
c6kz3B_3.10PDB header: lipid transportChain: B: PDB Molecule: intermembrane transport protein yebt;


Added to library: Sat Jan 18 08:45:38 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKA
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Known secondary structure (DSSP)


S

SS

TTT
TT
TTSSS


SS
TTSSSSS





 .........80.........90.........100.........110.........120.........130.........140
Sequence SLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLNSGSLVYFRKIP
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Known secondary structure (DSSP)
SSSSSS
GGGS





SS




BSS






SS
SS

S

TT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDS
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Known secondary structure (DSSP)
TTSS

GGGTTS
BTT


S





SS







S


 .........220.........230.........240.........250.........260.........270.........280
Sequence PEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEM
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Known secondary structure (DSSP)
SSS
B

TT
SSTTTT


S

SS

SSS
TT


TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTL
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Known secondary structure (DSSP)
TTSGGG
BTT





TTT

TT




SSB
S

B
SSSTTSSSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TLTAPESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSGGIRILPGDK
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Known secondary structure (DSSP) SS
TT

TT
TT

TT

STTTTT

SS






SS
 .........430.........440.
Sequence GEMKASYPLYANLEKALENSL
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Known secondary structure (DSSP)



SSSGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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