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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2019 Jan 26

Fold library idPDB HeaderMoleculeTitle
c6ncvE_ 3.70 signaling protein, protein fibril Chain: E: nacht, lrr and pyd domains-containing protein 6;
c6mgkB_ 2.10 hydrolase Chain: B: xyloglucanase;
c5ouwA_ 2.05 metal binding protein Chain: A: ferritin;
c6hrdD_ 2.11 oxidoreductase Chain: D: 3-hydroxybutyryl-coa dehydrogenase;
c6focD_ 4.00 hydrolase Chain: D: atp synthase subunit beta;
c6htnE_ 1.55 sugar binding protein Chain: E: fucose-binding lectin;
c6gqaD_ 1.90 cell cycle Chain: D: cell cycle protein gpsb;
c6c72C_ 2.40 hydrolase Chain: C: particle-associated glycoside hydrolase;
c5z4yB_ 2.40 dna binding protein Chain: B: cys regulon transcriptional activator;
c6ic4C_ 8.70 protein transport Chain: C: toluene tolerance efflux transporter (abc superfamily,
c6ixhQ_ 4.00 membrane protein Chain: Q: type vi secretion system tssm;
c5zf1A_ 1.75 oxidoreductase Chain: A: 5,10-methylenetetrahydrofolate dehydrogenase;
c5xknE_ 3.65 transferase/signaling protein Chain: E: epidermal patterning factor-like protein 4;
c6idxC_ 1.70 cell adhesion Chain: C: adhesion g protein-coupled receptor b1;
c5zr4B_ 3.10 transcription Chain: B: metal-dependent transcriptional regulator;
c6fcoB_ 2.03 transport protein Chain: B: mitochondrial frataxin-like protein;
c6crdG_ 2.57 viral protein/hydrolase Chain: G: tetrabrachion,neuraminidase;
c6e7oB_ 3.00 lipid binding protein Chain: B: mammalian ependymin-related protein 1;
c6a2rD_ 2.25 hydrolase Chain: D: lexa repressor;
c5xzsA_ 9.80 transcription Chain: A: histone acetyltransferase p300;
c6ic4K_ 8.70 protein transport Chain: K: ttg2e;
c5xjxB_ 3.06 transferase/membrane protein Chain: B: lrr receptor-like serine/threonine-protein kinase erl1;
c6dnmA_ 1.40 chaperone Chain: A: export chaperone sats;
c6n29A_ 2.50 blood clotting Chain: A: von willebrand factor;
c6focB_ 4.00 hydrolase Chain: B: atp synthase subunit alpha,atp synthase subunit alpha,atp
c5z3kB_ 1.80 hydrolase Chain: B: glucosidase;
c6czoD_ 2.95 hydrolase Chain: D: casc5 protein;
c6czoB_ 2.95 hydrolase Chain: B: casc5 protein;
c6qekB_ 1.95 transport protein Chain: B: magnetosome protein;
c6gyyB_ 2.77 transferase Chain: B: diadenylate cyclase;
c6n4xB_ 4.00 membrane protein Chain: B: metabotropic glutamate receptor 5;
c6c6mA_ 2.50 cell adhesion Chain: A: myosin light chain kinase, smooth muscle;
c5xkjF_ 3.48 transferase/membrane protein/hormone Chain: F: protein epidermal patterning factor 2;
c6efrA_ 2.40 choline-binding protein Chain: A: inicsnfr 1.0, a genetically encoded nicotine biosensor,
c5xjxC_ 3.06 transferase/membrane protein Chain: C: protein too many mouths;
c5z50A_ 2.21 dna binding protein Chain: A: cys regulon transcriptional activator;
c6c4sB_ 1.50 transferase, peptide binding protein Chain: B: proto-oncogene tyrosine-protein kinase src,csrc sh3 domain;
c5xknF_ 3.65 transferase/signaling protein Chain: F: epidermal patterning factor-like protein 4;
c6ic4I_ 8.70 protein transport Chain: I: abc transporter atp-binding protein;
c6iycE_ 2.60 membrane protein Chain: E: amyloid-beta a4 protein;
c6g2gA_ 2.57 cytosolic protein Chain: A: cytosolic fe-s cluster assembly factor cfd1;
c6n50A_ 3.75 signaling protein Chain: A: metabotropic glutamate receptor 5;
c6nlpA_ 1.90 transport protein Chain: A: bacterial extracellular solute-binding family protein;
c6hhkB_ 2.38 viral protein Chain: B: gp105;
c6n52B_ 4.00 membrane protein Chain: B: metabotropic glutamate receptor 5;
c5xjoF_ 2.63 transferase/membrane protein Chain: F: protein epidermal patterning factor 1;
c6focG_ 4.00 hydrolase Chain: G: atp synthase gamma chain;
c6gyaA_ 2.95 hydrolase Chain: A: amylase;
c5z6dB_ 1.60 metal binding protein Chain: B: duf1881 domain-containing protein;
c6aghA_ 2.74 metal binding protein Chain: A: calcium uptake protein 2, mitochondrial;
c6ae1B_ 2.41 rna binding protein Chain: B: crispr-associated protein, tm1810 family;
c6dnoB_ 1.45 signaling protein Chain: B: protein phosphatase 1 regulatory subunit 3a;
c6c76A_ 2.10 oxidoreductase Chain: A: alcohol dehydrogenase;
c6niyA_ 3.34 membrane protein Chain: A: guanine nucleotide-binding protein g(s) subunit alpha
c6agjB_ 3.00 metal binding protein Chain: B: calcium uptake protein 3, mitochondrial;
c6i2mA_ 2.30 viral protein Chain: A: kelch repeat and btb domain-containing protein a55;
c6bzrA_ 2.80 transport protein Chain: A: multidrug resistance-associated protein 6;
c6hbeA_ 1.63 oxidoreductase Chain: A: copper-containing nitrite reductase;
c6nkeA_ 1.72 transferase Chain: A: geranylgeranylglyceryl phosphate synthase;
c6hkcA_ UNK membrane protein Chain: A: gamma-aminobutyric acid type b receptor subunit 1;
c6gyzB_ 3.00 isomerase Chain: B: phosphoglucosamine mutase;
c6c4sA_ 1.50 transferase, peptide binding protein Chain: A: proto-oncogene tyrosine-protein kinase src,csrc sh3 domain;
c6ae2B_ 2.70 rna binding protein Chain: B: csm3;
c6cokA_ 1.89 protein binding Chain: A: protein stu1;
c6irdB_ 2.81 hydrolase/protein binding Chain: B: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase;
c6idxA_ 1.70 cell adhesion Chain: A: engulfment and cell motility protein 2;
c6ic4H_ 8.70 protein transport Chain: H: abc transporter permease;
c6ahwB_ 1.56 transferase Chain: B: circular-permutated trna (cytidine(34)-2'-o)-
c6irdC_ 2.81 hydrolase/protein binding Chain: C: inad-like protein;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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