Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ixhQ_

Fold library idPDB HeaderMoleculeTitle
c6ixhQ_4.00PDB header: membrane proteinChain: Q: PDB Molecule: type vi secretion system tssm;


Added to library: Sat Jan 26 08:21:22 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TQNSDAMLYQKMLARVAHQFADMRLTDMTGDTDVSRLFFTDEVVPGMFTRQAWEEAVLPSIDTVINEVSP
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)


SSSTTT


B
STTSSTTS

TTT



S
B
SS
STTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence EALRQRLTTRYFADFGNAWLNFLNSLHLRKAQTLSDVTEQLTLMADVRQSPLVALMNTLAVQGCTGQHGP
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TT






TTS
TTS
TTTSTSS




T
 .........150.........160.........170.........180.........190.........200.........210
Sequence LATTFGPVLALMDNQNNSADMLNLQTYLTRVTQVRLRLQQIAGSSDPQAMMQLLAQTVLQGKSVDLTDTR
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTTTSTT


TTS



STTTTTTSTSSS
S


SSSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DYGSLTAAGLGQEWYGFGQTVFVRPMEQAWQQVLTPAAESLNARWRTAVVDGWNNAFSGRYPFKNVSSDA
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) S
SSSTTTTTTTTTTTTTTTTTTSSS
BTTSSSSSB
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLPLLAKYLNTDTGRIARFLQNNLSGVLHREGSRWVPDTINTRGLTFNPAFLKAINTLSEIADVAFTTGN
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
TTTS
SSS
TT
TTTTT
STT
SS

B
TTTTTTTTGGGTTSTTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AGLHFELRPGTAAGVMQTTLITDNQKLIYVNQMPVWKRFTWPADTEAPGASLSWVSTQAGTRQYADLPGS
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) S
B




TTSS


SSSS




BT


SS
SSS
ST
 .........430.........440.........450.........460.........470.........480.....
Sequence WGLIRLLEMARRKAAPGVASGWSLSWQAQDGRMLNYTLRTEAGEGPLVLLKLRNFVLPETVFELS
Predicted secondary structure






























SS confidence
































































Known secondary structure (DSSP) TTS

SSSTT

STT

SSTTGGGGGGGSTT



S
SB



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D