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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6efrA_

Fold library idPDB HeaderMoleculeTitle
c6efrA_2.40PDB header: choline-binding proteinChain: A: PDB Molecule: inicsnfr 1.0, a genetically encoded nicotine biosensor,


Added to library: Sat Jan 26 08:25:50 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NDTVVVGSINFTEQIIVANMVAEMIEAHTDLKVVRKLNLGGTNVNFEAIKRGGANNGIDIYVEYTGTGLV
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Known secondary structure (DSSP)

SSSS

SS
GGGTS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DILGFPEPNVYITADKQKNGIKANFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKD
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Known secondary structure (DSSP) TTTT
SS

GGGTBTTS
SSSS





S

 .........150.........160.........170.........180.........190.........200.........210
Sequence PNEKRDHMVLLEFVTAAGISMSKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKFICTT
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Known secondary structure (DSSP) TT

SS




TGGGGGSSTTGGGTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GKLPVPWPTLVTTLVQCFSRYPDHMKQHDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRI
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Known secondary structure (DSSP) SS
SS
GGGGTTT

GGGSB

GGGGGG
TTTT
TTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ELKGIDFKEDGNILGHKLEYNFPPPSTDPEGAYETVKKEYKRKWNIVWLKPLGFNNTYTLAVKDELAKQY
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Known secondary structure (DSSP) S

TTSTTTTT
B
SS





STT




S
B

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence NLKTFSDLAKISDKLILGATMFFLEKPDGYPGLQKLYNFKFKHTKSMDMGIRYTAIDNNEVQVIDAFATD
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Known secondary structure (DSSP) T

B

S


TTS
STTTT


S





TTTS
STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence GLLVSHKLKILEDDKHFFPPYYAAPIIRQDVLDKHPELKDVLNKLANQISDEEMQKLNYKVDGEGQDPAK
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Known secondary structure (DSSP) TTT
B
TT

S


B
TTTTT


TT


 .........500...
Sequence VAKEFLKEKGLIL
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Known secondary structure (DSSP) TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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