1 c2xr1B_
43.6
25
PDB header: hydrolaseChain: B: PDB Molecule: cleavage and polyadenylation specificity factor 100 kdPDBTitle: dimeric archaeal cleavage and polyadenylation specificity2 factor with n-terminal kh domains (kh-cpsf) from methanosarcina3 mazei
2 c3af5A_
41.0
30
PDB header: hydrolaseChain: A: PDB Molecule: putative uncharacterized protein ph1404;PDBTitle: the crystal structure of an archaeal cpsf subunit, ph1404 from2 pyrococcus horikoshii
3 d1ynha1
40.0
100
Fold: Pentein, beta/alpha-propellerSuperfamily: PenteinFamily: Succinylarginine dihydrolase-like4 d1v5ka_
37.4
33
Fold: CH domain-likeSuperfamily: Calponin-homology domain, CH-domainFamily: Calponin-homology domain, CH-domain5 c2az4A_
33.2
10
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein ef2904;PDBTitle: crystal structure of a protein of unknown function from enterococcus2 faecalis v583
6 d1ej2a_
32.3
13
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Nucleotidylyl transferaseFamily: Adenylyltransferase7 c2xr1A_
30.9
25
PDB header: hydrolaseChain: A: PDB Molecule: cleavage and polyadenylation specificity factor 100 kdPDBTitle: dimeric archaeal cleavage and polyadenylation specificity2 factor with n-terminal kh domains (kh-cpsf) from methanosarcina3 mazei
8 c1w0pA_
29.2
75
PDB header: hydrolaseChain: A: PDB Molecule: sialidase;PDBTitle: vibrio cholerae sialidase with alpha-2,6-sialyllactose
9 c1wyoA_
22.9
28
PDB header: structural proteinChain: A: PDB Molecule: microtubule-associated protein rp/eb familyPDBTitle: solution structure of the ch domain of human microtubule-2 associated protein rp/eb family member 3
10 d2qjza1
21.7
32
Fold: CH domain-likeSuperfamily: Calponin-homology domain, CH-domainFamily: Calponin-homology domain, CH-domain11 c3elkA_
21.5
23
PDB header: transcription regulatorChain: A: PDB Molecule: putative transcriptional regulator ta0346;PDBTitle: crystal structure of putative transcriptional regulator ta0346 from2 thermoplasma acidophilum
12 c2bibA_
20.4
53
PDB header: hydrolaseChain: A: PDB Molecule: teichoic acid phosphorylcholine esterase/ choline bindingPDBTitle: crystal structure of the complete modular teichioic acid2 phosphorylcholine esterase pce (cbpe) from streptococcus3 pneumoniae
13 c2ycbA_
20.0
30
PDB header: hydrolaseChain: A: PDB Molecule: cleavage and polyadenylation specificity factor;PDBTitle: structure of the archaeal beta-casp protein with n-terminal2 kh domains from methanothermobacter thermautotrophicus
14 c2e1nA_
18.5
19
PDB header: circadian clock proteinChain: A: PDB Molecule: pex;PDBTitle: crystal structure of the cyanobacterium circadian clock modifier pex
15 c2dqlA_
17.8
15
PDB header: circadian clock proteinChain: A: PDB Molecule: pex protein;PDBTitle: crytal structure of the circadian clock associated protein2 pex from anabaena
16 d1jjcb3
16.8
35
Fold: OB-foldSuperfamily: Nucleic acid-binding proteinsFamily: Myf domain17 c3l7wA_
15.4
29
PDB header: transcriptionChain: A: PDB Molecule: putative uncharacterized protein smu.1704;PDBTitle: the crystal structure of smu.1704 from streptococcus mutans ua159
18 d1ewsa_
14.9
35
Fold: Defensin-likeSuperfamily: Defensin-likeFamily: Defensin19 c1ewsA_
14.9
35
PDB header: antimicrobial proteinChain: A: PDB Molecule: rk-1 defensin;PDBTitle: the three-dimensional solution structure of the rabbit2 kidney defensin, rk-1
20 c1tnuL_
14.6
12
PDB header: transferaseChain: L: PDB Molecule: geranylgeranyl transferase type i beta subunit;PDBTitle: rat protein geranylgeranyltransferase type-i complexed with2 a ggpp analog and a gcincckvl peptide derived from rhob
21 d1n4qb_
not modelled
14.6
12
Fold: alpha/alpha toroidSuperfamily: Terpenoid cyclases/Protein prenyltransferasesFamily: Protein prenyltransferases22 d2h6fb1
not modelled
14.5
18
Fold: alpha/alpha toroidSuperfamily: Terpenoid cyclases/Protein prenyltransferasesFamily: Protein prenyltransferases23 d2i7xa1
not modelled
14.3
24
Fold: Metallo-hydrolase/oxidoreductaseSuperfamily: Metallo-hydrolase/oxidoreductaseFamily: beta-CASP RNA-metabolising hydrolases24 c2i7xA_
not modelled
14.3
24
PDB header: rna binding protein, protein bindingChain: A: PDB Molecule: protein cft2;PDBTitle: structure of yeast cpsf-100 (ydh1p)
25 c1ztmC_
not modelled
14.1
29
PDB header: viral proteinChain: C: PDB Molecule: fusion glycoprotein;PDBTitle: structure of the uncleaved paramyxovirus (hpiv3) fusion protein
26 d1u7na_
not modelled
14.1
39
Fold: Isocitrate/Isopropylmalate dehydrogenase-likeSuperfamily: Isocitrate/Isopropylmalate dehydrogenase-likeFamily: PlsX-like27 c3aygA_
not modelled
13.8
31
PDB header: oxidoreductaseChain: A: PDB Molecule: nitric oxide reductase;PDBTitle: crystal structure of nitric oxide reductase complex with hqno
28 d2esha1
not modelled
13.4
21
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: PadR-like29 c2dkxA_
not modelled
13.2
13
PDB header: signaling proteinChain: A: PDB Molecule: sam pointed domain-containing ets transcriptionPDBTitle: solution structure of the sam_pnt-domain of ets2 transcription factor pdef (prostate ets)
30 d1wraa1
not modelled
12.3
53
Fold: Metallo-hydrolase/oxidoreductaseSuperfamily: Metallo-hydrolase/oxidoreductaseFamily: Pce catalytic domain-like31 c3lq6A_
not modelled
11.8
30
PDB header: viral proteinChain: A: PDB Molecule: capsid protein;PDBTitle: crystal structure of murine norovirus protruding (p) domain
32 d1f9aa_
not modelled
11.6
21
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Nucleotidylyl transferaseFamily: Adenylyltransferase33 d2aq0a1
not modelled
10.9
14
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: Hef domain-like34 c3oirA_
not modelled
10.9
14
PDB header: transport proteinChain: A: PDB Molecule: sulfate transporter sulfate transporter family protein;PDBTitle: crystal structure of sulfate transporter family protein from wolinella2 succinogenes
35 c2h29A_
not modelled
10.8
30
PDB header: transferaseChain: A: PDB Molecule: probable nicotinate-nucleotidePDBTitle: crystal structure of nicotinic acid mononucleotide2 adenylyltransferase from staphylococcus aureus: product3 bound form 1
36 c3hhhA_
not modelled
10.7
38
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional regulator, padr family;PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583
37 d2dkfa1
not modelled
10.4
32
Fold: Metallo-hydrolase/oxidoreductaseSuperfamily: Metallo-hydrolase/oxidoreductaseFamily: beta-CASP RNA-metabolising hydrolases38 c2f9jP_
not modelled
10.1
64
PDB header: rna binding proteinChain: P: PDB Molecule: splicing factor 3b subunit 1;PDBTitle: 3.0 angstrom resolution structure of a y22m mutant of the spliceosomal2 protein p14 bound to a region of sf3b155
39 d2cbia3
not modelled
9.8
23
Fold: Zincin-likeSuperfamily: beta-N-acetylhexosaminidase-like domainFamily: Hyaluronidase N-terminal domain-like40 c2rmsB_
not modelled
9.8
35
PDB header: transcriptionChain: B: PDB Molecule: msin3a-binding protein;PDBTitle: solution structure of the msin3a pah1-sap25 sid complex
41 c3ixxE_
not modelled
9.5
33
PDB header: virusChain: E: PDB Molecule: peptide pr;PDBTitle: the pseudo-atomic structure of west nile immature virus in2 complex with fab fragments of the anti-fusion loop antibody3 e53
42 c3f8fA_
not modelled
9.5
25
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional regulator, padr-like family;PDBTitle: crystal structure of multidrug binding transcriptional regulator lmrr2 complexed with daunomycin
43 d2co5a1
not modelled
9.2
25
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: F93-like44 c2p7vA_
not modelled
9.1
23
PDB header: transcriptionChain: A: PDB Molecule: regulator of sigma d;PDBTitle: crystal structure of the escherichia coli regulator of sigma 70, rsd,2 in complex with sigma 70 domain 4
45 c3hkzZ_
not modelled
9.1
33
PDB header: transferaseChain: Z: PDB Molecule: dna-directed rna polymerase subunit 13;PDBTitle: the x-ray crystal structure of rna polymerase from archaea
46 d1xzpa3
not modelled
9.1
64
Fold: Folate-binding domainSuperfamily: Folate-binding domainFamily: TrmE formyl-THF-binding domain47 c1xzqB_
not modelled
9.1
64
PDB header: hydrolaseChain: B: PDB Molecule: probable trna modification gtpase trme;PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
48 d1hcra_
not modelled
8.7
21
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Recombinase DNA-binding domain49 d1ijwc_
not modelled
8.6
21
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Recombinase DNA-binding domain50 c3kzwD_
not modelled
8.6
62
PDB header: hydrolaseChain: D: PDB Molecule: cytosol aminopeptidase;PDBTitle: crystal structure of cytosol aminopeptidase from staphylococcus aureus2 col
51 d1uptb_
not modelled
8.6
35
Fold: GRIP domainSuperfamily: GRIP domainFamily: GRIP domain52 d2i9wa3
not modelled
8.5
55
Fold: Sec-C motifSuperfamily: Sec-C motifFamily: Sec-C motif53 d1uptd_
not modelled
8.2
35
Fold: GRIP domainSuperfamily: GRIP domainFamily: GRIP domain54 c3ut2B_
not modelled
8.1
15
PDB header: oxidoreductaseChain: B: PDB Molecule: catalase-peroxidase 2;PDBTitle: crystal structure of fungal magkatg2
55 c3tsjA_
not modelled
8.0
18
PDB header: allergen, oxidoreductaseChain: A: PDB Molecule: pollen allergen phl p 4;PDBTitle: crystal structure of phl p 4, a grass pollen allergen with glucose2 dehydrogenase activity
56 d1mg7a1
not modelled
7.9
60
Fold: Ribosomal protein S5 domain 2-likeSuperfamily: Ribosomal protein S5 domain 2-likeFamily: Early switch protein XOL-1, N-terminal domain57 d3dssb1
not modelled
7.9
19
Fold: alpha/alpha toroidSuperfamily: Terpenoid cyclases/Protein prenyltransferasesFamily: Protein prenyltransferases58 c3c6rE_
not modelled
7.7
42
PDB header: virusChain: E: PDB Molecule: peptide pr;PDBTitle: low ph immature dengue virus
59 d1sv0a_
not modelled
7.7
18
Fold: SAM domain-likeSuperfamily: SAM/Pointed domainFamily: Pointed domain60 c3lvtA_
not modelled
7.7
27
PDB header: hydrolaseChain: A: PDB Molecule: glycosyl hydrolase, family 38;PDBTitle: the crystal structure of a protein in the glycosyl hydrolase2 family 38 from enterococcus faecalis to 2.55a
61 c2wyhA_
not modelled
7.7
33
PDB header: hydrolaseChain: A: PDB Molecule: alpha-mannosidase;PDBTitle: structure of the streptococcus pyogenes family gh38 alpha-2 mannosidase
62 c3peiA_
not modelled
7.6
62
PDB header: hydrolaseChain: A: PDB Molecule: cytosol aminopeptidase;PDBTitle: crystal structure of cytosol aminopeptidase from francisella2 tularensis
63 c3c6eC_
not modelled
7.6
42
PDB header: viral proteinChain: C: PDB Molecule: prm;PDBTitle: crystal structure of the precursor membrane protein- envelope protein2 heterodimer from the dengue 2 virus at neutral ph
64 c3ij3A_
not modelled
7.6
54
PDB header: hydrolaseChain: A: PDB Molecule: cytosol aminopeptidase;PDBTitle: 1.8 angstrom resolution crystal structure of cytosol aminopeptidase2 from coxiella burnetii
65 c2e8pA_
not modelled
7.4
22
PDB header: signaling proteinChain: A: PDB Molecule: elf3 protein;PDBTitle: solution structure of the n-terminal sam-domain of e74-like2 factor 3
66 c3bk2A_
not modelled
7.3
22
PDB header: hydrolaseChain: A: PDB Molecule: metal dependent hydrolase;PDBTitle: crystal structure analysis of the rnase j/ump complex
67 d2c1ia2
not modelled
7.3
18
Fold: Peptidoglycan deacetylase N-terminal noncatalytic regionSuperfamily: Peptidoglycan deacetylase N-terminal noncatalytic regionFamily: Peptidoglycan deacetylase N-terminal noncatalytic region68 c3pqhB_
not modelled
7.3
23
PDB header: viral proteinChain: B: PDB Molecule: gene product 138;PDBTitle: crystal structure of the c-terminal fragment of the bacteriophage2 phi92 membrane-piercing protein gp138
69 c4efdF_
not modelled
7.3
54
PDB header: hydrolaseChain: F: PDB Molecule: aminopeptidase;PDBTitle: crystal structure of an m17 aminopeptidase from trypanosoma brucei,2 tb427tmp.02.4440
70 c3e37B_
not modelled
7.2
18
PDB header: transferaseChain: B: PDB Molecule: protein farnesyltransferase subunit beta;PDBTitle: protein farnesyltransferase complexed with bisubstrate2 ethylenediamine scaffold inhibitor 5
71 c4b1oQ_
not modelled
7.1
27
PDB header: transferase/dnaChain: Q: PDB Molecule: rna polymerase subunit 13;PDBTitle: archaeal rnap-dna binary complex at 4.32ang
72 c4esfA_
not modelled
7.1
38
PDB header: transcriptionChain: A: PDB Molecule: padr-like transcriptional regulator;PDBTitle: crystal structure of padr-like transcriptional regulator (bce3449)2 from bacillus cereus strain atcc 10987
73 c3h8gC_
not modelled
7.1
62
PDB header: hydrolaseChain: C: PDB Molecule: cytosol aminopeptidase;PDBTitle: bestatin complex structure of leucine aminopeptidase from pseudomonas2 putida
74 d1mtxa_
not modelled
7.1
100
Fold: Knottins (small inhibitors, toxins, lectins)Superfamily: Scorpion toxin-likeFamily: Short-chain scorpion toxins75 c3hkzY_
not modelled
7.0
33
PDB header: transferaseChain: Y: PDB Molecule: dna-directed rna polymerase subunit 13;PDBTitle: the x-ray crystal structure of rna polymerase from archaea
76 d1xmaa_
not modelled
6.9
18
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: PadR-like77 c1xmaA_
not modelled
6.9
18
PDB header: transcriptionChain: A: PDB Molecule: predicted transcriptional regulator;PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833
78 d1qwga_
not modelled
6.9
28
Fold: TIM beta/alpha-barrelSuperfamily: (2r)-phospho-3-sulfolactate synthase ComAFamily: (2r)-phospho-3-sulfolactate synthase ComA79 c4aclA_
not modelled
6.8
12
PDB header: protein transportChain: A: PDB Molecule: tssl;PDBTitle: 3d structure of dotu from francisella novicida
80 d1h2tc3
not modelled
6.8
28
Fold: alpha-alpha superhelixSuperfamily: ARM repeatFamily: MIF4G domain-like81 d2o5aa1
not modelled
6.8
26
Fold: NucleotidyltransferaseSuperfamily: NucleotidyltransferaseFamily: Iojap/YbeB-like82 c2waqQ_
not modelled
6.8
27
PDB header: transcriptionChain: Q: PDB Molecule: dna-directed rna polymerase rpo13 subunit;PDBTitle: the complete structure of the archaeal 13-subunit dna-2 directed rna polymerase
83 c4esbA_
not modelled
6.7
27
PDB header: transcriptionChain: A: PDB Molecule: transcriptional regulator, padr family;PDBTitle: crystal structure of padr-like transcriptional regulator (bc4206) from2 bacillus cereus strain atcc 14579
84 d2nxya1
not modelled
6.6
19
Fold: gp120 coreSuperfamily: gp120 coreFamily: gp120 core85 c3ri2B_
not modelled
6.5
22
PDB header: transcription regulatorChain: B: PDB Molecule: transcriptional regulator, padr-like family;PDBTitle: crystal structure of padr family transcriptional regulator from2 eggerthella lenta dsm 2243
86 c3pcoD_
not modelled
6.5
29
PDB header: ligaseChain: D: PDB Molecule: phenylalanyl-trna synthetase, beta chain;PDBTitle: crystal structure of e. coli phenylalanine-trna synthetase complexed2 with phenylalanine and amp
87 c2qjxA_
not modelled
6.4
23
PDB header: protein bindingChain: A: PDB Molecule: protein bim1;PDBTitle: structural basis of microtubule plus end tracking by2 xmap215, clip-170 and eb1
88 c2kzhA_
not modelled
6.4
36
PDB header: isomeraseChain: A: PDB Molecule: tryptophan biosynthesis protein trpcf;PDBTitle: three-dimensional structure of a truncated phosphoribosylanthranilate2 isomerase (residues 255-384) from escherichia coli
89 c4aboI_
not modelled
6.4
23
PDB header: structural proteinChain: I: PDB Molecule: microtubule integrity protein mal3;PDBTitle: mal3 ch domain homology model and mammalian tubulin (2xrp) docked2 into the 8.6-angstrom cryo-em map of mal3-gtpgammas-microtubules
90 c2p28A_
not modelled
6.4
43
PDB header: cell adhesionChain: A: PDB Molecule: integrin beta-2;PDBTitle: structure of the phe2 and phe3 fragments of the integrin beta2 subunit
91 c2kvsA_
not modelled
6.4
24
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein mw0776;PDBTitle: nmr solution structure of q7a1e8 protein from staphylococcus2 aureus: northeast structural genomics consortium target:3 zr215
92 d1hcfa_
not modelled
6.4
13
Fold: Cystine-knot cytokinesSuperfamily: Cystine-knot cytokinesFamily: Neurotrophin93 c3kihC_
not modelled
6.4
29
PDB header: sugar binding proteinChain: C: PDB Molecule: 5-bladed -propeller lectin;PDBTitle: the crystal structures of two fragments truncated from 5-bladed -2 propeller lectin, tachylectin-2 (lib2-d2-15)
94 d1sxma_
not modelled
6.3
100
Fold: Knottins (small inhibitors, toxins, lectins)Superfamily: Scorpion toxin-likeFamily: Short-chain scorpion toxins95 c3qq5A_
not modelled
6.2
60
PDB header: oxidoreductaseChain: A: PDB Molecule: small gtp-binding protein;PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
96 d1ok8a1
not modelled
6.2
27
Fold: Immunoglobulin-like beta-sandwichSuperfamily: E set domainsFamily: Class II viral fusion proteins C-terminal domain97 c4arpB_
not modelled
6.1
35
PDB header: hydrolaseChain: B: PDB Molecule: pesticin;PDBTitle: structure of the inactive pesticin e178a mutant
98 c2hc9A_
not modelled
6.1
69
PDB header: hydrolaseChain: A: PDB Molecule: leucine aminopeptidase 1;PDBTitle: structure of caenorhabditis elegans leucine aminopeptidase-zinc2 complex (lap1)
99 d1pjwa_
not modelled
6.0
31
Fold: Immunoglobulin-like beta-sandwichSuperfamily: E set domainsFamily: Class II viral fusion proteins C-terminal domain
