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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c3ixxE_ | PDB header: virus | Chain: E: PDB Molecule: peptide pr; | PDBTitle: the pseudo-atomic structure of west nile immature virus in2 complex with fab fragments of the anti-fusion loop antibody3 e53 |
| Added to library: Sun Aug 29 06:22:46 2010 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | L | S | N | F | Q | G | K | V | M | M | T | V | N | A | T | D | V | T | D | V | I | T | I | P | T | A | A | G | K | N | L | C | I | V | R | A | M | D | V | G | Y | M | C | D | D | T | I | T | Y | E | C | P | V | L | S | A | G | N | D | P | E | D | I | D | C | W | C | T | K | S |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | S | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | B | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | B | S | S | S | S | ![]() | ![]() | ![]() | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | ||||||||||
| Sequence | A | V | Y | V | R | Y | G | R | C | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() |
| Download: | PDB structure | FASTA sequence |
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