Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionO13525
DateMon Jul 2 19:10:08 BST 2012
Unique Job IDbc7305d66fcb2afe

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3kb4D_
Top template information
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:alr8543 protein;
PDBTitle: crystal structure of the alr8543 protein in complex with2 geranylgeranyl monophosphate and magnesium ion from nostoc sp. pcc3 7120, northeast structural genomics consortium target nsr141
Confidence and coverage
Confidence:100.0% Coverage: 62%
207 residues ( 62% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MLRLSLLRSTATLPVKCQRRGLILPAAAMYTLGSLIFGKEARLADAMERGELHNKNVDYA
Secondary structure 
SS confidence 
Disorder  ?????????????
???????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  KEAEERTELRIRALANTRPMEPRYNGHVPLHRYEKLLLFAISGWNSFFHPEDGYNIVQLG
Secondary structure 
SS confidence 
Disorder 
?????????
?
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  EATALPVFLENLKQTMLSDSSGRRILKEQPNITTEILHMDKLAKLPHNTFGYVYYQWLKR
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  ENVSPDTRAPVKFIDDPMHAYIFKRYRQCHDFYHAITNMPIIIEGEITIKALEGANLGVP
Secondary structure 
SS confidence 
Disorder 
??
???
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  MAILGGILAPLRLKKVQRKRLYNIYLPWAVRTGLSCKPLINVYWEEMLEKDVTALRKELK
Secondary structure 
SS confidence 
Disorder 
??
??
Disorder confidence 
 
   .........310.........320.........330.....
Sequence  ITLPPDLRTMRKERAALRKEIDAKYNSQKRATTPA
Secondary structure 
SS confidence 
Disorder 
??????????
???????????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3kb4 chain D

3D model

Region: 90 - 303
Aligned: 207
Modelled: 214
Confidence: 100.0%
Identity: 19%
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:alr8543 protein;
PDBTitle: crystal structure of the alr8543 protein in complex with2 geranylgeranyl monophosphate and magnesium ion from nostoc sp. pcc3 7120, northeast structural genomics consortium target nsr141

Phyre2

PDB 3msq chain C

3D model

Region: 99 - 302
Aligned: 195
Modelled: 204
Confidence: 100.0%
Identity: 18%
PDB header:biosynthetic protein
Chain: C: PDB Molecule:putative ubiquinone biosynthesis protein;
PDBTitle: crystal structure of a putative ubiquinone biosynthesis protein2 (npun02000094) from nostoc punctiforme pcc 73102 at 2.85 a resolution

Phyre2

PDB 1eex chain G

3D model

Region: 306 - 332
Aligned: 27
Modelled: 27
Confidence: 37.4%
Identity: 19%
Fold: Open three-helical up-and-down bundle
Superfamily: Diol dehydratase, gamma subunit
Family: Diol dehydratase, gamma subunit

Phyre2

PDB 2l6g chain A

3D model

Region: 70 - 98
Aligned: 22
Modelled: 29
Confidence: 36.1%
Identity: 41%
PDB header:transferase,cell adhesion
Chain: A: PDB Molecule:focal adhesion kinase 1, linker, paxillin;
PDBTitle: fat-ld2 double labeled construct with free ld4 peptide

Phyre2

PDB 1uc5 chain M

3D model

Region: 306 - 332
Aligned: 27
Modelled: 27
Confidence: 33.9%
Identity: 19%
PDB header:lyase
Chain: M: PDB Molecule:diol dehydrase gamma subunit;
PDBTitle: structure of diol dehydratase complexed with (r)-1,2-2 propanediol

Phyre2

PDB 1iwp chain G

3D model

Region: 306 - 332
Aligned: 27
Modelled: 27
Confidence: 30.3%
Identity: 19%
Fold: Open three-helical up-and-down bundle
Superfamily: Diol dehydratase, gamma subunit
Family: Diol dehydratase, gamma subunit

Phyre2

PDB 2lna chain A

3D model

Region: 286 - 304
Aligned: 19
Modelled: 19
Confidence: 28.9%
Identity: 26%
PDB header:hydrolase
Chain: A: PDB Molecule:afg3-like protein 2;
PDBTitle: solution nmr structure of the mitochondrial inner membrane domain2 (residues 164-251), ftsh_ext, from the paraplegin-like protein afg3l23 from homo sapiens, northeast structural genomics consortium target4 hr6741a

Phyre2

PDB 3r4h chain D

3D model

Region: 306 - 323
Aligned: 18
Modelled: 18
Confidence: 26.4%
Identity: 39%
PDB header:de novo protein
Chain: D: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22

Phyre2

PDB 3r4a chain A

3D model

Region: 306 - 323
Aligned: 18
Modelled: 18
Confidence: 25.7%
Identity: 39%
PDB header:de novo protein
Chain: A: PDB Molecule:coiled coil helix cc-tet;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet

Phyre2

PDB 3r4a chain C

3D model

Region: 306 - 323
Aligned: 18
Modelled: 18
Confidence: 25.5%
Identity: 39%
PDB header:de novo protein
Chain: C: PDB Molecule:coiled coil helix cc-tet;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet

Phyre2

PDB 3r4a chain D

3D model

Region: 306 - 323
Aligned: 18
Modelled: 18
Confidence: 25.4%
Identity: 39%
PDB header:de novo protein
Chain: D: PDB Molecule:coiled coil helix cc-tet;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet

Phyre2

PDB 2uv1 chain B

3D model

Region: 39 - 50
Aligned: 12
Modelled: 12
Confidence: 25.3%
Identity: 75%
PDB header:inhibitor
Chain: B: PDB Molecule:host-nuclease inhibitor protein gam;
PDBTitle: hexagonal crystal form of gams from bacteriophage lambda.

Phyre2

PDB 3r4h chain F

3D model

Region: 306 - 323
Aligned: 18
Modelled: 18
Confidence: 25.2%
Identity: 39%
PDB header:de novo protein
Chain: F: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22

Phyre2

PDB 3r4a chain B

3D model

Region: 306 - 323
Aligned: 18
Modelled: 18
Confidence: 25.0%
Identity: 39%
PDB header:de novo protein
Chain: B: PDB Molecule:coiled coil helix cc-tet;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet

Phyre2

PDB 3r4h chain B

3D model

Region: 306 - 323
Aligned: 18
Modelled: 18
Confidence: 24.8%
Identity: 39%
PDB header:de novo protein
Chain: B: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22

Phyre2

PDB 3r4h chain C

3D model

Region: 306 - 323
Aligned: 18
Modelled: 18
Confidence: 24.8%
Identity: 39%
PDB header:de novo protein
Chain: C: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22

Phyre2

PDB 3r4h chain A

3D model

Region: 306 - 323
Aligned: 18
Modelled: 18
Confidence: 24.8%
Identity: 39%
PDB header:de novo protein
Chain: A: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22

Phyre2

PDB 3r4h chain E

3D model

Region: 309 - 323
Aligned: 15
Modelled: 15
Confidence: 23.6%
Identity: 40%
PDB header:de novo protein
Chain: E: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22

Phyre2

PDB 3dka chain A

3D model

Region: 292 - 307
Aligned: 16
Modelled: 16
Confidence: 18.9%
Identity: 19%
PDB header:unknown function
Chain: A: PDB Molecule:dinb-like protein;
PDBTitle: crystal structure of a dinb-like protein (yjoa, bsu12410) from2 bacillus subtilis at 2.30 a resolution

Phyre2

PDB 1a9x chain A domain 1

3D model

Region: 159 - 303
Aligned: 100
Modelled: 108
Confidence: 16.9%
Identity: 18%
Fold: Carbamoyl phosphate synthetase, large subunit connection domain
Superfamily: Carbamoyl phosphate synthetase, large subunit connection domain
Family: Carbamoyl phosphate synthetase, large subunit connection domain

Phyre2
1
c3kb4D_
2
c3msqC_
3
d1eexg_
4
c2l6gA_
5
c1uc5M_
6
d1iwpg_
7
c2lnaA_
8
c3r4hD_
9
c3r4aA_
10
c3r4aC_
11
c3r4aD_
12
c2uv1B_
13
c3r4hF_
14
c3r4aB_
15
c3r4hB_
16
c3r4hC_
17
c3r4hA_
18
c3r4hE_
19
c3dkaA_
20
d1a9xa1
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3kb4D_
100.0 19 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:alr8543 protein;
PDBTitle: crystal structure of the alr8543 protein in complex with2 geranylgeranyl monophosphate and magnesium ion from nostoc sp. pcc3 7120, northeast structural genomics consortium target nsr141
2c3msqC_
100.0 18 PDB header:biosynthetic protein
Chain: C: PDB Molecule:putative ubiquinone biosynthesis protein;
PDBTitle: crystal structure of a putative ubiquinone biosynthesis protein2 (npun02000094) from nostoc punctiforme pcc 73102 at 2.85 a resolution
3d1eexg_
37.4 19 Fold:Open three-helical up-and-down bundle
Superfamily:Diol dehydratase, gamma subunit
Family:Diol dehydratase, gamma subunit
4c2l6gA_
36.1 41 PDB header:transferase,cell adhesion
Chain: A: PDB Molecule:focal adhesion kinase 1, linker, paxillin;
PDBTitle: fat-ld2 double labeled construct with free ld4 peptide
5c1uc5M_
33.9 19 PDB header:lyase
Chain: M: PDB Molecule:diol dehydrase gamma subunit;
PDBTitle: structure of diol dehydratase complexed with (r)-1,2-2 propanediol
6d1iwpg_
30.3 19 Fold:Open three-helical up-and-down bundle
Superfamily:Diol dehydratase, gamma subunit
Family:Diol dehydratase, gamma subunit
7c2lnaA_
28.9 26 PDB header:hydrolase
Chain: A: PDB Molecule:afg3-like protein 2;
PDBTitle: solution nmr structure of the mitochondrial inner membrane domain2 (residues 164-251), ftsh_ext, from the paraplegin-like protein afg3l23 from homo sapiens, northeast structural genomics consortium target4 hr6741a
8c3r4hD_
26.4 39 PDB header:de novo protein
Chain: D: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22
9c3r4aA_
25.7 39 PDB header:de novo protein
Chain: A: PDB Molecule:coiled coil helix cc-tet;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet
10c3r4aC_
25.5 39 PDB header:de novo protein
Chain: C: PDB Molecule:coiled coil helix cc-tet;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet
11c3r4aD_
25.4 39 PDB header:de novo protein
Chain: D: PDB Molecule:coiled coil helix cc-tet;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet
12c2uv1B_
25.3 75 PDB header:inhibitor
Chain: B: PDB Molecule:host-nuclease inhibitor protein gam;
PDBTitle: hexagonal crystal form of gams from bacteriophage lambda.
13c3r4hF_
25.2 39 PDB header:de novo protein
Chain: F: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22
14c3r4aB_
25.0 39 PDB header:de novo protein
Chain: B: PDB Molecule:coiled coil helix cc-tet;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet
15c3r4hB_
24.8 39 PDB header:de novo protein
Chain: B: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22
16c3r4hC_
24.8 39 PDB header:de novo protein
Chain: C: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22
17c3r4hA_
24.8 39 PDB header:de novo protein
Chain: A: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22
18c3r4hE_
23.6 40 PDB header:de novo protein
Chain: E: PDB Molecule:coiled coil helix cc-tet-phi22;
PDBTitle: crystal structure of the 4-helix coiled coil cc-tet-phi22
19c3dkaA_
18.9 19 PDB header:unknown function
Chain: A: PDB Molecule:dinb-like protein;
PDBTitle: crystal structure of a dinb-like protein (yjoa, bsu12410) from2 bacillus subtilis at 2.30 a resolution
20d1a9xa1
16.9 18 Fold:Carbamoyl phosphate synthetase, large subunit connection domain
Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain
Family:Carbamoyl phosphate synthetase, large subunit connection domain
21c2k7rA_
not modelled 15.5 18 PDB header:replication
Chain: A: PDB Molecule:primosomal protein dnai;
PDBTitle: n-terminal domain of the bacillus subtilis helicase-loading2 protein dnai
22c1or7A_
not modelled 15.4 6 PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma-e factor;
PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea
23c1ykuB_
not modelled 15.2 18 PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein pxo2-61;
PDBTitle: crystal structure of a sensor domain homolog
24d2f23a1
not modelled 15.0 30 Fold:Long alpha-hairpin
Superfamily:GreA transcript cleavage protein, N-terminal domain
Family:GreA transcript cleavage protein, N-terminal domain
25d2pjqa1
not modelled 14.2 7 Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
26c2vcbA_
not modelled 13.7 27 PDB header:hydrolase
Chain: A: PDB Molecule:alpha-n-acetylglucosaminidase;
PDBTitle: family 89 glycoside hydrolase from clostridium perfringens2 in complex with pugnac
27c3gw7A_
not modelled 13.5 16 PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein yedj;
PDBTitle: crystal structure of a metal-dependent phosphohydrolase2 with conserved hd domain (yedj) from escherichia coli in3 complex with nickel ions. northeast structural genomics4 consortium target er63
28c2ff4B_
not modelled 13.3 20 PDB header:transcription
Chain: B: PDB Molecule:probable regulatory protein embr;
PDBTitle: mycobacterium tuberculosis embr in complex with low affinity2 phosphopeptide
29c3pmdA_
not modelled 12.3 19 PDB header:lipid binding protein
Chain: A: PDB Molecule:conserved domain protein;
PDBTitle: crystal structure of the sporulation inhibitor pxo1-118 from bacillus2 anthracis
30d1yfna1
not modelled 12.1 29 Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
31c3d5pB_
not modelled 11.9 23 PDB header:gene regulation
Chain: B: PDB Molecule:putative glucan synthesis regulator of smi1/knr4 family;
PDBTitle: crystal structure of a putative glucan synthesis regulator of2 smi1/knr4 family (bf1740) from bacteroides fragilis nctc 9343 at 1.453 a resolution
32c3zs9C_
not modelled 11.8 38 PDB header:hydrolase/transport protein
Chain: C: PDB Molecule:golgi to er traffic protein 2;
PDBTitle: s. cerevisiae get3-adp-alf4- complex with a cytosolic get2 fragment
33d1ou9a_
not modelled 11.4 36 Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
34d1ou8a_
not modelled 11.3 36 Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
35c3zs9D_
not modelled 11.2 38 PDB header:hydrolase/transport protein
Chain: D: PDB Molecule:golgi to er traffic protein 2;
PDBTitle: s. cerevisiae get3-adp-alf4- complex with a cytosolic get2 fragment
36d3dtoa1
not modelled 10.8 9 Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
37d1zszc1
not modelled 10.7 29 Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
38d1ufia_
not modelled 10.4 24 Fold:ROP-like
Superfamily:Dimerisation domain of CENP-B
Family:Dimerisation domain of CENP-B
39d1b76a2
not modelled 10.2 27 Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
40d2prva1
not modelled 10.2 14 Fold:SMI1/KNR4-like
Superfamily:SMI1/KNR4-like
Family:SMI1/KNR4-like
41d3proc1
not modelled 9.5 21 Fold:Alpha-lytic protease prodomain-like
Superfamily:Alpha-lytic protease prodomain
Family:Alpha-lytic protease prodomain
42c3hugA_
not modelled 9.4 14 PDB header:transcription/membrane protein
Chain: A: PDB Molecule:rna polymerase sigma factor;
PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
43d1or7a1
not modelled 9.1 6 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
44d1ka8a_
not modelled 8.5 5 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:P4 origin-binding domain-like
45d1xu2r_
not modelled 8.1 55 Fold:TNF receptor-like
Superfamily:TNF receptor-like
Family:BAFF receptor-like
46c1xu2R_
not modelled 8.1 55 PDB header:cytokine, hormone/growth factor receptor
Chain: R: PDB Molecule:tumor necrosis factor receptor superfamily member 17;
PDBTitle: the crystal structure of april bound to bcma
47d1m9fd_
not modelled 7.9 22 Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
48d1aisb1
not modelled 7.9 14 Fold:Cyclin-like
Superfamily:Cyclin-like
Family:Transcription factor IIB (TFIIB), core domain
49d1k1xa1
not modelled 7.9 25 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Families 57/38 glycoside transferase middle domain
Family:4-alpha-glucanotransferase, domain 2
50c3sjdE_
not modelled 7.8 33 PDB header:hydrolase/transport protein
Chain: E: PDB Molecule:golgi to er traffic protein 2;
PDBTitle: crystal structure of s. cerevisiae get3 with bound adp-mg2+ in complex2 with get2 cytosolic domain
51d2g4ca2
not modelled 7.8 32 Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
52d2pq7a1
not modelled 7.7 14 Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
53d2paga1
not modelled 7.6 19 Fold:SMI1/KNR4-like
Superfamily:SMI1/KNR4-like
Family:SMI1/KNR4-like
54d3djba1
not modelled 7.6 6 Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
55d2icga1
not modelled 7.6 10 Fold:SMI1/KNR4-like
Superfamily:SMI1/KNR4-like
Family:SMI1/KNR4-like
56d1y0ua_
not modelled 7.5 11 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
57c2auaB_
not modelled 7.5 36 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: structure of bc2332: a protein of unknown function from bacillus2 cereus
58c1ufiD_
not modelled 7.5 23 PDB header:dna binding protein
Chain: D: PDB Molecule:major centromere autoantigen b;
PDBTitle: crystal structure of the dimerization domain of human cenp-b
59c2jo8B_
not modelled 7.4 30 PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase 4;
PDBTitle: solution structure of c-terminal domain of human mammalian2 sterile 20-like kinase 1 (mst1)
60c3ikmC_
not modelled 7.3 32 PDB header:transferase
Chain: C: PDB Molecule:dna polymerase subunit gamma-2;
PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme
61d2r7ca2
not modelled 6.9 30 Fold:Rotavirus NSP2 fragment, N-terminal domain
Superfamily:Rotavirus NSP2 fragment, N-terminal domain
Family:Rotavirus NSP2 fragment, N-terminal domain
62d2ff4a2
not modelled 6.9 30 Fold:alpha-alpha superhelix
Superfamily:TPR-like
Family:BTAD-like
63c2a3dA_
not modelled 6.6 47 PDB header:three-helix bundle
Chain: A: PDB Molecule:protein (de novo three-helix bundle);
PDBTitle: solution structure of a de novo designed single chain three-2 helix bundle (a3d)
64c3nr7A_
not modelled 6.6 17 PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding protein h-ns;
PDBTitle: crystal structure of s. typhimurium h-ns 1-83
65c2rq5A_
not modelled 6.4 16 PDB header:transcription
Chain: A: PDB Molecule:protein jumonji;
PDBTitle: solution structure of the at-rich interaction domain (arid)2 of jumonji/jarid2
66c2lfwA_
not modelled 6.4 9 PDB header:signaling protein
Chain: A: PDB Molecule:phyr sigma-like domain;
PDBTitle: nmr structure of the phyrsl-nepr complex from sphingomonas sp. fr1
67d1yira2
not modelled 6.3 13 Fold:alpha/beta-Hammerhead
Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like
Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like
68d2bpa1_
not modelled 6.3 22 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:ssDNA viruses
Family:Microviridae-like VP
69c2b6gA_
not modelled 6.3 15 PDB header:rna binding protein
Chain: A: PDB Molecule:vts1p;
PDBTitle: rna recognition by the vts1 sam domain
70c2fmmE_
not modelled 6.3 20 PDB header:transcription
Chain: E: PDB Molecule:protein emsy;
PDBTitle: crystal structure of emsy-hp1 complex
71d1xl3c1
not modelled 6.1 25 Fold:Type III secretion system domain
Superfamily:Type III secretion system domain
Family:TyeA-like
72d1vaja1
not modelled 6.1 13 Fold:AMMECR1-like
Superfamily:AMMECR1-like
Family:AMMECR1-like
73c2ylaA_
not modelled 6.1 18 PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis
74d1kvpa_
not modelled 5.9 36 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:ssDNA viruses
Family:Microviridae-like VP
75d2ivda2
not modelled 5.7 13 Fold:FAD-linked reductases, C-terminal domain
Superfamily:FAD-linked reductases, C-terminal domain
Family:L-aminoacid/polyamine oxidase
76d1mtyg_
not modelled 5.7 19 Fold:Open three-helical up-and-down bundle
Superfamily:Methane monooxygenase hydrolase, gamma subunit
Family:Methane monooxygenase hydrolase, gamma subunit
77c3mzyA_
not modelled 5.7 16 PDB header:rna binding protein
Chain: A: PDB Molecule:rna polymerase sigma-h factor;
PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
78c2l6fA_
not modelled 5.5 21 PDB header:transferase,cell adhesion
Chain: A: PDB Molecule:focal adhesion kinase 1, linker1, paxillin, linker2,
PDBTitle: nmr solution structure of fat domain of fak complexed with ld2 and ld42 motifs of paxillin
79d1atia2
not modelled 5.4 27 Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
80d1seza2
not modelled 5.4 18 Fold:FAD-linked reductases, C-terminal domain
Superfamily:FAD-linked reductases, C-terminal domain
Family:L-aminoacid/polyamine oxidase
81d1g5ha2
not modelled 5.3 23 Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
82d1ybea2
not modelled 5.3 17 Fold:alpha/beta-Hammerhead
Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like
Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite