PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3msqC_

Fold library id	PDB Header	Molecule	Title
c3msqC_	PDB header: biosynthetic protein	Chain: C: PDB Molecule: putative ubiquinone biosynthesis protein;	PDBTitle: crystal structure of a putative ubiquinone biosynthesis protein2 (npun02000094) from nostoc punctiforme pcc 73102 at 2.85 a resolution

Links to external resources
Added to library: Sat Aug 28 23:38:13 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T Y N N D K G L L A Y I Q F L A S S A Q G N T D R V F D F E D A L D Q T Q X A Q L A V D E L K K I P E V N A L F S E R W L P A P F N L D D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T T S T T S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A K L P E G T L G H V Y A R E X K A R F Y K K V P V V D D I S Y L K X L W R S T H D I Y H V V A G F D T N V F G E I G L Q A F F L A Q T P I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T B
S T
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . .

Sequence P I S V X L L S F G X V X I S L Y Q P T N F K A L X T E I S R G Y R V G S H T P G K L I A Q K W D Q L W D V Q V S E I R E R L G V N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
S
S T T
G G G S T T S B T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	Y	N	N	D	K	G	L	L	A	Y	I	Q	F	L	A	S	S	A	Q	G	N	T	D	R	V	F	D	F	E	D	A	L	D	Q	T	Q	X	A	Q	L	A	V	D	E	L	K	K	I	P	E	V	N	A	L	F	S	E	R	W	L	P	A	P	F	N	L	D	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T														T	T	T	S											T	T	S										T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	K	L	P	E	G	T	L	G	H	V	Y	A	R	E	X	K	A	R	F	Y	K	K	V	P	V	V	D	D	I	S	Y	L	K	X	L	W	R	S	T	H	D	I	Y	H	V	V	A	G	F	D	T	N	V	F	G	E	I	G	L	Q	A	F	F	L	A	Q	T	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S		T	T	B																					S																					T			S	S															S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Sequence	P	I	S	V	X	L	L	S	F	G	X	V	X	I	S	L	Y	Q	P	T	N	F	K	A	L	X	T	E	I	S	R	G	Y	R	V	G	S	H	T	P	G	K	L	I	A	Q	K	W	D	Q	L	W	D	V	Q	V	S	E	I	R	E	R	L	G	V	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			G	G	G																	T			S		S	T	T			G	G	G	S	T	T	S	B									T	S