Emaill.a.kelley@imperial.ac.uk
DescriptionQ1PH25
DateThu Jan 5 12:33:27 GMT 2012
Unique Job IDfa4e939289b68800

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3ne8A_



99.9 51 PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase;
PDBTitle: the crystal structure of a domain from n-acetylmuramoyl-l-alanine2 amidase of bartonella henselae str. houston-1
2d1jwqa_



99.9 47 Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:N-acetylmuramoyl-L-alanine amidase-like
3c3czxA_



99.9 28 PDB header:hydrolase
Chain: A: PDB Molecule:putative n-acetylmuramoyl-l-alanine amidase;
PDBTitle: the crystal structure of the putative n-acetylmuramoyl-l-2 alanine amidase from neisseria meningitidis
4c3qayC_



99.8 15 PDB header:lyase
Chain: C: PDB Molecule:endolysin;
PDBTitle: catalytic domain of cd27l endolysin targeting clostridia difficile
5c1xovA_



99.8 18 PDB header:hydrolase
Chain: A: PDB Molecule:ply protein;
PDBTitle: the crystal structure of the listeria monocytogenes bacteriophage psa2 endolysin plypsa
6d1xova2



99.8 18 Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:N-acetylmuramoyl-L-alanine amidase-like
7d1nyra1



85.2 10 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
8d2g4ca1



82.5 9 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
9d1g5ha1



81.5 10 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
10d1nj1a1



77.6 24 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
11d1wu7a1



77.1 20 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
12d1qf6a1



75.7 8 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
13c1y80A_



70.9 24 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted cobalamin binding protein;
PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica
14d1qe0a1



70.0 22 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
15d1ccwa_



69.2 19 Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
16d3bula2



69.1 17 Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
17c1nj2A_



67.0 24 PDB header:ligase
Chain: A: PDB Molecule:proline-trna synthetase;
PDBTitle: crystal structure of prolyl-trna synthetase from methanothermobacter2 thermautotrophicus
18c1u83A_



64.2 16 PDB header:lyase
Chain: A: PDB Molecule:phosphosulfolactate synthase;
PDBTitle: psl synthase from bacillus subtilis
19d1u83a_



64.2 16 Fold:TIM beta/alpha-barrel
Superfamily:(2r)-phospho-3-sulfolactate synthase ComA
Family:(2r)-phospho-3-sulfolactate synthase ComA
20c1fyfB_



62.9 8 PDB header:ligase
Chain: B: PDB Molecule:threonyl-trna synthetase;
PDBTitle: crystal structure of a truncated form of threonyl-trna2 synthetase complexed with a seryl adenylate analog
21c1g5hA_



not modelled 62.2 10 PDB header:dna binding protein
Chain: A: PDB Molecule:mitochondrial dna polymerase accessory subunit;
PDBTitle: crystal structure of the accessory subunit of murine mitochondrial2 polymerase gamma
22c2yxbA_



not modelled 59.0 26 PDB header:isomerase
Chain: A: PDB Molecule:coenzyme b12-dependent mutase;
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
23c3netB_



not modelled 58.5 19 PDB header:ligase
Chain: B: PDB Molecule:histidyl-trna synthetase;
PDBTitle: crystal structure of histidyl-trna synthetase from nostoc sp. pcc 7120
24d1nj8a1



not modelled 58.3 16 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
25d1fmfa_



not modelled 57.0 18 Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
26c2vefB_



not modelled 55.9 35 PDB header:transferase
Chain: B: PDB Molecule:dihydropteroate synthase;
PDBTitle: dihydropteroate synthase from streptococcus pneumoniae
27c2i4lC_



not modelled 54.6 17 PDB header:ligase
Chain: C: PDB Molecule:proline-trna ligase;
PDBTitle: rhodopseudomonas palustris prolyl-trna synthetase
28c2qvpC_



not modelled 53.4 20 PDB header:hydrolase
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative metallopeptidase (sama_0725) from2 shewanella amazonensis sb2b at 2.00 a resolution
29c1vmeB_



not modelled 53.0 17 PDB header:electron transport
Chain: B: PDB Molecule:flavoprotein;
PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution
30c2hqbA_



not modelled 51.3 14 PDB header:transcription
Chain: A: PDB Molecule:transcriptional activator of comk gene;
PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans
31c2j3mA_



not modelled 50.3 10 PDB header:ligase
Chain: A: PDB Molecule:prolyl-trna synthetase;
PDBTitle: prolyl-trna synthetase from enterococcus faecalis complexed2 with atp, manganese and prolinol
32c3rfqC_



not modelled 50.2 18 PDB header:biosynthetic protein
Chain: C: PDB Molecule:pterin-4-alpha-carbinolamine dehydratase moab2;
PDBTitle: crystal structure of pterin-4-alpha-carbinolamine dehydratase moab22 from mycobacterium marinum
33c3hriF_



not modelled 49.1 18 PDB header:ligase
Chain: F: PDB Molecule:histidyl-trna synthetase;
PDBTitle: histidyl-trna synthetase (apo) from trypanosoma brucei
34c3i3wB_



not modelled 48.0 30 PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucosamine mutase;
PDBTitle: structure of a phosphoglucosamine mutase from francisella tularensis
35c2an1D_



not modelled 47.8 16 PDB header:transferase
Chain: D: PDB Molecule:putative kinase;
PDBTitle: structural genomics, the crystal structure of a putative kinase from2 salmonella typhimurim lt2
36c1bmtB_



not modelled 46.1 17 PDB header:methyltransferase
Chain: B: PDB Molecule:methionine synthase;
PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
37c3b2yB_



not modelled 45.1 19 PDB header:hydrolase
Chain: B: PDB Molecule:metallopeptidase containing co-catalytic metalloactive
PDBTitle: crystal structure of a putative metallopeptidase (sden_2526) from2 shewanella denitrificans os217 at 1.74 a resolution
38c1ggmB_



not modelled 44.9 13 PDB header:ligase
Chain: B: PDB Molecule:protein (glycyl-trna synthetase);
PDBTitle: glycyl-trna synthetase from thermus thermophilus complexed with2 glycyl-adenylate
39d2naca2



not modelled 43.7 24 Fold:Flavodoxin-like
Superfamily:Formate/glycerate dehydrogenase catalytic domain-like
Family:Formate/glycerate dehydrogenases, substrate-binding domain
40c1wu7A_



not modelled 43.6 20 PDB header:ligase
Chain: A: PDB Molecule:histidyl-trna synthetase;
PDBTitle: crystal structure of histidyl-trna synthetase from2 thermoplasma acidophilum
41c2fuvB_



not modelled 42.4 25 PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucomutase;
PDBTitle: phosphoglucomutase from salmonella typhimurium.
42c3ezxA_



not modelled 39.0 19 PDB header:transferase
Chain: A: PDB Molecule:monomethylamine corrinoid protein 1;
PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein
43c1atiA_



not modelled 38.7 13 PDB header:protein biosynthesis
Chain: A: PDB Molecule:glycyl-trna synthetase;
PDBTitle: crystal structure of glycyl-trna synthetase from thermus thermophilus
44c2gx8B_



not modelled 36.6 21 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:nif3-related protein;
PDBTitle: the crystal stucture of bacillus cereus protein related to nif3
45c3ikmC_



not modelled 36.2 7 PDB header:transferase
Chain: C: PDB Molecule:dna polymerase subunit gamma-2;
PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme
46d1hc7a1



not modelled 36.1 15 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
47c2is8A_



not modelled 36.0 13 PDB header:structural protein
Chain: A: PDB Molecule:molybdopterin biosynthesis enzyme, moab;
PDBTitle: crystal structure of the molybdopterin biosynthesis enzyme moab2 (ttha0341) from thermus theromophilus hb8
48c1c4gB_



not modelled 35.0 23 PDB header:transferase
Chain: B: PDB Molecule:protein (alpha-d-glucose 1-phosphate
PDBTitle: phosphoglucomutase vanadate based transition state analog2 complex
49c1qf6A_



not modelled 34.7 8 PDB header:ligase/rna
Chain: A: PDB Molecule:threonyl-trna synthetase;
PDBTitle: structure of e. coli threonyl-trna synthetase complexed with its2 cognate trna
50c4a26B_



not modelled 33.7 18 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative c-1-tetrahydrofolate synthase, cytoplasmic;
PDBTitle: the crystal structure of leishmania major n5,n10-2 methylenetetrahydrofolate dehydrogenase/cyclohydrolase
51d1atia1



not modelled 33.0 14 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
52c2pjkA_



not modelled 31.3 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:178aa long hypothetical molybdenum cofactor
PDBTitle: structure of hypothetical molybdenum cofactor biosynthesis2 protein b from sulfolobus tokodaii
53c3hlyA_



not modelled 30.8 9 PDB header:flavoprotein
Chain: A: PDB Molecule:flavodoxin-like domain;
PDBTitle: crystal structure of the flavodoxin-like domain from2 synechococcus sp q5mzp6_synp6 protein. northeast structural3 genomics consortium target snr135d.
54d2a5la1



not modelled 30.5 16 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:WrbA-like
55d1vmea1



not modelled 28.8 11 Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
56c3a32A_



not modelled 28.3 15 PDB header:ligase
Chain: A: PDB Molecule:probable threonyl-trna synthetase 1;
PDBTitle: crystal structure of putative threonyl-trna synthetase2 thrrs-1 from aeropyrum pernix
57d2g2ca1



not modelled 28.0 9 Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MogA-like
58c2pmfA_



not modelled 27.4 18 PDB header:ligase
Chain: A: PDB Molecule:glycyl-trna synthetase;
PDBTitle: the crystal structure of a human glycyl-trna synthetase mutant
59c1nyqA_



not modelled 27.4 11 PDB header:ligase
Chain: A: PDB Molecule:threonyl-trna synthetase 1;
PDBTitle: structure of staphylococcus aureus threonyl-trna synthetase2 complexed with an analogue of threonyl adenylate
60d1a9xa3



not modelled 27.0 25 Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
61d2gx8a1



not modelled 26.4 21 Fold:NIF3 (NGG1p interacting factor 3)-like
Superfamily:NIF3 (NGG1p interacting factor 3)-like
Family:NIF3 (NGG1p interacting factor 3)-like
62d1kmma1



not modelled 26.4 18 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
63c1qe0B_



not modelled 26.3 22 PDB header:ligase
Chain: B: PDB Molecule:histidyl-trna synthetase;
PDBTitle: crystal structure of apo s. aureus histidyl-trna synthetase
64d1kjna_



not modelled 26.3 15 Fold:Hypothetical protein MTH777 (MT0777)
Superfamily:Hypothetical protein MTH777 (MT0777)
Family:Hypothetical protein MTH777 (MT0777)
65d1h4vb1



not modelled 25.9 21 Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
66c1nj8C_



not modelled 25.7 16 PDB header:ligase
Chain: C: PDB Molecule:proline-trna synthetase;
PDBTitle: crystal structure of prolyl-trna synthetase from2 methanocaldococcus janaschii
67d1vkha_



not modelled 25.6 12 Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Putative serine hydrolase Ydr428c
68c2g4rB_



not modelled 25.4 16 PDB header:biosynthetic protein
Chain: B: PDB Molecule:molybdopterin biosynthesis mog protein;
PDBTitle: anomalous substructure of moga
69d7reqa2



not modelled 24.9 16 Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
70c2i2xD_



not modelled 24.6 15 PDB header:transferase
Chain: D: PDB Molecule:methyltransferase 1;
PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri
71d1mkza_



not modelled 24.4 7 Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MogA-like
72c3fniA_



not modelled 24.3 9 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative diflavin flavoprotein a 3;
PDBTitle: crystal structure of a diflavin flavoprotein a3 (all3895) from nostoc2 sp., northeast structural genomics consortium target nsr431a
73d1xi8a3



not modelled 24.2 11 Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MoeA central domain-like
74d1xhfa1



not modelled 24.1 19 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
75d2f7wa1



not modelled 24.0 9 Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MogA-like
76d1p5dx2



not modelled 23.7 21 Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
77d1kfia2



not modelled 23.3 29 Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
78d2fywa1



not modelled 23.0 29 Fold:NIF3 (NGG1p interacting factor 3)-like
Superfamily:NIF3 (NGG1p interacting factor 3)-like
Family:NIF3 (NGG1p interacting factor 3)-like
79c2jlaD_



not modelled 22.9 16 PDB header:transferase
Chain: D: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene
PDBTitle: crystal structure of e.coli mend, 2-succinyl-5-enolpyruvyl-2 6-hydroxy-3-cyclohexadiene-1-carboxylate synthase - semet3 protein
80c3c3mA_



not modelled 22.6 17 PDB header:signaling protein
Chain: A: PDB Molecule:response regulator receiver protein;
PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1
81c3maxB_



not modelled 22.5 23 PDB header:hydrolase
Chain: B: PDB Molecule:histone deacetylase 2;
PDBTitle: crystal structure of human hdac2 complexed with an n-(2-aminophenyl)2 benzamide
82d1qnaa1



not modelled 21.6 19 Fold:TBP-like
Superfamily:TATA-box binding protein-like
Family:TATA-box binding protein (TBP), C-terminal domain
83d1b74a1



not modelled 21.6 27 Fold:ATC-like
Superfamily:Aspartate/glutamate racemase
Family:Aspartate/glutamate racemase
84d1iowa1



not modelled 21.3 35 Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
85d2pl1a1



not modelled 21.2 10 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
86d1xrsb1



not modelled 20.9 24 Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
87c2vavL_



not modelled 20.5 13 PDB header:transferase
Chain: L: PDB Molecule:acetyl-coa--deacetylcephalosporin c
PDBTitle: crystal structure of deacetylcephalosporin c2 acetyltransferase (dac-soak)
88c2nydB_



not modelled 20.4 12 PDB header:unknown function
Chain: B: PDB Molecule:upf0135 protein sa1388;
PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388
89d1y5ea1



not modelled 20.0 11 Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MogA-like
90d1uz5a3



not modelled 19.9 14 Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MoeA central domain-like
91d1qwga_



not modelled 19.4 26 Fold:TIM beta/alpha-barrel
Superfamily:(2r)-phospho-3-sulfolactate synthase ComA
Family:(2r)-phospho-3-sulfolactate synthase ComA
92d1o2da_



not modelled 19.2 13 Fold:Dehydroquinate synthase-like
Superfamily:Dehydroquinate synthase-like
Family:Iron-containing alcohol dehydrogenase
93c1e5dA_



not modelled 19.1 19 PDB header:oxidoreductase
Chain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase;
PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas
94c1cg2D_



not modelled 19.1 18 PDB header:metallocarboxypeptidase
Chain: D: PDB Molecule:carboxypeptidase g2;
PDBTitle: carboxypeptidase g2
95d2grea2



not modelled 18.6 9 Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
96c3f6sI_



not modelled 17.6 17 PDB header:electron transport
Chain: I: PDB Molecule:flavodoxin;
PDBTitle: desulfovibrio desulfuricans (atcc 29577) oxidized flavodoxin2 alternate conformers
97c3k5pA_



not modelled 17.6 21 PDB header:oxidoreductase
Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase;
PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis
98d1cg2a1



not modelled 17.4 18 Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
99d1fmta2



not modelled 17.3 13 Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase