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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3maxB_

Fold library idPDB HeaderMoleculeTitle
c3maxB_PDB header: hydrolaseChain: B: PDB Molecule: histone deacetylase 2;PDBTitle: crystal structure of human hdac2 complexed with an n-(2-aminophenyl)2 benzamide


Added to library: Sun Aug 29 01:08:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSI
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Known secondary structure (DSSP)


TTGGG



TT
S

TTTGGGSS





TTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence RPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG
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Known secondary structure (DSSP)
GGGTTTTT
SSSS


TTTTS
STT


TT
BTTB
BT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKG
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Known secondary structure (DSSP) TB
S
TT
S

SSS

TTT
SS
SS
TT



TT



GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence KYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVK
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Known secondary structure (DSSP) TT

TT
B

S

GGGBTT
SS


BB
 .........290.........300.........310.........320.........330.........340.........350
Sequence TFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
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Known secondary structure (DSSP) TT







STT



SB



TTGGGGTTT
BSS



S





 .........360....
Sequence EKIKQRLFENLRML
Predicted secondary structure

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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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