Fold library entry viewer: c1nj8C_

Added to library: Tue Mar 16 13:20:44 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	E	F	S	E	W	Y	S	D	I	L	E	K	A	E	I	Y	D	V	R	Y	P	I	K	G	C	G	V	Y	L	P	Y	G	F	K	I	R	R	Y	T	F	E	I	I	R	N	L	L	D	E	S	G	H	D	E	A	L	F	P	M	L	I	P	E	D	L	L	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	S	S		B			S	T	T	S	S			B																							T	T								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	A	E	H	I	K	G	F	E	D	E	V	Y	W	V	T	H	G	G	K	T	Q	L	D	V	K	L	A	L	R	P	T	S	E	T	P	I	Y	Y	M	M	K	L	W	V	K	V	H	T	D	L	P	I	K	I	Y	Q	I	V	N	T	F	R	Y	E	T	K	H	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	G	G	G	G	G	G							S	S	S	S										S	S	S										T	T			B	T	T	S																	S			B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	L	I	R	L	R	E	I	M	T	F	K	E	A	H	T	A	H	S	T	K	E	E	A	E	N	Q	V	K	E	A	I	S	I	Y	K	K	F	F	D	T	L	G	I	P	Y	L	I	S	K	R	P	E	W	D	K	F	P	G	A	E	Y	T	M	A	F	D	T	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	B		S	S		S										S	S																							T										T	T	S			T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	D	G	R	T	M	Q	I	A	T	V	H	N	L	G	Q	N	F	S	K	T	F	E	I	I	F	E	T	P	T	G	D	K	D	Y	A	Y	Q	T	C	Y	G	I	S	D	R	V	I	A	S	I	I	A	I	H	G	D	E	K	G	L	I	L	P	P	I	V	A	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S													T						T	T						T	T	S	S													T												B	T	T	B					T	T	S		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	V	V	I	V	P	L	I	F	K	G	K	E	D	I	V	M	E	K	A	K	E	I	Y	E	K	L	K	G	K	F	R	V	H	I	D	D	R	D	I	R	P	G	R	K	F	N	D	W	E	I	K	G	V	P	L	R	I	E	V	G	P	K	D	I	E	N	K	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									S	S																		T	T	S							S		S												T	T		S												T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	L	F	R	R	D	T	M	E	K	F	Q	V	D	E	T	Q	L	M	E	V	V	E	K	T	L	N	N	I	M	E	N	I	K	N	R	A	W	E	K	F	E	N	F	I	T	I	L	E	D	I	N	P	D	E	I	K	N	I	L	S	E	K	R	G	V	I	L	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T								T	T	S																																S	S										T	T	T	T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Sequence	F	K	E	E	I	Y	N	E	E	L	E	E	K	V	E	A	T	I	L	G	E	T	E	Y	K	G	N	K	Y	I	A	I	A	K	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G		S								S	S									S	S	S								B

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PDB structure

FASTA sequence

Hidden Markov model

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