Emaill.a.kelley@imperial.ac.uk
DescriptionP39336
DateThu Jan 5 11:59:27 GMT 2012
Unique Job IDf4d7d81ed7f3e669

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c2qzaA_



95.3 27 PDB header:ligase
Chain: A: PDB Molecule:secreted effector protein;
PDBTitle: crystal structure of salmonella effector protein sopa
2c3nb2B_



94.6 31 PDB header:ligase
Chain: B: PDB Molecule:secreted effector protein;
PDBTitle: crystal structure of e. coli o157:h7 effector protein nlel
3d1qcsa2



24.9 21 Fold:Cdc48 domain 2-like
Superfamily:Cdc48 domain 2-like
Family:Cdc48 domain 2-like
4d1vmja_



19.3 24 Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
5c1ve0A_



18.3 29 PDB header:metal binding protein
Chain: A: PDB Molecule:hypothetical protein (st2072);
PDBTitle: crystal structure of uncharacterized protein st2072 from sulfolobus2 tokodaii
6d1vpha_



18.0 24 Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
7c2w8dB_



17.4 17 PDB header:transferase
Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2;
PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis
8c3ik5A_



16.9 33 PDB header:viral protein/signaling protein
Chain: A: PDB Molecule:protein nef;
PDBTitle: sivmac239 nef in complex with tcr zeta itam 1 polypeptide2 (a63-r80)
9d1s4ka_



16.6 24 Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:YdiL-like
10c2p6cB_



15.9 28 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:aq_2013 protein;
PDBTitle: crystal structure of hypothetical protein aq_2013 from aquifex2 aeolicus vf5.
11d2py5a1



14.9 33 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:DnaQ-like 3'-5' exonuclease
12c2jynA_



14.2 36 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0368 protein ypl225w;
PDBTitle: a novel solution nmr structure of protein yst0336 from2 saccharomyces cerevisiae. northeast structural genomics3 consortium target yt51/ontario centre for structural4 proteomics target yst0336
13c2xi1A_



14.2 39 PDB header:viral protein
Chain: A: PDB Molecule:nef;
PDBTitle: crystal structure of the hiv-1 nef sequenced from a patient's sample
14d1efnb_



13.4 33 Fold:Regulatory factor Nef
Superfamily:Regulatory factor Nef
Family:Regulatory factor Nef
15c3rbbA_



12.4 39 PDB header:viral protein, protein binding
Chain: A: PDB Molecule:protein nef;
PDBTitle: hiv-1 nef protein in complex with engineered hck sh3 domain
16d2nefa_



12.1 33 Fold:Regulatory factor Nef
Superfamily:Regulatory factor Nef
Family:Regulatory factor Nef
17c3ebcA_



11.9 62 PDB header:hydrolase/dna
Chain: A: PDB Molecule:type-2 restriction enzyme hincii;
PDBTitle: structure of n141a hincii with cognate dna
18d1bf4a_



11.8 42 Fold:SH3-like barrel
Superfamily:Chromo domain-like
Family:"Histone-like" proteins from archaea
19c1p82A_



11.6 62 PDB header:chaperone
Chain: A: PDB Molecule:10 kda chaperonin;
PDBTitle: nmr structure of 1-25 fragment of mycobacterium2 tuberculosis cpn10
20d2pgca1



11.5 56 Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Marine metagenome family DABB3
21d1tx3a1



not modelled 11.3 62 Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Restriction endonuclease HincII
22d1vj0a1



not modelled 10.9 20 Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
23c2xrhA_



not modelled 10.8 32 PDB header:unknown function
Chain: A: PDB Molecule:protein hp0721;
PDBTitle: crystal structure of the truncated form of hp0721
24c2elpA_



not modelled 9.0 55 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 13th c2h2 zinc finger of human2 zinc finger protein 406
25d1alqa_



not modelled 8.9 22 Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
26d1ug7a_



not modelled 8.6 20 Fold:Four-helical up-and-down bundle
Superfamily:Domain from hypothetical 2610208m17rik protein
Family:Domain from hypothetical 2610208m17rik protein
27c2qyxB_



not modelled 8.3 31 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein mj0159;
PDBTitle: crystal structure of uncharacterized protein mj0159 from2 methanocaldococcus jannaschii
28c2jvfA_



not modelled 8.1 32 PDB header:de novo protein
Chain: A: PDB Molecule:de novo protein m7;
PDBTitle: solution structure of m7, a computationally-designed2 artificial protein
29c1qysA_



not modelled 7.9 29 PDB header:de novo protein
Chain: A: PDB Molecule:top7;
PDBTitle: crystal structure of top7: a computationally designed2 protein with a novel fold
30c2ejsA_



not modelled 7.9 17 PDB header:ligase
Chain: A: PDB Molecule:autocrine motility factor receptor, isoform 2;
PDBTitle: solution structure of ruh-076, a human cue domain
31d1y14a_



not modelled 7.8 12 Fold:SAM domain-like
Superfamily:HRDC-like
Family:RNA polymerase II subunit RBP4 (RpoF)
32c2r8rB_



not modelled 7.7 26 PDB header:transferase
Chain: B: PDB Molecule:sensor protein;
PDBTitle: crystal structure of the n-terminal region (19..243) of sensor protein2 kdpd from pseudomonas syringae pv. tomato str. dc3000
33c3lgeG_



not modelled 7.3 47 PDB header:lyase/protein binding
Chain: G: PDB Molecule:sorting nexin-9;
PDBTitle: crystal structure of rabbit muscle aldolase-snx9 lc4 complex
34c3lgeF_



not modelled 7.3 47 PDB header:lyase/protein binding
Chain: F: PDB Molecule:sorting nexin-9;
PDBTitle: crystal structure of rabbit muscle aldolase-snx9 lc4 complex
35c3h0gP_



not modelled 6.9 21 PDB header:transcription
Chain: P: PDB Molecule:dna-directed rna polymerase ii subunit rpb4;
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
36c3l76B_



not modelled 6.7 42 PDB header:transferase
Chain: B: PDB Molecule:aspartokinase;
PDBTitle: crystal structure of aspartate kinase from synechocystis
37c1qdnA_



not modelled 6.6 21 PDB header:fusion protein
Chain: A: PDB Molecule:protein (n-ethylmaleimide sensitive fusion
PDBTitle: amino terminal domain of the n-ethylmaleimide sensitive2 fusion protein (nsf)
38c2klqA_



not modelled 6.5 29 PDB header:replication
Chain: A: PDB Molecule:dna replication licensing factor mcm6;
PDBTitle: the solution structure of cbd of human mcm6
39d1vmfa_



not modelled 6.1 23 Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
40d2qrdb1



not modelled 6.0 44 Fold:AMPKBI-like
Superfamily:AMPKBI-like
Family:AMPKBI-like
41d1p2fa1



not modelled 5.9 16 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:PhoB-like
42c3fo8D_



not modelled 5.9 43 PDB header:viral protein
Chain: D: PDB Molecule:tail sheath protein gp18;
PDBTitle: crystal structure of the bacteriophage t4 tail sheath2 protein, protease resistant fragment gp18pr
43c2ex3I_



not modelled 5.9 33 PDB header:transferase/replication
Chain: I: PDB Molecule:dna polymerase;
PDBTitle: bacteriophage phi29 dna polymerase bound to terminal protein
44c2wzpR_



not modelled 5.8 28 PDB header:viral protein
Chain: R: PDB Molecule:lactococcal phage p2 orf16;
PDBTitle: structures of lactococcal phage p2 baseplate shed light on2 a novel mechanism of host attachment and activation in3 siphoviridae
45c3gpkA_



not modelled 5.8 12 PDB header:isomerase
Chain: A: PDB Molecule:ppic-type peptidyl-prolyl cis-trans isomerase;
PDBTitle: crystal structure of ppic-type peptidyl-prolyl cis-trans isomerase2 domain at 1.55a resolution.
46c2k0mA_



not modelled 5.7 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the uncharacterized protein from2 rhodospirillum rubrum gene locus rru_a0810. northeast3 structural genomics target rrr43
47d1gado1



not modelled 5.6 58 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
48d1ggaa1



not modelled 5.6 58 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
49d2qlvb2



not modelled 5.5 44 Fold:AMPKBI-like
Superfamily:AMPKBI-like
Family:AMPKBI-like
50d2nn4a1



not modelled 5.4 37 Fold:YqgQ-like
Superfamily:YqgQ-like
Family:YqgQ-like
51c3jszA_



not modelled 5.4 35 PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: legionella pneumophila glucosyltransferase lgt1 n293a with udp-glc
52d2v8qb1



not modelled 5.3 44 Fold:AMPKBI-like
Superfamily:AMPKBI-like
Family:AMPKBI-like
53c2qdjA_



not modelled 5.2 11 PDB header:antitumor protein
Chain: A: PDB Molecule:retinoblastoma-associated protein;
PDBTitle: crystal structure of the retinoblastoma protein n-domain2 provides insight into tumor suppression, ligand3 interaction and holoprotein architecture
54c2cp8A_



not modelled 5.2 31 PDB header:protein binding
Chain: A: PDB Molecule:next to brca1 gene 1 protein;
PDBTitle: solution structure of the rsgi ruh-046, a uba domain from2 human next to brca1 gene 1 protein (kiaa0049 protein)3 r923h variant
55c2cu5C_



not modelled 5.2 27 PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:conserved hypothetical protein tt1486;
PDBTitle: crystal structure of the conserved hypothetical protein tt1486 from2 thermus thermophilus hb8
56c1zk6A_



not modelled 5.1 38 PDB header:isomerase
Chain: A: PDB Molecule:foldase protein prsa;
PDBTitle: nmr solution structure of b. subtilis prsa ppiase