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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2ex3I_

Fold library idPDB HeaderMoleculeTitle
c2ex3I_PDB header: transferase/replicationChain: I: PDB Molecule: dna polymerase;PDBTitle: bacteriophage phi29 dna polymerase bound to terminal protein


Added to library: Tue Mar 16 14:38:53 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RKMYSCAFETTTKVEDCRVWAYGYMNIEDHSEYKIGNSLDEFMAWVLKVQADLYFHNLKFAGAFIINWLE
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Known secondary structure (DSSP)




SSS

SS
TT
S

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RNGFKWSADGLPNTYNTIISRMGQWYMIDICLGYKGKRKIHTVIYDSLKKLPFPVKKIAKDFKLTVLKGD
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Known secondary structure (DSSP) TT

SS

TT
TT

TTS
S
TT



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IDYHKERPVGYKITPEEYAYIKNDIQIIAEALLIQFKQGLDRMTAGSDSLKGFKDIITTKKFKKVFPTLS
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Known secondary structure (DSSP)

SSS


TT



TTT

SSS
S



 .........220.........230.........240.........250.........260.........270.........280
Sequence LGLDKEVRYAYRGGFTWLNDRFKEKEIGEGMVFDVNSLYPAQMYSRLLPYGEPIVFEGKYVWDEDYPLHI
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Known secondary structure (DSSP) GGG





GGGBT


TTS
SS



TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QHIRCEFELKEGYIPTIQIKRSRFYKGNEYLKSSGGEIADLWLSNVDLELMKEHYDLYNVEYISGLKFKA
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Known secondary structure (DSSP)
TT







S
TT

TTS

SB
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TTGLFKDFIDKWTYIKTTSEGAIKQLAKLMLNSLYGKFASNPDVTGKVPYLKENGALGFRLGEEETKDPV
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Known secondary structure (DSSP) S
SS

SS

SB



TTSS



B


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence YTPMGVFITAWARYTTITAAQACYDRIIYCDTDSIHLTGTEIPDVIKDIVDPKKLGYWAHESTFKRAKYL
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Known secondary structure (DSSP)
TTTTTTSSS

TTB
SSSTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence RQKTYIQDIYMKEVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKPKPVQVPGGV
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Known secondary structure (DSSP) TTSSSS

SSS
S
TT

TT

TTT
STT
TT
 .........570
Sequence VLVDDTFTIK
Predicted secondary structure


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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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