Email l.a.kelley@imperial.ac.uk Description P32710 Date Thu Jan 5 11:50:29 GMT 2012 Unique Job ID ea62dd73d23ec419

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3cfuA_ 88.8 10 PDB header:lipoprotein Chain: A: PDB Molecule:uncharacterized lipoprotein yjha; PDBTitle: crystal structure of the yjha protein from bacillus2 subtilis. northeast structural genomics consortium target3 sr562 2 d2affa1 51.8 24 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 3 c3lkxB_ 47.7 23 PDB header:chaperone Chain: B: PDB Molecule:nascent polypeptide-associated complex subunit alpha; PDBTitle: human nac dimerization domain 4 c1r21A_ 45.4 24 PDB header:cell cycle Chain: A: PDB Molecule:antigen ki-67; PDBTitle: solution structure of human ki67 fha domain 5 c2lezA_ 34.5 17 PDB header:signaling protein Chain: A: PDB Molecule:secreted effector protein pipb2; PDBTitle: solution nmr structure of n-terminal domain of salmonella effector2 protein pipb2. northeast structural genomics consortium (nesg) target3 stt318a 6 d1udxa3 31.4 24 Fold:Obg GTP-binding protein C-terminal domain Superfamily:Obg GTP-binding protein C-terminal domain Family:Obg GTP-binding protein C-terminal domain 7 c1agqB_ 27.2 42 PDB header:growth factor Chain: B: PDB Molecule:glial cell-derived neurotrophic factor; PDBTitle: glial cell-derived neurotrophic factor from rat 8 d2ff4a3 26.0 21 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 9 c3gqsB_ 17.3 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:adenylate cyclase-like protein; PDBTitle: crystal structure of the fha domain of ct664 protein from chlamydia2 trachomatis 10 d3b55a1 15.8 27 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:EreA-like 11 c2radB_ 15.4 27 PDB header:biosynthetic protein Chain: B: PDB Molecule:succinoglycan biosynthesis protein; PDBTitle: crystal structure of the succinoglycan biosynthesis2 protein. northeast structural genomics consortium target3 bcr135 12 c2zpmA_ 13.3 12 PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain b 13 d2f69a1 13.2 16 Fold:open-sided beta-meander Superfamily:Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Family:Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 14 d1fftb2 13.1 12 Fold:Transmembrane helix hairpin Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region Family:Cytochrome c oxidase subunit II-like, transmembrane region 15 c3uotB_ 12.9 21 PDB header:cell cycle Chain: B: PDB Molecule:mediator of dna damage checkpoint protein 1; PDBTitle: crystal structure of mdc1 fha domain in complex with a phosphorylated2 peptide from the mdc1 n-terminus 16 c2l9uA_ 12.4 31 PDB header:membrane protein Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: spatial structure of dimeric erbb3 transmembrane domain 17 d1c8na_ 12.2 23 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 18 c1lcyA_ 12.2 16 PDB header:hydrolase Chain: A: PDB Molecule:htra2 serine protease; PDBTitle: crystal structure of the mitochondrial serine protease htra2 19 d1dlpa1 12.2 13 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 20 d1f2nc_ 11.9 54 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 21 c2kklA_ not modelled 11.8 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mb1858; PDBTitle: solution nmr structure of fha domain of mb1858 from2 mycobacterium bovis. northeast structural genomics3 consortium target mbr243c (24-155). 22 d4sbva_ not modelled 11.3 31 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 23 d2o3ga1 not modelled 11.2 18 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 24 d1smvc_ not modelled 11.2 31 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 25 c2bbjB_ not modelled 11.2 8 PDB header:metal transport/membrane protein Chain: B: PDB Molecule:divalent cation transport-related protein; PDBTitle: crystal structure of the cora mg2+ transporter 26 c3poaA_ not modelled 10.7 14 PDB header:peptide binding protein Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: structural and functional analysis of phosphothreonine-dependent fha2 domain interactions 27 c1bhbA_ not modelled 10.6 30 PDB header:photoreceptor Chain: A: PDB Molecule:bacteriorhodopsin; PDBTitle: three-dimensional structure of (1-71) bacterioopsin2 solubilized in methanol-chloroform and sds micelles3 determined by 15n-1h heteronuclear nmr spectroscopy 28 d2gmqa1 not modelled 10.4 15 Fold:PUA domain-like Superfamily:PUA domain-like Family:PrgU-like 29 c2r76A_ not modelled 10.3 9 PDB header:lipoprotein Chain: A: PDB Molecule:rare lipoprotein b; PDBTitle: crystal structure of the rare lipoprotein b (so_1173) from shewanella2 oneidensis, northeast structural genomics consortium target sor91a 30 c3mpbA_ not modelled 10.2 17 PDB header:isomerase Chain: A: PDB Molecule:sugar isomerase; PDBTitle: z5688 from e. coli o157:h7 bound to fructose 31 c3ia8A_ not modelled 10.1 29 PDB header:metal binding protein Chain: A: PDB Molecule:thap domain-containing protein 4; PDBTitle: the structure of the c-terminal heme nitrobindin domain of thap2 domain-containing protein 4 from homo sapiens 32 d1ng0c_ not modelled 10.0 50 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 33 d1smva_ not modelled 9.6 31 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 34 c4a0kB_ not modelled 9.2 75 PDB header:ligase/dna-binding protein/dna Chain: B: PDB Molecule:e3 ubiquitin-protein ligase rbx1; PDBTitle: structure of ddb1-ddb2-cul4a-rbx1 bound to a 12 bp abasic2 site containing dna-duplex 35 d1f2na_ not modelled 9.2 54 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 36 c1f2nA_ not modelled 9.2 54 PDB header:virus Chain: A: PDB Molecule:capsid protein; PDBTitle: rice yellow mottle virus 37 d2p13a1 not modelled 9.2 26 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 38 c1hgvA_ not modelled 9.2 26 PDB header:virus Chain: A: PDB Molecule:ph75 inovirus major coat protein; PDBTitle: filamentous bacteriophage ph75 39 d1hdmb2 not modelled 9.2 83 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 40 c2p0vA_ not modelled 9.1 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein bt3781; PDBTitle: crystal structure of bt3781 protein from bacteroides2 thetaiotaomicron, northeast structural genomics target3 btr58 41 d2p0va1 not modelled 9.1 28 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:CPF0428-like 42 c3lw52_ not modelled 9.1 18 PDB header:photosynthesis Chain: 2: PDB Molecule:type ii chlorophyll a/b binding protein from photosystem i; PDB Fragment:residues 81-246; PDBTitle: improved model of plant photosystem i 43 d2vq0a1 not modelled 9.0 31 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 44 c2dfwA_ not modelled 8.8 27 PDB header:hydrolase Chain: A: PDB Molecule:salt-tolerant glutaminase; PDBTitle: crystal structure of a major fragment of the salt-tolerant2 glutaminase from micrococcus luteus k-3 45 d2nvpa1 not modelled 8.3 39 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:CPF0428-like 46 d1bwua_ not modelled 8.3 25 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 47 c1c8nC_ not modelled 7.9 23 PDB header:virus Chain: C: PDB Molecule:coat protein; PDBTitle: tobacco necrosis virus 48 d1c8nc_ not modelled 7.9 23 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 49 c3rkoN_ not modelled 7.7 20 PDB header:oxidoreductase Chain: N: PDB Molecule:nadh-quinone oxidoreductase subunit n; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution 50 d2qgma1 not modelled 7.7 13 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:EreA-like 51 c2qgmA_ not modelled 7.7 13 PDB header:biosynthetic protein Chain: A: PDB Molecule:succinoglycan biosynthesis protein; PDBTitle: crystal structure of succinoglycan biosynthesis protein at2 the resolution 1.7 a. northeast structural genomics3 consortium target bcr136. 52 d2o1ra1 not modelled 7.7 11 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 53 c3o0rB_ not modelled 7.7 14 PDB header:immune system/oxidoreductase Chain: B: PDB Molecule:nitric oxide reductase subunit b; PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment 54 d1u60a_ not modelled 7.7 29 Fold:beta-lactamase/transpeptidase-like Superfamily:beta-lactamase/transpeptidase-like Family:Glutaminase 55 c2l7eA_ not modelled 7.6 63 PDB header:transcription Chain: A: PDB Molecule:transcription initiation factor tfiid subunit 14; PDBTitle: the structure of a domain from yeast 56 c2yyoA_ not modelled 7.5 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:spry domain-containing protein 3; PDBTitle: crystal sturcture of human spry domain 57 d2bgca2 not modelled 7.4 80 Fold:Double-stranded beta-helix Superfamily:cAMP-binding domain-like Family:Listeriolysin regulatory protein PrfA, N-terminal domain 58 c1ng0A_ not modelled 7.4 50 PDB header:virus Chain: A: PDB Molecule:coat protein; PDBTitle: the three-dimensional structure of cocksfoot mottle virus2 at 2.7a resolution 59 d1ng0a_ not modelled 7.4 50 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Tombusviridae-like VP 60 c3mezA_ not modelled 7.2 10 PDB header:sugar binding protein Chain: A: PDB Molecule:mannose-specific lectin 3 chain 1; PDBTitle: x-ray structural analysis of a mannose specific lectin from dutch2 crocus (crocus vernus) 61 c2kjpA_ not modelled 7.2 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ylbl; PDBTitle: solution structure of protein ylbl (bsu15050) from bacillus2 subtilis, northeast structural genomics consortium target3 sr713a 62 c2ksfA_ not modelled 7.2 13 PDB header:transferase Chain: A: PDB Molecule:sensor protein kdpd; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor kdpd, center for structures of3 membrane proteins (csmp) target 4312c 63 d3deda1 not modelled 7.2 16 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 64 c1yj5C_ not modelled 7.1 30 PDB header:transferase Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme 65 d1rl2a2 not modelled 7.1 10 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 66 c3fm8A_ not modelled 7.1 16 PDB header:transport protein/hydrolase activator Chain: A: PDB Molecule:kinesin-like protein kif13b; PDBTitle: crystal structure of full length centaurin alpha-1 bound with the fha2 domain of kif13b (capri target) 67 d1gh6b2 not modelled 7.1 7 Fold:Cyclin-like Superfamily:Cyclin-like Family:Retinoblastoma tumor suppressor domains 68 c2yvxD_ not modelled 7.1 21 PDB header:transport protein Chain: D: PDB Molecule:mg2+ transporter mgte; PDBTitle: crystal structure of magnesium transporter mgte 69 c2jkdB_ not modelled 7.1 21 PDB header:gene regulation Chain: B: PDB Molecule:pre-mrna leakage protein 1; PDBTitle: structure of the yeast pml1 splicing factor and its2 integration into the res complex 70 d1bwud_ not modelled 7.0 20 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 71 d2plia1 not modelled 7.0 23 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 72 d2brfa1 not modelled 7.0 28 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 73 d1kj1a_ not modelled 7.0 25 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 74 c3m4wH_ not modelled 7.0 26 PDB header:signaling protein/signaling protein Chain: H: PDB Molecule:sigma-e factor negative regulatory protein; PDBTitle: structural basis for the negative regulation of bacterial stress2 response by rseb 75 c2vo9C_ not modelled 6.9 25 PDB header:hydrolase Chain: C: PDB Molecule:l-alanyl-d-glutamate peptidase; PDBTitle: crystal structure of the enzymatically active domain of the2 listeria monocytogenes bacteriophage 500 endolysin ply500 76 c3dedB_ not modelled 6.9 16 PDB header:membrane protein Chain: B: PDB Molecule:probable hemolysin; PDBTitle: c-terminal domain of probable hemolysin from chromobacterium violaceum 77 c3elsA_ not modelled 6.9 23 PDB header:splicing Chain: A: PDB Molecule:pre-mrna leakage protein 1; PDBTitle: crystal structure of yeast pml1p, residues 51-204 78 c1gh6B_ not modelled 6.9 13 PDB header:antitumor protein Chain: B: PDB Molecule:retinoblastoma-associated protein; PDBTitle: retinoblastoma pocket complexed with sv40 large t antigen 79 d1p9ka_ not modelled 6.8 23 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like 80 d2plsa1 not modelled 6.7 16 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 81 d1qcsa1 not modelled 6.7 43 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 82 d2vera1 not modelled 6.7 40 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Dr-family adhesin 83 c3llbA_ not modelled 6.7 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein pa3983 with unknown2 function from pseudomonas aeruginosa pao1 84 c2qcqA_ not modelled 6.6 38 PDB header:signaling protein Chain: A: PDB Molecule:bone morphogenetic protein 3; PDBTitle: crystal structure of bone morphogenetic protein-3 (bmp-3) 85 d1uhta_ not modelled 6.6 24 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 86 c2p28A_ not modelled 6.6 38 PDB header:cell adhesion Chain: A: PDB Molecule:integrin beta-2; PDBTitle: structure of the phe2 and phe3 fragments of the integrin beta2 subunit 87 c1fftG_ not modelled 6.6 12 PDB header:oxidoreductase Chain: G: PDB Molecule:ubiquinol oxidase; PDBTitle: the structure of ubiquinol oxidase from escherichia coli 88 d1h3ga1 not modelled 6.6 10 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 89 c2gyrB_ not modelled 6.6 38 PDB header:hormone/growth factor Chain: B: PDB Molecule:neurotrophic factor artemin, isoform 3; PDBTitle: crystal structure of human artemin 90 c2rf9D_ not modelled 6.5 29 PDB header:transferase Chain: D: PDB Molecule:erbb receptor feedback inhibitor 1; PDBTitle: crystal structure of the complex between the egfr kinase2 domain and a mig6 peptide 91 d2oaia1 not modelled 6.5 23 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 92 c3pv4A_ not modelled 6.5 7 PDB header:hydrolase Chain: A: PDB Molecule:degq; PDBTitle: structure of legionella fallonii degq (delta-pdz2 variant) 93 d1vjja2 not modelled 6.4 15 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 94 c1zkzA_ not modelled 6.4 38 PDB header:hormone/growth factor Chain: A: PDB Molecule:growth/differentiation factor 2; PDBTitle: crystal structure of bmp9 95 c2hczX_ not modelled 6.4 38 PDB header:allergen Chain: X: PDB Molecule:beta-expansin 1a; PDBTitle: crystal structure of expb1 (zea m 1), a beta-expansin and group-12 pollen allergen from maize 96 d2r7ga2 not modelled 6.4 7 Fold:Cyclin-like Superfamily:Cyclin-like Family:Retinoblastoma tumor suppressor domains 97 d1jpca_ not modelled 6.4 15 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 98 c2odkD_ not modelled 6.4 13 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein; PDBTitle: putative prevent-host-death protein from nitrosomonas europaea 99 c3htxA_ not modelled 6.4 17 PDB header:transferase/rna Chain: A: PDB Molecule:hen1; PDBTitle: crystal structure of small rna methyltransferase hen1