Email l.a.kelley@imperial.ac.uk Description P39160 Date Thu Jan 5 11:58:16 GMT 2012 Unique Job ID e586d0cd936b0f91

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1m2wA_ 100.0 38 PDB header:oxidoreductase Chain: A: PDB Molecule:mannitol dehydrogenase; PDBTitle: pseudomonas fluorescens mannitol 2-dehydrogenase ternary complex with2 nad and d-mannitol 2 c3h2zA_ 100.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:mannitol-1-phosphate 5-dehydrogenase; PDBTitle: the crystal structure of mannitol-1-phosphate dehydrogenase from2 shigella flexneri 3 d1lj8a4 100.0 41 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 4 d1lj8a3 100.0 32 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Mannitol 2-dehydrogenase 5 c2ph5A_ 50.5 14 PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 6 c3fggA_ 45.0 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bce2196; PDBTitle: crystal structure of putative ecf-type sigma factor negative effector2 from bacillus cereus 7 c2axqA_ 41.2 10 PDB header:oxidoreductase Chain: A: PDB Molecule:saccharopine dehydrogenase; PDBTitle: apo histidine-tagged saccharopine dehydrogenase (l-glu2 forming) from saccharomyces cerevisiae 8 d1k4ia_ 35.0 16 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 9 c3euwB_ 27.8 16 PDB header:oxidoreductase Chain: B: PDB Molecule:myo-inositol dehydrogenase; PDBTitle: crystal structure of a myo-inositol dehydrogenase from corynebacterium2 glutamicum atcc 13032 10 d1snna_ 27.5 15 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 11 c3egoB_ 25.4 13 PDB header:oxidoreductase Chain: B: PDB Molecule:probable 2-dehydropantoate 2-reductase; PDBTitle: crystal structure of probable 2-dehydropantoate 2-reductase2 pane from bacillus subtilis 12 d2o8ra3 24.5 33 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 13 c3mtjA_ 23.5 11 PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: the crystal structure of a homoserine dehydrogenase from thiobacillus2 denitrificans to 2.15a 14 c1ceuA_ 22.6 44 PDB header:viral protein Chain: A: PDB Molecule:protein (hiv-1 regulatory protein n-terminal PDBTitle: nmr structure of the (1-51) n-terminal domain of the hiv-12 regulatory protein 15 c3mioA_ 22.1 24 PDB header:lyase Chain: A: PDB Molecule:3,4-dihydroxy-2-butanone 4-phosphate synthase; PDBTitle: crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase2 domain from mycobacterium tuberculosis at ph 6.00 16 c2o8rA_ 21.5 36 PDB header:transferase Chain: A: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of polyphosphate kinase from2 porphyromonas gingivalis 17 d1r0ka2 20.2 10 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 18 c3nt5B_ 19.8 19 PDB header:oxidoreductase Chain: B: PDB Molecule:inositol 2-dehydrogenase/d-chiro-inositol 3-dehydrogenase; PDBTitle: crystal structure of myo-inositol dehydrogenase from bacillus subtilis2 with bound cofactor and product inosose 19 c3h8gC_ 19.7 12 PDB header:hydrolase Chain: C: PDB Molecule:cytosol aminopeptidase; PDBTitle: bestatin complex structure of leucine aminopeptidase from pseudomonas2 putida 20 c1e5lA_ 18.2 11 PDB header:oxidoreductase Chain: A: PDB Molecule:saccharopine reductase; PDBTitle: apo saccharopine reductase from magnaporthe grisea 21 d2oc5a1 not modelled 18.0 31 Fold:Ferritin-like Superfamily:Ferritin-like Family:PMT1231-like 22 d1v8fa_ not modelled 17.1 31 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) 23 c3ceaA_ not modelled 17.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:myo-inositol 2-dehydrogenase; PDBTitle: crystal structure of myo-inositol 2-dehydrogenase (np_786804.1) from2 lactobacillus plantarum at 2.40 a resolution 24 c1z9bA_ not modelled 15.6 17 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-2; PDBTitle: solution structure of the c1-subdomain of bacillus2 stearothermophilus translation initiation factor if2 25 c1lanA_ not modelled 15.4 13 PDB header:hydrolase (alpha-aminoacylpeptide) Chain: A: PDB Molecule:leucine aminopeptidase; PDBTitle: leucine aminopeptidase complex with l-leucinal 26 d1gyta2 not modelled 15.1 13 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Leucine aminopeptidase, C-terminal domain 27 d1uj8a1 not modelled 15.1 18 Fold:Another 3-helical bundle Superfamily:IscX-like Family:IscX-like 28 c3docD_ not modelled 14.8 19 PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of trka glyceraldehyde-3-phosphate2 dehydrogenase from brucella melitensis 29 c2c9lZ_ not modelled 14.5 33 PDB header:viral protein Chain: Z: PDB Molecule:bzlf1 trans-activator protein; PDBTitle: structure of the epstein-barr virus zebra protein 30 c3guzB_ not modelled 14.5 17 PDB header:ligase Chain: B: PDB Molecule:pantothenate synthetase; PDBTitle: structural and substrate-binding studies of pantothenate2 synthenate (ps)provide insights into homotropic inhibition3 by pantoate in ps's 31 c1dvpA_ not modelled 14.0 13 PDB header:transferase Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction 32 c3ketA_ not modelled 13.9 25 PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator 33 c1gytG_ not modelled 13.4 13 PDB header:hydrolase Chain: G: PDB Molecule:cytosol aminopeptidase; PDBTitle: e. coli aminopeptidase a (pepa) 34 c3kzwD_ not modelled 13.1 15 PDB header:hydrolase Chain: D: PDB Molecule:cytosol aminopeptidase; PDBTitle: crystal structure of cytosol aminopeptidase from staphylococcus aureus2 col 35 d2py6a1 not modelled 13.0 25 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:FkbM-like 36 c3omdB_ not modelled 12.1 14 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of unknown function protein from leptospirillum2 rubarum 37 d2v0fa1 not modelled 11.9 46 Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like 38 d1k8kg_ not modelled 11.8 15 Fold:alpha-alpha superhelix Superfamily:Arp2/3 complex 16 kDa subunit ARPC5 Family:Arp2/3 complex 16 kDa subunit ARPC5 39 d1qusa_ not modelled 11.6 14 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Bacterial muramidase, catalytic domain 40 c3n8hA_ not modelled 11.4 27 PDB header:ligase Chain: A: PDB Molecule:pantothenate synthetase; PDBTitle: crystal structure of pantoate-beta-alanine ligase from francisella2 tularensis 41 d2cu2a2 not modelled 11.2 12 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:mannose-1-phosphate guanylyl transferase 42 d1lama1 not modelled 11.2 14 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Leucine aminopeptidase, C-terminal domain 43 c3q2kB_ not modelled 10.9 13 PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca 44 d1dvpa1 not modelled 10.7 14 Fold:alpha-alpha superhelix Superfamily:ENTH/VHS domain Family:VHS domain 45 d2dt5a2 not modelled 10.7 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Transcriptional repressor Rex, C-terminal domain 46 d1xdpa3 not modelled 10.6 50 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 47 d1gzsb_ not modelled 10.3 18 Fold:SopE-like GEF domain Superfamily:SopE-like GEF domain Family:SopE-like GEF domain 48 d1q7ra_ not modelled 10.2 24 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 49 c1fi0A_ not modelled 9.8 44 PDB header:viral protein Chain: A: PDB Molecule:vpr protein; PDBTitle: solution structure of hiv-1 vpr (13-33) peptide in micells 50 c3bjrA_ not modelled 9.8 8 PDB header:hydrolase Chain: A: PDB Molecule:putative carboxylesterase; PDBTitle: crystal structure of a putative carboxylesterase (lp_1002) from2 lactobacillus plantarum wcfs1 at 2.09 a resolution 51 d1au7a2 not modelled 9.7 19 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:POU-specific domain 52 c2ejcA_ not modelled 9.4 19 PDB header:ligase Chain: A: PDB Molecule:pantoate--beta-alanine ligase; PDBTitle: crystal structure of pantoate--beta-alanine ligase (panc)2 from thermotoga maritima 53 c3innB_ not modelled 9.3 19 PDB header:ligase Chain: B: PDB Molecule:pantothenate synthetase; PDBTitle: crystal structure of pantoate-beta-alanine-ligase in complex2 with atp at low occupancy at 2.1 a resolution 54 d1o7fa1 not modelled 9.3 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DEP domain 55 c2cu2A_ not modelled 9.1 11 PDB header:transferase Chain: A: PDB Molecule:putative mannose-1-phosphate guanylyl transferase; PDBTitle: crystal structure of mannose-1-phosphate geranyltransferase from2 thermus thermophilus hb8 56 c2hc9A_ not modelled 9.1 13 PDB header:hydrolase Chain: A: PDB Molecule:leucine aminopeptidase 1; PDBTitle: structure of caenorhabditis elegans leucine aminopeptidase-zinc2 complex (lap1) 57 c1x5bA_ not modelled 8.9 12 PDB header:protein binding Chain: A: PDB Molecule:signal transducing adaptor molecule 2; PDBTitle: the solution structure of the vhs domain of human signal2 transducing adaptor molecule 2 58 c3moiA_ not modelled 8.7 21 PDB header:oxidoreductase Chain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of the putative dehydrogenase from bordetella2 bronchiseptica rb50 59 d2hiqa1 not modelled 8.5 16 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Hypothetical protein YdhR 60 c2qytA_ not modelled 8.5 19 PDB header:oxidoreductase Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from porphyromonas2 gingivalis w83 61 c3t38B_ not modelled 8.4 7 PDB header:oxidoreductase Chain: B: PDB Molecule:arsenate reductase; PDBTitle: corynebacterium glutamicum thioredoxin-dependent arsenate reductase2 cg_arsc1' 62 c3dapB_ not modelled 8.2 17 PDB header:oxidoreductase Chain: B: PDB Molecule:diaminopimelic acid dehydrogenase; PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline 63 d1gtra2 not modelled 8.0 11 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 64 d1f06a1 not modelled 7.9 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 65 c1lw7A_ not modelled 7.6 13 PDB header:transferase Chain: A: PDB Molecule:transcriptional regulator nadr; PDBTitle: nadr protein from haemophilus influenzae 66 c3ag5A_ not modelled 7.6 31 PDB header:ligase Chain: A: PDB Molecule:pantothenate synthetase; PDBTitle: crystal structure of pantothenate synthetase from staphylococcus2 aureus 67 c2hz7A_ not modelled 7.5 15 PDB header:ligase Chain: A: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of the glutaminyl-trna synthetase from2 deinococcus radiodurans 68 c2k2iB_ not modelled 7.4 55 PDB header:cell cycle Chain: B: PDB Molecule:sfi1 peptide; PDBTitle: nmr solution structure of the c-terminal domain (t94-y172)2 of the human centrin 2 in complex with a repeat sequence of3 human sfi1 (r641-t660) 69 d1hcia1 not modelled 7.3 21 Fold:Spectrin repeat-like Superfamily:Spectrin repeat Family:Spectrin repeat 70 d1zh8a1 not modelled 7.3 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 71 c1iq5B_ not modelled 7.3 67 PDB header:metal binding protein/protein binding Chain: B: PDB Molecule:ca2+/calmodulin dependent kinase kinase; PDBTitle: calmodulin/nematode ca2+/calmodulin dependent kinase kinase2 fragment 72 d1f0xa1 not modelled 7.2 50 Fold:Ferredoxin-like Superfamily:FAD-linked oxidases, C-terminal domain Family:D-lactate dehydrogenase 73 c3b20R_ not modelled 7.1 15 PDB header:oxidoreductase Chain: R: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase (nadp+); PDBTitle: crystal structure analysis of dehydrogenase complexed with nad 74 c1u2jC_ not modelled 6.9 29 PDB header:oxidoreductase Chain: C: PDB Molecule:peroxidase/catalase hpi; PDBTitle: crystal structure of the c-terminal domain from the2 catalase-peroxidase katg of escherichia coli (p21 21 21) 75 c3jruB_ not modelled 6.7 13 PDB header:hydrolase Chain: B: PDB Molecule:probable cytosol aminopeptidase; PDBTitle: crystal structure of leucyl aminopeptidase (pepa) from xoo0834,2 xanthomonas oryzae pv. oryzae kacc10331 76 d1u2ka_ not modelled 6.7 29 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 77 c3r24A_ not modelled 6.6 37 PDB header:transferase, viral protein Chain: A: PDB Molecule:2'-o-methyl transferase; PDBTitle: crystal structure of nsp10/nsp16 complex of sars coronavirus" if2 possible 78 c3dwlG_ not modelled 6.6 10 PDB header:structural protein Chain: G: PDB Molecule:actin-related protein 2/3 complex subunit 5; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit 79 c2rkhA_ not modelled 6.6 24 PDB header:transcription Chain: A: PDB Molecule:putative apha-like transcription factor; PDBTitle: crystal structure of a putative apha-like transcription factor2 (zp_00208345.1) from magnetospirillum magnetotacticum ms-1 at 2.00 a3 resolution 80 c3euhB_ not modelled 6.6 15 PDB header:cell cycle Chain: B: PDB Molecule:chromosome partition protein mukf; PDBTitle: crystal structure of the muke-mukf complex 81 c3tsuA_ not modelled 6.5 29 PDB header:transferase Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate 82 d1m9fd_ not modelled 6.5 25 Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain 83 c3hn2A_ not modelled 6.5 13 PDB header:oxidoreductase Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from geobacter2 metallireducens gs-15 84 c3ghyA_ not modelled 6.4 13 PDB header:oxidoreductase Chain: A: PDB Molecule:ketopantoate reductase protein; PDBTitle: crystal structure of a putative ketopantoate reductase from ralstonia2 solanacearum molk2 85 d1ebfa1 not modelled 6.4 9 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 86 d2a84a1 not modelled 6.3 27 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) 87 c3ij3A_ not modelled 6.3 18 PDB header:hydrolase Chain: A: PDB Molecule:cytosol aminopeptidase; PDBTitle: 1.8 angstrom resolution crystal structure of cytosol aminopeptidase2 from coxiella burnetii 88 c1s6cB_ not modelled 6.2 38 PDB header:transport protein Chain: B: PDB Molecule:potassium voltage-gated channel subfamily d member 2; PDBTitle: crystal structure of the complex between kchip1 and kv4.2 n1-30 89 c2gzdC_ not modelled 6.2 33 PDB header:protein transport Chain: C: PDB Molecule:rab11 family-interacting protein 2; PDBTitle: crystal structure of rab11 in complex with rab11-fip2 90 d1ekxa2 not modelled 6.2 16 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 91 d2pxrc1 not modelled 6.2 25 Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain 92 d1mbsa_ not modelled 6.1 11 Fold:Globin-like Superfamily:Globin-like Family:Globins 93 d1mrza2 not modelled 6.0 28 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Adenylyltransferase 94 c2h8oA_ not modelled 6.0 19 PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: the 1.6a crystal structure of the geranyltransferase from2 agrobacterium tumefaciens 95 c2q4eB_ not modelled 6.0 11 PDB header:oxidoreductase Chain: B: PDB Molecule:probable oxidoreductase at4g09670; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at4g09670 96 c1r0lD_ not modelled 6.0 18 PDB header:oxidoreductase Chain: D: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from2 zymomonas mobilis in complex with nadph 97 c2x5sB_ not modelled 6.0 8 PDB header:transferase Chain: B: PDB Molecule:mannose-1-phosphate guanylyltransferase; PDBTitle: crystal structure of t. maritima gdp-mannose2 pyrophosphorylase in apo state. 98 d1ccda_ not modelled 6.0 25 Fold:Uteroglobin-like Superfamily:Uteroglobin-like Family:Uteroglobin-like 99 d1r6ea_ not modelled 5.9 21 Fold:SopE-like GEF domain Superfamily:SopE-like GEF domain Family:SopE-like GEF domain