PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2rkhA_

Fold library id	PDB Header	Molecule	Title
c2rkhA_	PDB header: transcription	Chain: A: PDB Molecule: putative apha-like transcription factor;	PDBTitle: crystal structure of a putative apha-like transcription2 factor (zp_00208345.1) from magnetospirillum3 magnetotacticum ms-1 at 2.00 a resolution

Links to external resources
Added to library: Tue Mar 16 12:17:56 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T L T P K E A V R L C A L G T I A S Q P X R Y S E L A G S V R H F T S R I X G P S L E L X G I S I E L L R Y E G L V E A V D A X L A I S A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
G G G T T
T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G R R E L H S L L T A R L R P G S D L S K L V V A L K X R F L G L X E A E E R A H Q I D L L I E G V D S E L A R L A D L R G G E G G S A L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
T T G G G S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . .

Sequence A W L D H D X A L L E S R L A W L E D F R A R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	L	T	P	K	E	A	V	R	L	C	A	L	G	T	I	A	S	Q	P	X	R	Y	S	E	L	A	G	S	V	R	H	F	T	S	R	I	X	G	P	S	L	E	L	X	G	I	S	I	E	L	L	R	Y	E	G	L	V	E	A	V	D	A	X	L	A	I	S	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S																				S			G	G	G	T	T			T						T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	R	R	E	L	H	S	L	L	T	A	R	L	R	P	G	S	D	L	S	K	L	V	V	A	L	K	X	R	F	L	G	L	X	E	A	E	E	R	A	H	Q	I	D	L	L	I	E	G	V	D	S	E	L	A	R	L	A	D	L	R	G	G	E	G	G	S	A	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S					S	S	S		T											T	G	G	G	S																																	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Sequence	A	W	L	D	H	D	X	A	L	L	E	S	R	L	A	W	L	E	D	F	R	A	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)