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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2axqA_

Fold library idPDB HeaderMoleculeTitle
c2axqA_PDB header: oxidoreductaseChain: A: PDB Molecule: saccharopine dehydrogenase;PDBTitle: apo histidine-tagged saccharopine dehydrogenase (l-glu2 forming) from saccharomyces cerevisiae


Added to library: Tue Mar 16 12:43:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVV
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Known secondary structure (DSSP)


STTTSTTSSGGGT


TT
TSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEVH
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Known secondary structure (DSSP)
S
GGGT

S


T

S
BBTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence RAGGKLKSFLSYCGGLPAPEDSDNPLGYKFSWSSRGVLLALRNSAKYWKDGKIETVSSEDLMATAKPYFI
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Known secondary structure (DSSP) TT

GGG

STTS

BSS

GGGS
TT
TTT


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YPGYAFVCYPNRDSTLFKDLYHIPEAETVIRGTLRYQGFPEFVKALVDMGMLKDDANEIFSKPIAWNEAL
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Known secondary structure (DSSP) STT


SB
TTT
TT
STTTTTT

SB
GGGSS

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence KQYLGAKSTSKEDLIASIDSKATWKDDEDRERILSGFAWLGLFSDAKITPRGNALDTLCARLEELMQYED
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Known secondary structure (DSSP) T
SSSSTT


S
TTTTSS
B



SBSB

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence NERDMVVLQHKFGIEWADGTTETRTSTLVDYGKVGGYSSMAATVGYPVAIATKFVLDGTIKGPGLLAPYS
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Known secondary structure (DSSP) T


TTS


TTS

TTSS

S
S
S
 .........430.........440.....
Sequence PEINDPIMKELKDKYGIYLKEKTVA
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Known secondary structure (DSSP)






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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