| 1 | c1ma7A_ |
|
 |
100.0 |
13 |
PDB header:hydrolase, ligase/dna
Chain: A: PDB Molecule:cre recombinase;
PDBTitle: crystal structure of cre site-specific recombinase2 complexed with a mutant dna substrate, loxp-a8/t27
|
| 2 | c1z1bA_ |
|
 |
100.0 |
16 |
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:integrase;
PDBTitle: crystal structure of a lambda integrase dimer bound to a2 coc' core site
|
| 3 | c1crxA_ |
|
 |
100.0 |
13 |
PDB header:replication/dna
Chain: A: PDB Molecule:cre recombinase;
PDBTitle: cre recombinase/dna complex reaction intermediate i
|
| 4 | c2a3vA_ |
|
 |
100.0 |
15 |
PDB header:recombination
Chain: A: PDB Molecule:site-specific recombinase inti4;
PDBTitle: structural basis for broad dna-specificity in integron2 recombination
|
| 5 | d1p7da_ |
|
 |
100.0 |
16 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 6 | c3nkhB_ |
|
 |
100.0 |
19 |
PDB header:recombination
Chain: B: PDB Molecule:integrase;
PDBTitle: crystal structure of integrase from mrsa strain staphylococcus aureus
|
| 7 | c1a0pA_ |
|
 |
100.0 |
19 |
PDB header:dna recombination
Chain: A: PDB Molecule:site-specific recombinase xerd;
PDBTitle: site-specific recombinase, xerd
|
| 8 | d1aiha_ |
|
 |
99.8 |
19 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 9 | d1f44a2 |
|
 |
99.8 |
15 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 10 | d1a0pa2 |
|
 |
99.7 |
20 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 11 | d1ae9a_ |
|
 |
99.7 |
18 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 12 | d5crxb2 |
|
 |
99.6 |
13 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 13 | c2kd1A_ |
|
 |
99.6 |
11 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dna integration/recombination/invertion protein;
PDBTitle: solution nmr structure of the integrase-like domain from2 bacillus cereus ordered locus bc_1272. northeast3 structural genomics consortium target bcr268f
|
| 14 | c2kj8A_ |
|
 |
99.5 |
12 |
PDB header:dna binding protein
Chain: A: PDB Molecule:putative prophage cps-53 integrase;
PDBTitle: nmr structure of fragment 87-196 from the putative phage2 integrase ints of e. coli: northeast structural genomics3 consortium target er652a, psi-2
|
| 15 | c2kkpA_ |
|
 |
99.5 |
12 |
PDB header:dna binding protein
Chain: A: PDB Molecule:phage integrase;
PDBTitle: solution nmr structure of the phage integrase sam-like2 domain from moth 1796 from moorella thermoacetica.3 northeast structural genomics consortium target mtr39k4 (residues 64-171).
|
| 16 | c2kiwA_ |
|
 |
99.5 |
19 |
PDB header:dna binding protein
Chain: A: PDB Molecule:int protein;
PDBTitle: solution nmr structure of the domain n-terminal to the2 integrase domain of sh1003 from staphylococcus3 haemolyticus. northeast structural genomics consortium4 target shr105f (64-166).
|
| 17 | c2khqA_ |
|
 |
99.5 |
17 |
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: solution nmr structure of a phage integrase ssp19472 fragment 59-159 from staphylococcus saprophyticus,3 northeast structural genomics consortium target syr103b
|
| 18 | c3lysC_ |
|
 |
99.4 |
14 |
PDB header:recombination
Chain: C: PDB Molecule:prophage pi2 protein 01, integrase;
PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f
|
| 19 | c2kobA_ |
|
 |
99.4 |
24 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of clolep_01837 (fragment 61-160)2 from clostridium leptum. northeast structural genomics3 consortium target qlr8a
|
| 20 | c3nrwA_ |
|
 |
99.4 |
17 |
PDB header:recombination
Chain: A: PDB Molecule:phage integrase/site-specific recombinase;
PDBTitle: crystal structure of the n-terminal domain of phage integrase/site-2 specific recombinase (tnp) from haloarcula marismortui, northeast3 structural genomics consortium target hmr208a
|
| 21 | c2kj9A_ |
|
not modelled |
99.4 |
12 |
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: nmr structure of intb phage-integrase-like protein fragment2 90-199 from erwinia carotova subsp. atroseptica: northeast3 structural genomics consortium target ewr217e
|
| 22 | c2oxoA_ |
|
not modelled |
99.4 |
15 |
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: crystallization and structure determination of the core-2 binding domain of bacteriophage lambda integrase
|
| 23 | c2keyA_ |
|
not modelled |
99.4 |
8 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative phage integrase;
PDBTitle: solution nmr structure of a domain from a putative phage integrase2 protein bf2284 from bacteroides fragilis, northeast structural3 genomics consortium target bfr257c
|
| 24 | c2kkvA_ |
|
not modelled |
99.4 |
13 |
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: solution nmr structure of an integrase domain from protein2 spa4288 from salmonella enterica, northeast structural3 genomics consortium target slr105h
|
| 25 | c2khvA_ |
|
not modelled |
99.3 |
16 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phage integrase;
PDBTitle: solution nmr structure of protein nmul_a0922 from2 nitrosospira multiformis. northeast structural genomics3 consortium target nmr38b.
|
| 26 | c2kj5A_ |
|
not modelled |
99.2 |
14 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phage integrase;
PDBTitle: solution nmr structure of a domain from a putative phage2 integrase protein nmul_a0064 from nitrosospira multiformis,3 northeast structural genomics consortium target nmr46c
|
| 27 | d1a0pa1 |
|
not modelled |
98.5 |
16 |
Fold:SAM domain-like
Superfamily:lambda integrase-like, N-terminal domain
Family:lambda integrase-like, N-terminal domain |
| 28 | d1f44a1 |
|
not modelled |
98.0 |
11 |
Fold:SAM domain-like
Superfamily:lambda integrase-like, N-terminal domain
Family:lambda integrase-like, N-terminal domain |
| 29 | c2v6eB_ |
|
not modelled |
97.2 |
17 |
PDB header:hydrolase
Chain: B: PDB Molecule:protelemorase;
PDBTitle: protelomerase telk complexed with substrate dna
|
| 30 | d1trra_ |
|
not modelled |
37.9 |
14 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:Trp repressor, TrpR |
| 31 | d2d6ya1 |
|
not modelled |
28.9 |
16 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Tetracyclin repressor-like, N-terminal domain |
| 32 | c2f4qA_ |
|
not modelled |
28.5 |
10 |
PDB header:isomerase
Chain: A: PDB Molecule:type i topoisomerase, putative;
PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib
|
| 33 | c2h7fX_ |
|
not modelled |
27.8 |
15 |
PDB header:isomerase/dna
Chain: X: PDB Molecule:dna topoisomerase 1;
PDBTitle: structure of variola topoisomerase covalently bound to dna
|
| 34 | d1jhga_ |
|
not modelled |
26.1 |
14 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:Trp repressor, TrpR |
| 35 | d1l8qa1 |
|
not modelled |
25.8 |
13 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:Chromosomal replication initiation factor DnaA C-terminal domain IV |
| 36 | c3fwcO_ |
|
not modelled |
21.6 |
11 |
PDB header:cell cycle, transcription
Chain: O: PDB Molecule:protein sus1;
PDBTitle: sac3:sus1:cdc31 complex
|
| 37 | d2auwa1 |
|
not modelled |
21.1 |
17 |
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:NE0471 C-terminal domain-like |
| 38 | c3sohB_ |
|
not modelled |
19.0 |
14 |
PDB header:motor protein
Chain: B: PDB Molecule:flagellar motor switch protein flig;
PDBTitle: architecture of the flagellar rotor
|
| 39 | c3lsgD_ |
|
not modelled |
18.7 |
13 |
PDB header:transcription regulator
Chain: D: PDB Molecule:two-component response regulator yesn;
PDBTitle: the crystal structure of the c-terminal domain of the two-2 component response regulator yesn from fusobacterium3 nucleatum subsp. nucleatum atcc 25586
|
| 40 | c1u78A_ |
|
not modelled |
18.6 |
8 |
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:transposable element tc3 transposase;
PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
|
| 41 | c3ic7A_ |
|
not modelled |
17.1 |
19 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of putative transcriptional regulator of gntr family2 from bacteroides thetaiotaomicron
|
| 42 | c3eetA_ |
|
not modelled |
17.0 |
14 |
PDB header:transcription regulator
Chain: A: PDB Molecule:putative gntr-family transcriptional regulator;
PDBTitle: crystal structure of putative gntr-family transcriptional2 regulator
|
| 43 | d1ijwc_ |
|
not modelled |
12.4 |
18 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Recombinase DNA-binding domain |
| 44 | d1hcra_ |
|
not modelled |
12.4 |
18 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Recombinase DNA-binding domain |
| 45 | d2aq0a1 |
|
not modelled |
11.0 |
16 |
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like |
| 46 | c3tqnC_ |
|
not modelled |
10.5 |
28 |
PDB header:transcription
Chain: C: PDB Molecule:transcriptional regulator, gntr family;
PDBTitle: structure of the transcriptional regulator of the gntr family, from2 coxiella burnetii.
|
| 47 | c3frwF_ |
|
not modelled |
9.9 |
13 |
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:putative trp repressor protein;
PDBTitle: crystal structure of putative trpr protein from ruminococcus obeum
|
| 48 | d1fsea_ |
|
not modelled |
9.4 |
15 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators) |
| 49 | d1a04a1 |
|
not modelled |
9.1 |
11 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators) |
| 50 | c3bwgA_ |
|
not modelled |
9.0 |
10 |
PDB header:transcription regulator
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk;
PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168
|
| 51 | c1x3uA_ |
|
not modelled |
8.9 |
17 |
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein fixj;
PDBTitle: solution structure of the c-terminal transcriptional2 activator domain of fixj from sinorhizobium melilot
|
| 52 | c2wv0H_ |
|
not modelled |
8.9 |
21 |
PDB header:transcription
Chain: H: PDB Molecule:hth-type transcriptional repressor yvoa;
PDBTitle: crystal structure of the gntr-hutc family member yvoa from2 bacillus subtilis
|
| 53 | d1s7oa_ |
|
not modelled |
8.9 |
16 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like |
| 54 | c2auwB_ |
|
not modelled |
8.1 |
17 |
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein ne0471;
PDBTitle: crystal structure of putative dna binding protein ne0471 from2 nitrosomonas europaea atcc 19718
|
| 55 | c2b9sA_ |
|
not modelled |
7.9 |
12 |
PDB header:isomerase/dna
Chain: A: PDB Molecule:topoisomerase i-like protein;
PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex
|
| 56 | c3neuA_ |
|
not modelled |
6.8 |
17 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin1836 protein;
PDBTitle: the crystal structure of a functionally-unknown protein lin1836 from2 listeria innocua clip11262
|
| 57 | d1k78a1 |
|
not modelled |
6.7 |
18 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain |
| 58 | c2krfB_ |
|
not modelled |
6.5 |
13 |
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulatory protein coma;
PDBTitle: nmr solution structure of the dna binding domain of competence protein2 a
|
| 59 | c2x48B_ |
|
not modelled |
6.4 |
26 |
PDB header:viral protein
Chain: B: PDB Molecule:cag38821;
PDBTitle: orf 55 from sulfolobus islandicus rudivirus 1
|
| 60 | c3fhkF_ |
|
not modelled |
6.3 |
16 |
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:upf0403 protein yphp;
PDBTitle: crystal structure of apc1446, b.subtilis yphp disulfide2 isomerase
|
| 61 | d1yioa1 |
|
not modelled |
6.3 |
17 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators) |
| 62 | c2eqrA_ |
|
not modelled |
6.2 |
12 |
PDB header:transcription
Chain: A: PDB Molecule:nuclear receptor corepressor 1;
PDBTitle: solution structure of the first sant domain from human2 nuclear receptor corepressor 1
|
| 63 | d1xc5a1 |
|
not modelled |
6.1 |
14 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Myb/SANT domain |
| 64 | d1bl0a2 |
|
not modelled |
6.0 |
12 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:AraC type transcriptional activator |
| 65 | d1v4ra1 |
|
not modelled |
6.0 |
17 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:GntR-like transcriptional regulators |
| 66 | c2yqkA_ |
|
not modelled |
5.9 |
15 |
PDB header:transcription/apoptosis
Chain: A: PDB Molecule:arginine-glutamic acid dipeptide repeats protein;
PDBTitle: solution structure of the sant domain in arginine-glutamic2 acid dipeptide (re) repeats
|
| 67 | c2rnjA_ |
|
not modelled |
5.7 |
18 |
PDB header:transcription
Chain: A: PDB Molecule:response regulator protein vrar;
PDBTitle: nmr structure of the s. aureus vrar dna binding domain
|
| 68 | d1lcda_ |
|
not modelled |
5.7 |
14 |
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator |
| 69 | d1rkta1 |
|
not modelled |
5.7 |
13 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Tetracyclin repressor-like, N-terminal domain |
| 70 | d2g7la1 |
|
not modelled |
5.6 |
15 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Tetracyclin repressor-like, N-terminal domain |
| 71 | c3by6C_ |
|
not modelled |
5.5 |
23 |
PDB header:transcription regulator
Chain: C: PDB Molecule:predicted transcriptional regulator;
PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni
|
| 72 | c3korD_ |
|
not modelled |
5.5 |
18 |
PDB header:transcription
Chain: D: PDB Molecule:possible trp repressor;
PDBTitle: crystal structure of a putative trp repressor from staphylococcus2 aureus
|
| 73 | d1m9ia2 |
|
not modelled |
5.5 |
16 |
Fold:Annexin
Superfamily:Annexin
Family:Annexin |
| 74 | d1i4aa_ |
|
not modelled |
5.4 |
14 |
Fold:Annexin
Superfamily:Annexin
Family:Annexin |
| 75 | d2csba1 |
|
not modelled |
5.4 |
23 |
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Topoisomerase V repeat domain |
| 76 | d1j09a1 |
|
not modelled |
5.4 |
12 |
Fold:An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Superfamily:An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Family:C-terminal domain of glutamyl-tRNA synthetase (GluRS) |
| 77 | d1hm6a_ |
|
not modelled |
5.3 |
16 |
Fold:Annexin
Superfamily:Annexin
Family:Annexin |
| 78 | d2gf5a1 |
|
not modelled |
5.3 |
8 |
Fold:DEATH domain
Superfamily:DEATH domain
Family:DEATH domain, DD |
| 79 | d1d5ya2 |
|
not modelled |
5.2 |
18 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:AraC type transcriptional activator |
| 80 | c2jpcA_ |
|
not modelled |
5.2 |
15 |
PDB header:dna binding protein
Chain: A: PDB Molecule:ssrb;
PDBTitle: ssrb dna binding protein
|
| 81 | d2iw5b1 |
|
not modelled |
5.2 |
13 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Myb/SANT domain |
| 82 | d2ozga1 |
|
not modelled |
5.1 |
9 |
Fold:SCP-like
Superfamily:SCP-like
Family:EF1021 C-terminal domain-like |
| 83 | d1efaa1 |
|
not modelled |
5.1 |
14 |
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator |
| 84 | c4a69C_ |
|
not modelled |
5.0 |
13 |
PDB header:transcription
Chain: C: PDB Molecule:nuclear receptor corepressor 2;
PDBTitle: structure of hdac3 bound to corepressor and inositol tetraphosphate
|
| 85 | c3f8mA_ |
|
not modelled |
5.0 |
14 |
PDB header:transcription
Chain: A: PDB Molecule:gntr-family protein transcriptional regulator;
PDBTitle: crystal structure of phnf from mycobacterium smegmatis
|
| 86 | d2crga1 |
|
not modelled |
5.0 |
12 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Myb/SANT domain |
