Email l.a.kelley@imperial.ac.uk Description P39394 Date Thu Jan 5 12:00:29 GMT 2012 Unique Job ID df94579a4b530043

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1mvfd_ 95.1 12 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 2 d1ub4c_ 89.1 16 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 3 c2hdeA_ 59.1 23 PDB header:transcription Chain: A: PDB Molecule:histone deacetylase complex subunit sap18; PDBTitle: solution structure of human sap18 4 d2j0na1 46.2 20 Fold:IpaD-like Superfamily:IpaD-like Family:IpaD-like 5 d1w44a_ 37.7 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 6 c3mhxB_ 37.4 18 PDB header:metal transport Chain: B: PDB Molecule:putative ferrous iron transport protein a; PDBTitle: crystal structure of stenotrophomonas maltophilia feoa complexed with2 zinc: a unique procaryotic sh3 domain protein possibly acting as a3 bacterial ferrous iron transport activating factor 7 d2dkya1 29.7 56 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:Variant SAM domain 8 c2jpiA_ 28.6 9 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical protein; PDBTitle: chemical shift assignments of pa4090 from pseudomonas2 aeruginosa 9 d1hn0a3 27.5 27 Fold:Hyaluronate lyase-like, C-terminal domain Superfamily:Hyaluronate lyase-like, C-terminal domain Family:Hyaluronate lyase-like, C-terminal domain 10 c2l66B_ 27.1 23 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, abrb family; PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea. 11 d2h80a1 26.7 75 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:Variant SAM domain 12 c1rijA_ 26.1 44 PDB header:de novo protein Chain: A: PDB Molecule:e6apn1 peptide; PDBTitle: e6-bind trp-cage (e6apn1) 13 d1rqpa1 25.7 14 Fold:Bacterial fluorinating enzyme, C-terminal domain Superfamily:Bacterial fluorinating enzyme, C-terminal domain Family:Bacterial fluorinating enzyme, C-terminal domain 14 d1je6a2 24.9 15 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 15 d2h3ja1 21.8 38 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 16 d1y8xb1 20.2 27 Fold:Activating enzymes of the ubiquitin-like proteins Superfamily:Activating enzymes of the ubiquitin-like proteins Family:Ubiquitin activating enzymes (UBA) 17 c1o4zA_ 20.0 25 PDB header:hydrolase Chain: A: PDB Molecule:beta-agarase b; PDBTitle: the three-dimensional structure of beta-agarase b from2 zobellia galactanivorans 18 d1o4za_ 20.0 25 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Glycosyl hydrolases family 16 19 d3frua2 19.4 13 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 20 d2qdya1 18.7 22 Fold:Nitrile hydratase alpha chain Superfamily:Nitrile hydratase alpha chain Family:Nitrile hydratase alpha chain 21 c3d33B_ not modelled 17.0 17 PDB header:unknown function Chain: B: PDB Molecule:domain of unknown function with an immunoglobulin-like PDBTitle: crystal structure of a duf3244 family protein with an immunoglobulin-2 like beta-sandwich fold (bvu_0276) from bacteroides vulgatus atcc3 8482 at 1.70 a resolution 22 c2k5lA_ not modelled 16.7 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:feoa; PDBTitle: solution nmr structure of protein feoa from clostridium2 thermocellum, northeast structural genomics consortium3 target cmr17 23 d1qvpa_ not modelled 16.5 26 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 24 c1x1aA_ not modelled 16.4 22 PDB header:transferase Chain: A: PDB Molecule:crtf-related protein; PDBTitle: crystal structure of bchu complexed with s-adenosyl-l-methionine 25 c2im5C_ not modelled 16.3 24 PDB header:transferase Chain: C: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of nicotinate phosphoribosyltransferase2 from porphyromonas gingivalis 26 d1vlfm1 not modelled 16.0 23 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 27 c3os4A_ not modelled 16.0 24 PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: the crystal structure of nicotinate phosphoribosyltransferase from2 yersinia pestis 28 c2k5fA_ not modelled 15.3 18 PDB header:metal transport Chain: A: PDB Molecule:ferrous iron transport protein a; PDBTitle: solution nmr structure of feoa protein from chlorobium2 tepidum. northeast structural genomics consortium target3 ctr121 29 d1yira2 not modelled 15.3 17 Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like 30 c2k4yA_ not modelled 15.1 23 PDB header:metal transport Chain: A: PDB Molecule:feoa-like protein; PDBTitle: nmr structure of feoa-like protein from clostridium2 acetobutylicum: northeast structural genomics consortium3 target car178 31 d1fp2a2 not modelled 15.0 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 32 c3mczB_ not modelled 14.8 28 PDB header:transferase Chain: B: PDB Molecule:o-methyltransferase; PDBTitle: the structure of an o-methyltransferase family protein from2 burkholderia thailandensis. 33 d1h0ha1 not modelled 14.6 14 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 34 d1udxa3 not modelled 14.5 36 Fold:Obg GTP-binding protein C-terminal domain Superfamily:Obg GTP-binding protein C-terminal domain Family:Obg GTP-binding protein C-terminal domain 35 d1dmra1 not modelled 14.2 18 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 36 d1yfba1 not modelled 14.0 26 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 37 d1s6la2 not modelled 13.6 38 Fold:NosL/MerB-like Superfamily:NosL/MerB-like Family:MerB-like 38 c2rf4A_ not modelled 13.5 21 PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 39 c3nrlB_ not modelled 13.2 28 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein rumgna_01417; PDBTitle: crystal structure of protein rumgna_01417 from ruminococcus gnavus,2 northeast structural genomics consortium target ugr76 40 d2jioa1 not modelled 12.8 16 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 41 c3pcsB_ not modelled 12.6 22 PDB header:protein transport/transferase Chain: B: PDB Molecule:espg; PDBTitle: structure of espg-pak2 autoinhibitory ialpha3 helix complex 42 d1ok3a2 not modelled 12.6 27 Fold:Complement control module/SCR domain Superfamily:Complement control module/SCR domain Family:Complement control module/SCR domain 43 c2klrA_ not modelled 12.5 27 PDB header:chaperone Chain: A: PDB Molecule:alpha-crystallin b chain; PDBTitle: solid-state nmr structure of the alpha-crystallin domain in alphab-2 crystallin oligomers 44 c1qw1A_ not modelled 12.1 25 PDB header:gene regulation Chain: A: PDB Molecule:diphtheria toxin repressor; PDBTitle: solution structure of the c-terminal domain of dtxr2 residues 110-226 45 d2fzva1 not modelled 12.0 17 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 46 d2fy9a1 not modelled 11.5 21 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 47 c2e5qA_ not modelled 11.5 24 PDB header:transcription Chain: A: PDB Molecule:phd finger protein 19; PDBTitle: solution structure of the tudor domain of phd finger2 protein 19, isoform b [homo sapiens] 48 c2dxbR_ not modelled 11.5 22 PDB header:hydrolase Chain: R: PDB Molecule:thiocyanate hydrolase subunit gamma; PDBTitle: recombinant thiocyanate hydrolase comprising partially-modified cobalt2 centers 49 d1kqfa1 not modelled 11.5 22 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 50 c3lstB_ not modelled 11.3 19 PDB header:transferase Chain: B: PDB Molecule:calo1 methyltransferase; PDBTitle: crystal structure of calo1, methyltransferase in calicheamicin2 biosynthesis, sah bound form 51 c3ocjA_ not modelled 11.2 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis 52 d1g8ka1 not modelled 11.2 14 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 53 c3qyhG_ not modelled 11.0 22 PDB header:lyase Chain: G: PDB Molecule:co-type nitrile hydratase alpha subunit; PDBTitle: crystal structure of co-type nitrile hydratase beta-h71l from2 pseudomonas putida. 54 c1fp2A_ not modelled 11.0 15 PDB header:transferase Chain: A: PDB Molecule:isoflavone o-methyltransferase; PDBTitle: crystal structure analysis of isoflavone o-methyltransferase 55 d1im8a_ not modelled 10.9 33 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Hypothetical protein HI0319 (YecO) 56 d1v29a_ not modelled 10.7 25 Fold:Nitrile hydratase alpha chain Superfamily:Nitrile hydratase alpha chain Family:Nitrile hydratase alpha chain 57 d1tmoa1 not modelled 10.7 20 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 58 d2qdyb1 not modelled 10.7 33 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain 59 c2dxcG_ not modelled 10.6 40 PDB header:hydrolase Chain: G: PDB Molecule:thiocyanate hydrolase subunit alpha; PDBTitle: recombinant thiocyanate hydrolase, fully-matured form 60 d2nn6h1 not modelled 10.5 26 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 61 d1eu1a1 not modelled 10.5 24 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 62 d1qw1a1 not modelled 10.4 24 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 63 c3pjyB_ not modelled 10.4 14 PDB header:transcription regulator Chain: B: PDB Molecule:hypothetical signal peptide protein; PDBTitle: crystal structure of a putative transcription regulator (r01717) from2 sinorhizobium meliloti 1021 at 1.55 a resolution 64 d2d9ra1 not modelled 10.4 23 Fold:Double-split beta-barrel Superfamily:AF2212/PG0164-like Family:PG0164-like 65 d1y5ia1 not modelled 10.2 21 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 66 d2gcxa1 not modelled 10.1 29 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 67 d1kyza2 not modelled 10.1 30 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 68 c2pjhB_ not modelled 9.9 16 PDB header:transport protein Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: strctural model of the p97 n domain- npl4 ubd complex 69 d1o4ya_ not modelled 9.9 15 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Glycosyl hydrolases family 16 70 d1qzza2 not modelled 9.8 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 71 d2iv2x1 not modelled 9.8 18 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 72 c2yqsA_ not modelled 9.4 20 PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of uridine-diphospho-n-acetylglucosamine2 pyrophosphorylase from candida albicans, in the product-binding form 73 d1b35b_ not modelled 9.3 22 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 74 c2wy3C_ not modelled 9.2 15 PDB header:immune system/viral protein Chain: C: PDB Molecule:mhc class i polypeptide-related sequence b; PDBTitle: structure of the hcmv ul16-micb complex elucidates select2 binding of a viral immunoevasin to diverse nkg2d ligands 75 d2pbza2 not modelled 9.2 42 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:PurP ATP-binding domain-like 76 d2ffsa1 not modelled 9.1 10 Fold:TBP-like Superfamily:Bet v1-like Family:PA1206-like 77 c2zbvC_ not modelled 9.0 11 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized conserved protein; PDBTitle: crystal structure of uncharacterized conserved protein from thermotoga2 maritima 78 d1vqoq1 not modelled 8.8 29 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal proteins L24p and L21e 79 c3dh0B_ not modelled 8.4 44 PDB header:transferase Chain: B: PDB Molecule:sam dependent methyltransferase; PDBTitle: crystal structure of a sam dependent methyltransferase from2 aquifex aeolicus 80 d3bzka4 not modelled 8.3 31 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 81 c1ezaA_ not modelled 8.2 8 PDB header:phosphotransferase Chain: A: PDB Molecule:enzyme i; PDBTitle: amino terminal domain of enzyme i from escherichia coli nmr,2 restrained regularized mean structure 82 c2zkrq_ not modelled 8.2 38 PDB header:ribosomal protein/rna Chain: Q: PDB Molecule:rna expansion segment es31 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 83 c3q9qB_ not modelled 8.2 24 PDB header:chaperone Chain: B: PDB Molecule:heat shock protein beta-1; PDBTitle: hspb1 fragment second crystal form 84 c2kieA_ not modelled 8.2 22 PDB header:hydrolase Chain: A: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1; PDBTitle: a ph domain within ocrl bridges clathrin mediated membrane2 trafficking to phosphoinositide metabolis 85 c2r7mA_ not modelled 8.0 38 PDB header:ligase Chain: A: PDB Molecule:5-formaminoimidazole-4-carboxamide-1-(beta)-d- PDBTitle: crystal structure of faicar synthetase (purp) from m.2 jannaschii complexed with amp 86 c3nnqA_ not modelled 7.8 26 PDB header:viral protein Chain: A: PDB Molecule:n-terminal domain of moloney murine leukemia virus PDBTitle: crystal structure of the n-terminal domain of moloney murine leukemia2 virus integrase, northeast structural genomics consortium target or3 87 c3p9kD_ not modelled 7.7 30 PDB header:transferase Chain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde 88 d2jb0b1 not modelled 7.6 35 Fold:His-Me finger endonucleases Superfamily:His-Me finger endonucleases Family:HNH-motif 89 c2vkcA_ not modelled 7.6 19 PDB header:hydrolase Chain: A: PDB Molecule:nedd4-binding protein 2; PDBTitle: solution structure of the b3bp smr domain 90 d2pwwa1 not modelled 7.6 18 Fold:TBP-like Superfamily:YugN-like Family:YugN-like 91 c3ilfA_ not modelled 7.4 23 PDB header:hydrolase/carbohydrate Chain: A: PDB Molecule:porphyranase a; PDBTitle: crystal structure of porphyranase a (pora) in complex with2 neo-porphyrotetraose 92 d1zt1a2 not modelled 7.4 23 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 93 c3tixB_ not modelled 7.3 24 PDB header:gene regulation/protein binding Chain: B: PDB Molecule:chromo domain-containing protein 1; PDBTitle: crystal structure of the chp1-tas3 complex core 94 c2zxeB_ not modelled 7.3 42 PDB header:hydrolase/transport protein Chain: B: PDB Molecule:na+,k+-atpase beta subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state 95 c3k7cC_ not modelled 7.2 19 PDB header:protein binding Chain: C: PDB Molecule:putative ntf2-like transpeptidase; PDBTitle: crystal structure of putative ntf2-like transpeptidase (np_281412.1)2 from campylobacter jejuni at 2.00 a resolution 96 d1cz5a1 not modelled 7.2 19 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 97 c2r5xA_ not modelled 7.1 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein; PDBTitle: crystal structure of uncharacterized conserved protein yugn from2 geobacillus kaustophilus hta426 98 c3u02C_ not modelled 7.0 4 PDB header:transcription Chain: C: PDB Molecule:putative transcription-associated protein tfiis; PDBTitle: crystal structure of the trna modifier tias from pyrococcus furiosus,2 northeast structural genomics consortium target pfr225 99 c2c45F_ not modelled 6.9 19 PDB header:lyase Chain: F: PDB Molecule:aspartate 1-decarboxylase precursor; PDBTitle: native precursor of pyruvoyl dependent aspartate2 decarboxylase