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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1o4zA_

Fold library idPDB HeaderMoleculeTitle
c1o4zA_PDB header: hydrolaseChain: A: PDB Molecule: beta-agarase b;PDBTitle: the three-dimensional structure of beta-agarase b from2 zobellia galactanivorans


Added to library: Tue Mar 16 12:48:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGE
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Known secondary structure (DSSP)
GGGS


S


TT
TT
B


S
B
TT


SS
SSS


STT
GGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSES
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Known secondary structure (DSSP)

TTSS

SS
B
SS

SSSSTTSS


STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRT
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Known secondary structure (DSSP) TT
T
TTTT


SGGG

S

GGGS
TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENN
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Known secondary structure (DSSP) S
TT
TTBSSSTT
TTS

B

S
S


S
TT

GGG




T
TGGG
 .........290.....
Sequence TFGVDWIRIYKPVEK
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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