Email l.a.kelley@imperial.ac.uk Description P45748 Date Thu Jan 5 12:03:29 GMT 2012 Unique Job ID deefea388e9df95c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2eqaA_ 100.0 31 PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein st1526; PDBTitle: crystal structure of the hypothetical sua5 protein from2 sulfolobus tokodaii 2 d1hrua_ 100.0 99 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 3 d1k7ja_ 100.0 24 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 4 d1jcua_ 100.0 26 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 5 c3l7vA_ 100.0 15 PDB header:transcription Chain: A: PDB Molecule:putative uncharacterized protein smu.1377c; PDBTitle: crystal structure of a hypothetical protein smu.1377c from2 streptococcus mutans ua159 6 c3tsuA_ 100.0 23 PDB header:transferase Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate 7 d1hq0a_ 60.1 35 Fold:CNF1/YfiH-like putative cysteine hydrolases Superfamily:CNF1/YfiH-like putative cysteine hydrolases Family:Type 1 cytotoxic necrotizing factor, catalytic domain 8 c2qs0A_ 58.6 20 PDB header:biosynthetic protein Chain: A: PDB Molecule:quinolinate synthetase a; PDBTitle: quinolinate synthase from pyrococcus furiosus 9 c3p3dA_ 56.7 35 PDB header:nuclear protein Chain: A: PDB Molecule:nucleoporin 53; PDBTitle: crystal structure of the nup53 rrm domain from pichia guilliermondii 10 c2frxD_ 42.6 24 PDB header:transferase Chain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli 11 c3mioA_ 38.9 10 PDB header:lyase Chain: A: PDB Molecule:3,4-dihydroxy-2-butanone 4-phosphate synthase; PDBTitle: crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase2 domain from mycobacterium tuberculosis at ph 6.00 12 d1t5la1 35.2 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 13 c3m4xA_ 34.9 23 PDB header:transferase Chain: A: PDB Molecule:nol1/nop2/sun family protein; PDBTitle: structure of a ribosomal methyltransferase 14 c3m6wA_ 31.0 26 PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine 15 d1snna_ 28.7 20 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 16 c1solA_ 27.3 43 PDB header:actin-binding protein Chain: A: PDB Molecule:gelsolin (150-169); PDBTitle: a pip2 and f-actin-binding site of gelsolin, residue 150-2 169 (nmr, averaged structure) 17 d1ixka_ 23.7 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:NOL1/NOP2/sun 18 c2oemA_ 17.4 12 PDB header:isomerase Chain: A: PDB Molecule:2,3-diketo-5-methylthiopentyl-1-phosphate enolase; PDBTitle: crystal structure of a rubisco-like protein from geobacillus2 kaustophilus liganded with mg2+ and 2,3-diketohexane 1-phosphate 19 c2qj8B_ 17.3 16 PDB header:hydrolase Chain: B: PDB Molecule:mlr6093 protein; PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution 20 d1k4ia_ 17.2 17 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 21 d1pg5a1 not modelled 17.1 8 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 22 d1sqga2 not modelled 16.9 23 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:NOL1/NOP2/sun 23 d1gk8a1 not modelled 16.2 15 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 24 c2yxlA_ not modelled 16.1 22 PDB header:transferase Chain: A: PDB Molecule:450aa long hypothetical fmu protein; PDBTitle: crystal structure of ph0851 25 c2y75F_ not modelled 15.2 11 PDB header:transcription Chain: F: PDB Molecule:hth-type transcriptional regulator cymr; PDBTitle: the structure of cymr (yrzc) the global cysteine regulator2 of b. subtilis 26 c1sqgA_ not modelled 15.0 18 PDB header:transferase Chain: A: PDB Molecule:sun protein; PDBTitle: the crystal structure of the e. coli fmu apoenzyme at 1.652 a resolution 27 c1pt9B_ not modelled 14.5 11 PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial; PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue 28 d8ruca1 not modelled 14.0 17 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 29 d1bhea_ not modelled 13.8 8 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 30 c3a4tA_ not modelled 13.7 27 PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase mj0026; PDBTitle: crystal structure of atrm4 from m.jannaschii with sinefungin 31 c2vduE_ not modelled 13.3 19 PDB header:transferase Chain: E: PDB Molecule:trna (guanine-n(7)-)-methyltransferase; PDBTitle: structure of trm8-trm82, the yeast trna m7g methylation2 complex 32 d1d4oa_ not modelled 13.3 11 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Transhydrogenase domain III (dIII) 33 c2bruC_ not modelled 12.4 17 PDB header:oxidoreductase Chain: C: PDB Molecule:nad(p) transhydrogenase subunit beta; PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase 34 d1pnoa_ not modelled 11.7 21 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Transhydrogenase domain III (dIII) 35 d1q32a2 not modelled 11.5 67 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1 36 c3ckkA_ not modelled 10.9 14 PDB header:transferase Chain: A: PDB Molecule:trna (guanine-n(7)-)-methyltransferase; PDBTitle: crystal structure of human methyltransferase-like protein 1 37 d1ylfa1 not modelled 10.6 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional regulator Rrf2 38 c3nwrA_ not modelled 10.2 20 PDB header:lyase Chain: A: PDB Molecule:a rubisco-like protein; PDBTitle: crystal structure of a rubisco-like protein from burkholderia fungorum 39 d1jy1a2 not modelled 10.1 67 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1 40 d1tksa_ not modelled 9.9 15 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 41 d1g57a_ not modelled 9.7 12 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 42 d1bwva1 not modelled 9.4 18 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 43 c3cgxA_ not modelled 9.0 11 PDB header:transferase Chain: A: PDB Molecule:putative nucleotide-diphospho-sugar transferase; PDBTitle: crystal structure of putative nucleotide-diphospho-sugar transferase2 (yp_389115.1) from desulfovibrio desulfuricans g20 at 1.90 a3 resolution 44 d1yzha1 not modelled 8.9 17 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:TrmB-like 45 d1ekxa1 not modelled 8.8 11 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 46 c2eq8C_ not modelled 8.6 26 PDB header:oxidoreductase Chain: C: PDB Molecule:pyruvate dehydrogenase complex, dihydrolipoamide PDBTitle: crystal structure of lipoamide dehydrogenase from thermus thermophilus2 hb8 with psbdp 47 c3sq3C_ not modelled 8.4 67 PDB header:hydrolase Chain: C: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure analysis of the yeast tyrosyl-dna phosphodiesterase2 h182a mutant 48 d1wzua1 not modelled 8.3 25 Fold:NadA-like Superfamily:NadA-like Family:NadA-like 49 d1wdda1 not modelled 8.3 16 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 50 c3fk4A_ not modelled 8.3 17 PDB header:isomerase Chain: A: PDB Molecule:rubisco-like protein; PDBTitle: crystal structure of rubisco-like protein from bacillus2 cereus atcc 14579 51 d1vlva1 not modelled 8.2 20 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 52 d1m0sa1 not modelled 7.9 26 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain 53 c1nopB_ not modelled 7.8 67 PDB header:hydrolase/dna Chain: B: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure of human tyrosyl-dna phosphodiesterase2 (tdp1) in complex with vanadate, dna and a human3 topoisomerase i-derived peptide 54 d2ahua2 not modelled 7.8 15 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:CoA transferase alpha subunit-like 55 c1q32C_ not modelled 7.5 67 PDB header:replication,transcription,hydrolase Chain: C: PDB Molecule:tyrosyl-dna phosphodiesterase; PDBTitle: crystal structure analysis of the yeast tyrosyl-dna2 phosphodiesterase 56 d1rmga_ not modelled 7.3 15 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 57 c3p04A_ not modelled 7.1 0 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 58 d1rbla1 not modelled 6.9 15 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 59 d1lk5a1 not modelled 6.9 24 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain 60 c2zviB_ not modelled 6.9 12 PDB header:isomerase Chain: B: PDB Molecule:2,3-diketo-5-methylthiopentyl-1-phosphate PDBTitle: crystal structure of 2,3-diketo-5-methylthiopentyl-1-2 phosphate enolase from bacillus subtilis 61 c2ouiB_ not modelled 6.8 14 PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: d275p mutant of alcohol dehydrogenase from protozoa entamoeba2 histolytica 62 c2z99A_ not modelled 6.8 16 PDB header:cell cycle Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of scpb from mycobacterium tuberculosis 63 d1ej7l1 not modelled 6.8 15 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 64 c3caaB_ not modelled 6.7 38 PDB header:serpin Chain: B: PDB Molecule:antichymotrypsin; PDBTitle: cleaved antichymotrypsin a347r 65 c3p04B_ not modelled 6.5 0 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 66 d2d69a1 not modelled 6.5 10 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 67 d2i09a2 not modelled 6.4 40 Fold:DeoB insert domain-like Superfamily:DeoB insert domain-like Family:DeoB insert domain-like 68 d2hi6a1 not modelled 6.4 22 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:AF0055-like 69 d1ykwa1 not modelled 6.3 12 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 70 c3r3hA_ not modelled 6.3 18 PDB header:transferase Chain: A: PDB Molecule:o-methyltransferase, sam-dependent; PDBTitle: crystal structure of o-methyltransferase from legionella pneumophila 71 c1zwvA_ not modelled 6.2 12 PDB header:transferase Chain: A: PDB Molecule:lipoamide acyltransferase component of branched- PDBTitle: solution structure of the subunit binding domain (hbsbd) of2 the human mitochondrial branched-chain alpha-ketoacid3 dehydrogenase 72 d2f06a1 not modelled 6.1 21 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 73 d1bxna1 not modelled 6.1 13 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 74 c3qfwB_ not modelled 6.0 13 PDB header:lyase Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase large PDBTitle: crystal structure of rubisco-like protein from rhodopseudomonas2 palustris 75 d1ml4a1 not modelled 6.0 11 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 76 c3tfwB_ not modelled 6.0 10 PDB header:transferase Chain: B: PDB Molecule:putative o-methyltransferase; PDBTitle: crystal structure of a putative o-methyltransferase from klebsiella2 pneumoniae 77 c1bwvA_ not modelled 6.0 17 PDB header:lyase Chain: A: PDB Molecule:protein (ribulose bisphosphate carboxylase); PDBTitle: activated ribulose 1,5-bisphosphate carboxylase/oxygenase (rubisco)2 complexed with the reaction intermediate analogue 2-carboxyarabinitol3 1,5-bisphosphate 78 c3shoA_ not modelled 5.9 27 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) 79 c2h8bB_ not modelled 5.6 43 PDB header:hormone/growth factor Chain: B: PDB Molecule:insulin-like 3; PDBTitle: solution structure of insl3 80 d1nria_ not modelled 5.6 9 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 81 c1nriA_ not modelled 5.6 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein hi0754; PDBTitle: crystal structure of putative phosphosugar isomerase hi0754 from2 haemophilus influenzae 82 d2fcaa1 not modelled 5.6 10 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:TrmB-like 83 c2dvzA_ not modelled 5.5 23 PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of a periplasmic transporter 84 d1otha1 not modelled 5.5 20 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 85 d2hc5a1 not modelled 5.3 23 Fold:FlaG-like Superfamily:FlaG-like Family:FlaG-like 86 d2c42a3 not modelled 5.2 11 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Pyruvate-ferredoxin oxidoreductase, PFOR, domain II 87 c3sftA_ not modelled 5.2 6 PDB header:hydrolase Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate PDBTitle: crystal structure of thermotoga maritima cheb methylesterase catalytic2 domain 88 c3fs2A_ not modelled 5.1 5 PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution 89 c3dxyA_ not modelled 5.1 17 PDB header:transferase Chain: A: PDB Molecule:trna (guanine-n(7)-)-methyltransferase; PDBTitle: crystal structure of ectrmb in complex with sam