Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	R	I	E	V	T	I	A	K	T	S	P	L	P	A	G	A	I	D	A	L	A	G	E	L	S	R	R	I	Q	Y	A	F	P	D	N	E	G	H	V	S	V	R	Y	A	A	A	N	N	L	S	V	I	G	A	T	K	E	D	K
Secondary structure
SS confidence
Disorder		?						?	?	?	?	?	?	?	?	?	?																													?	?	?	?		?				?	?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Sequence		Q	R	I	S	E	I	L	Q	E	T	W	E	S	A	D	D	W	F	V	S	E
Secondary structure
SS confidence
Disorder																			?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1ghh chain A Region: 1 - 81 Aligned: 81 Modelled: 81 Confidence: 100.0% Identity: 100% Fold: DNA damage-inducible protein DinI Superfamily: DNA damage-inducible protein DinI Family: DNA damage-inducible protein DinI Phyre2 PDB 2j58 chain G Region: 17 - 55 Aligned: 39 Modelled: 39 Confidence: 65.2% Identity: 13% PDB header:membrane protein Chain: G: PDB Molecule:outer membrane lipoprotein wza; PDBTitle: the structure of wza Phyre2 PDB 2w8i chain G Region: 17 - 55 Aligned: 39 Modelled: 39 Confidence: 56.1% Identity: 13% PDB header:membrane protein Chain: G: PDB Molecule:putative outer membrane lipoprotein wza; PDBTitle: crystal structure of wza24-345. Phyre2 PDB 3gr0 chain D Region: 18 - 70 Aligned: 52 Modelled: 53 Confidence: 38.6% Identity: 10% PDB header:membrane protein Chain: D: PDB Molecule:protein prgh; PDBTitle: periplasmic domain of the t3ss inner membrane protein prgh from2 s.typhimurium (fragment 170-362) Phyre2 PDB 1kn0 chain A Region: 18 - 77 Aligned: 48 Modelled: 54 Confidence: 38.6% Identity: 21% Fold: dsRBD-like Superfamily: dsRNA-binding domain-like Family: The homologous-pairing domain of Rad52 recombinase Phyre2 PDB 3gr1 chain A Region: 18 - 70 Aligned: 52 Modelled: 53 Confidence: 35.3% Identity: 8% PDB header:membrane protein Chain: A: PDB Molecule:protein prgh; PDBTitle: periplamic domain of the t3ss inner membrane protein prgh2 from s.typhimurium (fragment 170-392) Phyre2 PDB 2akj chain A domain 1 Region: 12 - 69 Aligned: 54 Modelled: 58 Confidence: 23.9% Identity: 19% Fold: Ferredoxin-like Superfamily: Nitrite/Sulfite reductase N-terminal domain-like Family: Duplicated SiR/NiR-like domains 1 and 3 Phyre2 PDB 1ciy chain A domain 1 Region: 29 - 53 Aligned: 20 Modelled: 25 Confidence: 23.8% Identity: 30% Fold: Galactose-binding domain-like Superfamily: Galactose-binding domain-like Family: delta-Endotoxin, C-terminal domain Phyre2 PDB 1g5m chain A Region: 17 - 77 Aligned: 49 Modelled: 61 Confidence: 23.7% Identity: 18% Fold: Toxins' membrane translocation domains Superfamily: Bcl-2 inhibitors of programmed cell death Family: Bcl-2 inhibitors of programmed cell death Phyre2 PDB 2pfz chain A Region: 5 - 77 Aligned: 69 Modelled: 70 Confidence: 23.7% Identity: 25% PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of dctp6, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid Phyre2 PDB 1ji6 chain A domain 1 Region: 29 - 53 Aligned: 20 Modelled: 25 Confidence: 23.3% Identity: 30% Fold: Galactose-binding domain-like Superfamily: Galactose-binding domain-like Family: delta-Endotoxin, C-terminal domain Phyre2 PDB 1h2i chain G Region: 18 - 77 Aligned: 48 Modelled: 54 Confidence: 22.9% Identity: 21% PDB header:dna-binding protein Chain: G: PDB Molecule:dna repair protein rad52 homolog; PDBTitle: human rad52 protein, n-terminal domain Phyre2 PDB 1zj8 chain A domain 1 Region: 12 - 70 Aligned: 55 Modelled: 59 Confidence: 21.4% Identity: 9% Fold: Ferredoxin-like Superfamily: Nitrite/Sulfite reductase N-terminal domain-like Family: Duplicated SiR/NiR-like domains 1 and 3 Phyre2 PDB 2zzx chain D Region: 5 - 77 Aligned: 69 Modelled: 73 Confidence: 20.4% Identity: 17% PDB header:transport protein Chain: D: PDB Molecule:abc transporter, solute-binding protein; PDBTitle: crystal structure of a periplasmic substrate binding protein in2 complex with lactate Phyre2 PDB 2o90 chain A Region: 16 - 55 Aligned: 40 Modelled: 40 Confidence: 19.8% Identity: 13% PDB header:lyase Chain: A: PDB Molecule:dihydroneopterin aldolase; PDBTitle: atomic resolution crystal structure of e.coli2 dihydroneopterin aldolase in complex with neopterin Phyre2 PDB 2qfi chain B Region: 3 - 46 Aligned: 44 Modelled: 44 Confidence: 19.3% Identity: 16% PDB header:transport protein Chain: B: PDB Molecule:ferrous-iron efflux pump fief; PDBTitle: structure of the zinc transporter yiip Phyre2 PDB 1aop chain A domain 2 Region: 22 - 69 Aligned: 43 Modelled: 48 Confidence: 19.0% Identity: 23% Fold: Ferredoxin-like Superfamily: Nitrite/Sulfite reductase N-terminal domain-like Family: Duplicated SiR/NiR-like domains 1 and 3 Phyre2 PDB 1dlc chain A domain 1 Region: 39 - 53 Aligned: 15 Modelled: 15 Confidence: 18.1% Identity: 13% Fold: Galactose-binding domain-like Superfamily: Galactose-binding domain-like Family: delta-Endotoxin, C-terminal domain Phyre2 PDB 2z51 chain A Region: 14 - 42 Aligned: 29 Modelled: 29 Confidence: 15.5% Identity: 10% PDB header:metal transport Chain: A: PDB Molecule:nifu-like protein 2, chloroplast; PDBTitle: crystal structure of arabidopsis cnfu involved in iron-2 sulfur cluster biosynthesis Phyre2 PDB 1usd chain A Region: 11 - 28 Aligned: 18 Modelled: 18 Confidence: 15.1% Identity: 28% PDB header:signaling protein Chain: A: PDB Molecule:vasodilator-stimulated phosphoprotein; PDBTitle: human vasp tetramerisation domain l352m Phyre2 1 d1ghha_ 2 c2j58G_ 3 c2w8iG_ 4 c3gr0D_ 5 d1kn0a_ 6 c3gr1A_ 7 d2akja1 8 d1ciya1 9 d1g5ma_ 10 c2pfzA_ 11 d1ji6a1 12 c1h2iG_ 13 d1zj8a1 14 c2zzxD_ 15 c2o90A_ 16 c2qfiB_ 17 d1aopa2 18 d1dlca1 19 c2z51A_ 20 c1usdA_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ghha_ 100.0 100 Fold:DNA damage-inducible protein DinI Superfamily:DNA damage-inducible protein DinI Family:DNA damage-inducible protein DinI 2 c2j58G_ 65.2 13 PDB header:membrane protein Chain: G: PDB Molecule:outer membrane lipoprotein wza; PDBTitle: the structure of wza 3 c2w8iG_ 56.1 13 PDB header:membrane protein Chain: G: PDB Molecule:putative outer membrane lipoprotein wza; PDBTitle: crystal structure of wza24-345. 4 c3gr0D_ 38.6 10 PDB header:membrane protein Chain: D: PDB Molecule:protein prgh; PDBTitle: periplasmic domain of the t3ss inner membrane protein prgh from2 s.typhimurium (fragment 170-362) 5 d1kn0a_ 38.6 21 Fold:dsRBD-like Superfamily:dsRNA-binding domain-like Family:The homologous-pairing domain of Rad52 recombinase 6 c3gr1A_ 35.3 8 PDB header:membrane protein Chain: A: PDB Molecule:protein prgh; PDBTitle: periplamic domain of the t3ss inner membrane protein prgh2 from s.typhimurium (fragment 170-392) 7 d2akja1 23.9 19 Fold:Ferredoxin-like Superfamily:Nitrite/Sulfite reductase N-terminal domain-like Family:Duplicated SiR/NiR-like domains 1 and 3 8 d1ciya1 23.8 30 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 9 d1g5ma_ 23.7 18 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 10 c2pfzA_ 23.7 25 PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of dctp6, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid 11 d1ji6a1 23.3 30 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 12 c1h2iG_ 22.9 21 PDB header:dna-binding protein Chain: G: PDB Molecule:dna repair protein rad52 homolog; PDBTitle: human rad52 protein, n-terminal domain 13 d1zj8a1 21.4 9 Fold:Ferredoxin-like Superfamily:Nitrite/Sulfite reductase N-terminal domain-like Family:Duplicated SiR/NiR-like domains 1 and 3 14 c2zzxD_ 20.4 17 PDB header:transport protein Chain: D: PDB Molecule:abc transporter, solute-binding protein; PDBTitle: crystal structure of a periplasmic substrate binding protein in2 complex with lactate 15 c2o90A_ 19.8 13 PDB header:lyase Chain: A: PDB Molecule:dihydroneopterin aldolase; PDBTitle: atomic resolution crystal structure of e.coli2 dihydroneopterin aldolase in complex with neopterin 16 c2qfiB_ 19.3 16 PDB header:transport protein Chain: B: PDB Molecule:ferrous-iron efflux pump fief; PDBTitle: structure of the zinc transporter yiip 17 d1aopa2 19.0 23 Fold:Ferredoxin-like Superfamily:Nitrite/Sulfite reductase N-terminal domain-like Family:Duplicated SiR/NiR-like domains 1 and 3 18 d1dlca1 18.1 13 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 19 c2z51A_ 15.5 10 PDB header:metal transport Chain: A: PDB Molecule:nifu-like protein 2, chloroplast; PDBTitle: crystal structure of arabidopsis cnfu involved in iron-2 sulfur cluster biosynthesis 20 c1usdA_ 15.1 28 PDB header:signaling protein Chain: A: PDB Molecule:vasodilator-stimulated phosphoprotein; PDBTitle: human vasp tetramerisation domain l352m 21 c2xa0A_ not modelled 15.1 18 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis regulator bcl-2; PDBTitle: crystal structure of bcl-2 in complex with a bax bh32 peptide 22 d1ev0a_ not modelled 14.7 17 Fold:Cell division protein MinE topological specificity domain Superfamily:Cell division protein MinE topological specificity domain Family:Cell division protein MinE topological specificity domain 23 c2v4jE_ not modelled 14.5 17 PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration 24 c2kz0A_ not modelled 12.7 27 PDB header:transcription Chain: A: PDB Molecule:bola family protein; PDBTitle: solution structure of a bola protein (ech_0303) from ehrlichia2 chaffeensis. seattle structural genomics center for infectious3 disease target ehcha.10365.a 25 c2dbiA_ not modelled 12.3 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ybiu; PDBTitle: crystal structure of a hypothetical protein jw0805 from2 escherichia coli 26 c2cg8B_ not modelled 11.8 21 PDB header:lyase/transferase Chain: B: PDB Molecule:dihydroneopterin aldolase 6-hydroxymethyl-7,8- PDBTitle: the bifunctional dihydroneopterin aldolase 6-hydroxymethyl-2 7,8-dihydropterin synthase from streptococcus pneumoniae 27 c1zj8B_ not modelled 11.3 9 PDB header:oxidoreductase Chain: B: PDB Molecule:probable ferredoxin-dependent nitrite reductase nira; PDBTitle: structure of mycobacterium tuberculosis nira protein 28 c3u5gB_ not modelled 10.7 23 PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s1-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution 29 d2csga1 not modelled 10.6 24 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:YbiU-like 30 d1b9la_ not modelled 10.6 10 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:DHN aldolase/epimerase 31 c3tr3A_ not modelled 10.2 10 PDB header:unknown function Chain: A: PDB Molecule:bola; PDBTitle: structure of a bola protein homologue from coxiella burnetii 32 c2w7aA_ not modelled 10.1 28 PDB header:rna-binding protein Chain: A: PDB Molecule:line-1 orf1p; PDBTitle: structure of the human line-1 orf1p central domain 33 c3d0wD_ not modelled 9.9 46 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:yflh protein; PDBTitle: crystal structure of yflh protein from bacillus subtilis.2 northeast structural genomics consortium target sr326 34 c1xs3A_ not modelled 9.7 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein xc975; PDBTitle: solution structure analysis of the xc975 protein 35 c2xzm4_ not modelled 9.2 14 PDB header:ribosome Chain: 4: PDB Molecule:40s ribosomal protein s3a; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 36 d1ekea_ not modelled 9.2 18 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Ribonuclease H 37 d1izna_ not modelled 8.9 22 Fold:Subunits of heterodimeric actin filament capping protein Capz Superfamily:Subunits of heterodimeric actin filament capping protein Capz Family:Capz alpha-1 subunit 38 d1pv0a_ not modelled 8.5 29 Fold:Long alpha-hairpin Superfamily:Sporulation inhibitor Sda Family:Sporulation inhibitor Sda 39 c2kxoA_ not modelled 8.4 7 PDB header:cell cycle Chain: A: PDB Molecule:cell division topological specificity factor; PDBTitle: solution nmr structure of the cell division regulator mine protein2 from neisseria gonorrhoeae 40 c2yqrA_ not modelled 8.2 16 PDB header:rna binding protein Chain: A: PDB Molecule:kiaa0907 protein; PDBTitle: solution structure of the kh domain in kiaa0907 protein 41 c2jttD_ not modelled 8.0 29 PDB header:calcium binding protein/antitumor protei Chain: D: PDB Molecule:calcyclin-binding protein; PDBTitle: solution structure of calcium loaded s100a6 bound to c-2 terminal siah-1 interacting protein 42 d2qfia1 not modelled 8.0 15 Fold:Alpha-lytic protease prodomain-like Superfamily:Cation efflux protein cytoplasmic domain-like Family:Cation efflux protein cytoplasmic domain-like 43 c1sqlN_ not modelled 7.8 12 PDB header:lyase Chain: N: PDB Molecule:dihydroneopterin aldolase; PDBTitle: crystal structure of 7,8-dihydroneopterin aldolase in2 complex with guanine 44 d1zbsa2 not modelled 7.7 17 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:BadF/BadG/BcrA/BcrD-like 45 c2zztA_ not modelled 7.7 13 PDB header:transport protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the cytosolic domain of the cation2 diffusion facilitator family protein 46 c3r9jD_ not modelled 7.7 12 PDB header:cell cycle,hydrolase/cell cycle Chain: D: PDB Molecule:cell division topological specificity factor; PDBTitle: 4.3a resolution structure of a mind-mine(i24n) protein complex 47 d2akja2 not modelled 7.7 16 Fold:Ferredoxin-like Superfamily:Nitrite/Sulfite reductase N-terminal domain-like Family:Duplicated SiR/NiR-like domains 1 and 3 48 d1a6qa1 not modelled 7.5 17 Fold:Another 3-helical bundle Superfamily:Protein serine/threonine phosphatase 2C, C-terminal domain Family:Protein serine/threonine phosphatase 2C, C-terminal domain 49 d1k46a_ not modelled 7.4 15 Fold:YopH tyrosine phosphatase N-terminal domain Superfamily:YopH tyrosine phosphatase N-terminal domain Family:YopH tyrosine phosphatase N-terminal domain 50 d2ponb1 not modelled 7.3 20 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 51 d1zj8a2 not modelled 6.9 18 Fold:Ferredoxin-like Superfamily:Nitrite/Sulfite reductase N-terminal domain-like Family:Duplicated SiR/NiR-like domains 1 and 3 52 c3c7bE_ not modelled 6.9 15 PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit beta; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus 53 c3oxnD_ not modelled 6.9 14 PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: the crystal structure of a putative transcriptional regulator from2 vibrio parahaemolyticus 54 c2veqA_ not modelled 6.7 35 PDB header:cell cycle Chain: A: PDB Molecule:centromere dna-binding protein complex cbf3 PDBTitle: insights into kinetochore-dna interactions from the2 structure of cep3p 55 c2kilA_ not modelled 6.6 6 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: nmr structure of the h103g mutant so2144 h-nox domain from2 shewanella oneidensis in the fe(ii)co ligation state 56 d1d4ua1 not modelled 6.5 31 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain 57 d3bypa1 not modelled 6.5 22 Fold:Alpha-lytic protease prodomain-like Superfamily:Cation efflux protein cytoplasmic domain-like Family:Cation efflux protein cytoplasmic domain-like 58 c3fljA_ not modelled 6.3 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein conserved in bacteria with a PDBTitle: crystal structure of uncharacterized protein conserved in bacteria2 with a cystatin-like fold (yp_168589.1) from silicibacter pomeroyi3 dss-3 at 2.00 a resolution 59 d1wjwa_ not modelled 6.2 11 Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain 60 d2esna2 not modelled 6.1 19 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 61 c3dukD_ not modelled 6.1 26 PDB header:unknown function Chain: D: PDB Molecule:ntf2-like protein of unknown function; PDBTitle: crystal structure of a ntf2-like protein of unknown function2 (mfla_0564) from methylobacillus flagellatus kt at 2.200 a resolution 62 d1p90a_ not modelled 6.1 32 Fold:Ribonuclease H-like motif Superfamily:Nitrogenase accessory factor-like Family:Nitrogenase accessory factor 63 d2pa2a1 not modelled 6.0 17 Fold:alpha/beta-Hammerhead Superfamily:Ribosomal protein L16p/L10e Family:Ribosomal protein L10e 64 d1otka_ not modelled 5.7 16 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 65 c3c66B_ not modelled 5.7 22 PDB header:transferase Chain: B: PDB Molecule:poly(a) polymerase; PDBTitle: yeast poly(a) polymerase in complex with fip1 residues 80-105 66 c2akjA_ not modelled 5.6 15 PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin--nitrite reductase, chloroplast; PDBTitle: structure of spinach nitrite reductase 67 d1fx0a1 not modelled 5.4 20 Fold:Left-handed superhelix Superfamily:C-terminal domain of alpha and beta subunits of F1 ATP synthase Family:C-terminal domain of alpha and beta subunits of F1 ATP synthase 68 d1pjqa3 not modelled 5.4 22 Fold:Siroheme synthase middle domains-like Superfamily:Siroheme synthase middle domains-like Family:Siroheme synthase middle domains-like 69 d3c7bb2 not modelled 5.4 16 Fold:Ferredoxin-like Superfamily:Nitrite/Sulfite reductase N-terminal domain-like Family:DsrA/DsrB N-terminal-domain-like 70 d1s3aa1 not modelled 5.3 18 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Mitochondrial ribosomal protein L51/S25/CI-B8 domain 71 c2l82A_ not modelled 5.2 33 PDB header:de novo protein Chain: A: PDB Molecule:designed protein or32; PDBTitle: solution nmr structure of de novo designed protein, p-loop ntpase2 fold, northeast structural genomics consortium target or32 72 d2ctja1 not modelled 5.1 18 Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I) 73 c2d4gA_ not modelled 5.1 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein bsu11850; PDBTitle: structure of yjcg protein, a putative 2'-5' rna ligase from2 bacillus subtilis 74 d1q46a1 not modelled 5.1 22 Fold:SAM domain-like Superfamily:eIF2alpha middle domain-like Family:eIF2alpha middle domain-like 75 d1q1oa_ not modelled 5.0 18 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain 76 d1koya_ not modelled 5.0 38 Fold:C-terminal domain of DFF45/ICAD (DFF-C domain) Superfamily:C-terminal domain of DFF45/ICAD (DFF-C domain) Family:C-terminal domain of DFF45/ICAD (DFF-C domain)

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0