Email l.a.kelley@imperial.ac.uk Description P32169 Date Thu Jan 5 11:49:47 GMT 2012 Unique Job ID dce8e934e642c4d9

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ojra_ 100.0 100 Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:AraD-like aldolase/epimerase 2 d1pvta_ 100.0 24 Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:AraD-like aldolase/epimerase 3 d1e4cp_ 100.0 19 Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:AraD-like aldolase/epimerase 4 c3ocrA_ 100.0 20 PDB header:lyase Chain: A: PDB Molecule:class ii aldolase/adducin domain protein; PDBTitle: crystal structure of aldolase ii superfamily protein from pseudomonas2 syringae 5 c2opiB_ 100.0 20 PDB header:lyase Chain: B: PDB Molecule:l-fuculose-1-phosphate aldolase; PDBTitle: crystal structure of l-fuculose-1-phosphate aldolase from bacteroides2 thetaiotaomicron 6 c2z7bA_ 100.0 18 PDB header:lyase Chain: A: PDB Molecule:mlr6791 protein; PDBTitle: crystal structure of mesorhizobium loti 3-hydroxy-2-methylpyridine-4,2 5-dicarboxylate decarboxylase 7 d1k0wa_ 100.0 16 Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:AraD-like aldolase/epimerase 8 c2fk5B_ 100.0 25 PDB header:lyase Chain: B: PDB Molecule:fuculose-1-phosphate aldolase; PDBTitle: crystal structure of l-fuculose-1-phosphate aldolase from thermus2 thermophilus hb8 9 c2irpA_ 100.0 17 PDB header:lyase Chain: A: PDB Molecule:putative aldolase class 2 protein aq_1979; PDBTitle: crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979)2 from aquifex aeolicus vf5 10 c3m4rA_ 100.0 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: structure of the n-terminal class ii aldolase domain of a conserved2 protein from thermoplasma acidophilum 11 d1w9ya1 61.5 8 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 12 d1gp6a_ 59.9 10 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 13 c3on7C_ 49.8 2 PDB header:oxidoreductase Chain: C: PDB Molecule:oxidoreductase, iron/ascorbate family; PDBTitle: crystal structure of a putative oxygenase (so_2589) from shewanella2 oneidensis at 2.20 a resolution 14 d1dcsa_ 48.0 10 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 15 d1odma_ 46.5 11 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 16 d1eucb2 39.1 13 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Succinyl-CoA synthetase, beta-chain, N-terminal domain 17 c2yztA_ 32.5 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative uncharacterized protein ttha1756; PDBTitle: crystal structure of uncharacterized conserved protein from thermus2 thermophilus hb8 18 d1nz8a_ 29.6 19 Fold:Ferredoxin-like Superfamily:N-utilization substance G protein NusG, N-terminal domain Family:N-utilization substance G protein NusG, N-terminal domain 19 d1gjja2 28.0 24 Fold:LEM/SAP HeH motif Superfamily:LEM domain Family:LEM domain 20 c3ooxA_ 25.8 3 PDB header:oxidoreductase Chain: A: PDB Molecule:putative 2og-fe(ii) oxygenase family protein; PDBTitle: crystal structure of a putative 2og-fe(ii) oxygenase family protein2 (cc_0200) from caulobacter crescentus at 1.44 a resolution 21 c3p45F_ not modelled 20.1 23 PDB header:hydrolase Chain: F: PDB Molecule:caspase-6; PDBTitle: crystal structure of apo-caspase-6 at physiological ph 22 d2odgc1 not modelled 19.1 31 Fold:LEM/SAP HeH motif Superfamily:LEM domain Family:LEM domain 23 d1jeia_ not modelled 18.7 24 Fold:LEM/SAP HeH motif Superfamily:LEM domain Family:LEM domain 24 d1luaa2 not modelled 17.8 11 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Methylene-tetrahydromethanopterin dehydrogenase 25 c2h51B_ not modelled 17.6 23 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-1; PDBTitle: crystal structure of human caspase-1 (glu390->asp and arg286->lys) in2 complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-3 propionylamino]-4-oxo-pentanoic acid (z-vad-fmk) 26 d2pw6a1 not modelled 17.2 15 Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like 27 c2pmzV_ not modelled 16.8 20 PDB header:translation, transferase Chain: V: PDB Molecule:dna-directed rna polymerase subunit h; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 28 d1dzfa2 not modelled 16.5 28 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 29 d1wi9a_ not modelled 16.1 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PCI domain (PINT motif) 30 c2c1eB_ not modelled 15.8 31 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-3 subunit p12; PDBTitle: crystal structures of caspase-3 in complex with aza-peptide michael2 acceptor inhibitors. 31 c2ra9A_ not modelled 15.4 23 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein duf1285; PDBTitle: crystal structure of a duf1285 family protein (sbal_2486) from2 shewanella baltica os155 at 1.40 a resolution 32 c2p2cD_ not modelled 15.0 15 PDB header:hydrolase Chain: D: PDB Molecule:caspase-2; PDBTitle: inhibition of caspase-2 by a designed ankyrin repeat2 protein (darpin) 33 c2qs0A_ not modelled 14.1 5 PDB header:biosynthetic protein Chain: A: PDB Molecule:quinolinate synthetase a; PDBTitle: quinolinate synthase from pyrococcus furiosus 34 d1hmja_ not modelled 14.0 22 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 35 c3sipB_ not modelled 14.0 31 PDB header:hydrolase/ligase/hydrolase Chain: B: PDB Molecule:caspase; PDBTitle: crystal structure of drice and diap1-bir1 complex 36 d1eika_ not modelled 13.7 17 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 37 c2c2zB_ not modelled 13.6 17 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-8 p10 subunit; PDBTitle: crystal structure of caspase-8 in complex with aza-peptide michael2 acceptor inhibitor 38 d1j5ua_ not modelled 13.4 25 Fold:MTH1598-like Superfamily:MTH1598-like Family:MTH1598-like 39 d2bfdb2 not modelled 13.4 10 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 40 d1h9fa_ not modelled 12.9 24 Fold:LEM/SAP HeH motif Superfamily:LEM domain Family:LEM domain 41 d2d6fa1 not modelled 12.7 8 Fold:Sm-like fold Superfamily:GatD N-terminal domain-like Family:GatD N-terminal domain-like 42 c3fmyA_ not modelled 12.6 17 PDB header:dna binding protein Chain: A: PDB Molecule:hth-type transcriptional regulator mqsa PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021) 43 c2qljB_ not modelled 12.4 38 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-7; PDBTitle: crystal structure of caspase-7 with inhibitor ac-wehd-cho 44 d1e0fi_ not modelled 11.3 30 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Leech antihemostatic proteins Family:Hirudin-like 45 c1e0fI_ not modelled 11.3 30 PDB header:coagulation/crystal structure/heparin-b Chain: I: PDB Molecule:haemadin; PDBTitle: crystal structure of the human alpha-thrombin-haemadin2 complex: an exosite ii-binding inhibitor 46 c3b1qD_ not modelled 11.3 26 PDB header:transferase Chain: D: PDB Molecule:ribokinase, putative; PDBTitle: structure of burkholderia thailandensis nucleoside kinase (bthnk) in2 complex with inosine 47 d1ikpa2 not modelled 11.1 27 Fold:ADP-ribosylation Superfamily:ADP-ribosylation Family:ADP-ribosylating toxins 48 c1eucB_ not modelled 11.1 17 PDB header:ligase Chain: B: PDB Molecule:succinyl-coa synthetase, beta chain; PDBTitle: crystal structure of dephosphorylated pig heart, gtp-2 specific succinyl-coa synthetase 49 d1jw3a_ not modelled 10.8 31 Fold:MTH1598-like Superfamily:MTH1598-like Family:MTH1598-like 50 d1wzua1 not modelled 10.7 0 Fold:NadA-like Superfamily:NadA-like Family:NadA-like 51 c1e0fJ_ not modelled 10.7 30 PDB header:coagulation/crystal structure/heparin-b Chain: J: PDB Molecule:haemadin; PDBTitle: crystal structure of the human alpha-thrombin-haemadin2 complex: an exosite ii-binding inhibitor 52 d1m1ha2 not modelled 10.7 22 Fold:Ferredoxin-like Superfamily:N-utilization substance G protein NusG, N-terminal domain Family:N-utilization substance G protein NusG, N-terminal domain 53 c3r1fO_ not modelled 10.7 16 PDB header:transcription Chain: O: PDB Molecule:esx-1 secretion-associated regulator espr; PDBTitle: crystal structure of a key regulator of virulence in mycobacterium2 tuberculosis 54 c3kv4A_ not modelled 10.5 4 PDB header:h3k4me3 binding protein, transferase Chain: A: PDB Molecule:phd finger protein 8; PDBTitle: structure of phf8 in complex with histone h3 55 c3s6bA_ not modelled 10.4 26 PDB header:hydrolase Chain: A: PDB Molecule:methionine aminopeptidase; PDBTitle: crystal structure of methionine aminopeptidase 1b from plasmodium2 falciparum, pf10_0150 56 d1dwka1 not modelled 10.4 9 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Cyanase N-terminal domain 57 d2nu7b2 not modelled 10.2 9 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Succinyl-CoA synthetase, beta-chain, N-terminal domain 58 d1ig4a_ not modelled 10.2 9 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD 59 d1kx5b_ not modelled 10.0 18 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 60 d1gvfa_ not modelled 9.9 11 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase 61 d1alna1 not modelled 9.6 29 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 62 d1qk9a_ not modelled 9.5 13 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD 63 c2nu9E_ not modelled 9.4 11 PDB header:ligase Chain: E: PDB Molecule:succinyl-coa synthetase beta chain; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase2 orthorhombic crystal form 64 d1w85b2 not modelled 9.3 18 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 65 c1e0fK_ not modelled 9.1 30 PDB header:coagulation/crystal structure/heparin-b Chain: K: PDB Molecule:haemadin; PDBTitle: crystal structure of the human alpha-thrombin-haemadin2 complex: an exosite ii-binding inhibitor 66 d1u5tb1 not modelled 8.9 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 67 c3pvjB_ not modelled 8.6 10 PDB header:oxidoreductase Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase; PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent taurine2 dioxygenase from pseudomonas putida kt2440 68 c2ky8A_ not modelled 8.6 23 PDB header:transcription/dna Chain: A: PDB Molecule:methyl-cpg-binding domain protein 2; PDBTitle: solution structure and dynamic analysis of chicken mbd2 methyl binding2 domain bound to a target methylated dna sequence 69 c2z5wA_ not modelled 8.5 18 PDB header:structural protein Chain: A: PDB Molecule:bcla protein; PDBTitle: tbcla, a recombinant spore surface protein from bacillus anthracis 70 c3h02F_ not modelled 8.5 12 PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium. 71 d1zq1c2 not modelled 8.2 22 Fold:DCoH-like Superfamily:GAD domain-like Family:GAD domain 72 c3ju3A_ not modelled 8.2 6 PDB header:oxidoreductase Chain: A: PDB Molecule:probable 2-oxoacid ferredoxin oxidoreductase, alpha chain; PDBTitle: crystal structure of alpha chain of probable 2-oxoacid ferredoxin2 oxidoreductase from thermoplasma acidophilum 73 c3ox4D_ not modelled 8.0 12 PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 2; PDBTitle: structures of iron-dependent alcohol dehydrogenase 2 from zymomonas2 mobilis zm4 complexed with nad cofactor 74 d2a6aa2 not modelled 7.9 33 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:YeaZ-like 75 d1ub1a_ not modelled 7.9 22 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD 76 d1rrma_ not modelled 7.8 18 Fold:Dehydroquinate synthase-like Superfamily:Dehydroquinate synthase-like Family:Iron-containing alcohol dehydrogenase 77 d1uasa1 not modelled 7.8 19 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 78 d1o2da_ not modelled 7.5 12 Fold:Dehydroquinate synthase-like Superfamily:Dehydroquinate synthase-like Family:Iron-containing alcohol dehydrogenase 79 d1a9xa5 not modelled 7.3 25 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like 80 d2huec1 not modelled 7.3 19 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 81 c3q94B_ not modelled 7.2 14 PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase, class ii; PDBTitle: the crystal structure of fructose 1,6-bisphosphate aldolase from2 bacillus anthracis str. 'ames ancestor' 82 d1rvga_ not modelled 7.0 8 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase 83 d2d6fc2 not modelled 6.9 22 Fold:DCoH-like Superfamily:GAD domain-like Family:GAD domain 84 c1v8gB_ not modelled 6.6 11 PDB header:transferase Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase; PDBTitle: crystal structure of anthranilate phosphoribosyltransferase2 (trpd) from thermus thermophilus hb8 85 c1wckA_ not modelled 6.6 18 PDB header:structural protein Chain: A: PDB Molecule:bcla protein; PDBTitle: crystal structure of the c-terminal domain of bcla, the2 major antigen of the exosporium of the bacillus anthracis3 spore. 86 c3p04A_ not modelled 6.6 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 87 c1w7vD_ not modelled 6.5 25 PDB header:hydrolase Chain: D: PDB Molecule:xaa-pro aminopeptidase; PDBTitle: znmg substituted aminopeptidase p from e. coli 88 c3a1yF_ not modelled 6.5 20 PDB header:ribosomal protein Chain: F: PDB Molecule:50s ribosomal protein p1 (l12p); PDBTitle: the structure of protein complex 89 c1olsB_ not modelled 6.4 10 PDB header:oxidoreductase Chain: B: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit; PDBTitle: roles of his291-alpha and his146-beta' in the reductive2 acylation reaction catalyzed by human branched-chain3 alpha-ketoacid dehydrogenase 90 c3p04B_ not modelled 6.3 14 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 91 d1hzda_ not modelled 6.2 20 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 92 c3h0gE_ not modelled 6.1 20 PDB header:transcription Chain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe 93 c3q2oB_ not modelled 6.0 10 PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of purk: n5-carboxyaminoimidazole ribonucleotide2 synthetase 94 d1hj3a1 not modelled 5.8 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 95 d1b4ub_ not modelled 5.8 13 Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like 96 c2qlcC_ not modelled 5.7 10 PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein radc homolog; PDBTitle: the crystal structure of dna repair protein radc from chlorobium2 tepidum tls 97 d2d69a1 not modelled 5.6 16 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 98 c3bfjK_ not modelled 5.5 12 PDB header:oxidoreductase Chain: K: PDB Molecule:1,3-propanediol oxidoreductase; PDBTitle: crystal structure analysis of 1,3-propanediol oxidoreductase 99 c2k06A_ not modelled 5.4 28 PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of the aminoterminal domain of e. coli2 nusg