PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3m4rA_

Fold library id	PDB Header	Molecule	Title
c3m4rA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: uncharacterized protein;	PDBTitle: structure of the n-terminal class ii aldolase domain of a2 conserved protein from thermoplasma acidophilum

Links to external resources
Added to library: Sat Aug 28 18:35:05 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X Q N R W A E T K F D S D I D E V V Y G S R L I G S D P D L V L G G G N T S V K T T E R D H A G R I I S V L R V K N S G S N L G T I D S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
T T T
T T S
B T T S
G G G
G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G F T G I R X D D A L A A A K I D K X T D E A X V D Y L K K S X V N P S E P S P S V E T F L H A F L P Y K F V X H S H A D A I L S I T N T D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G
S
T B S S T T S
B
T T T S
S S
T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L P S D Q I A K I L G N V V V L P Y I P P G F T L A K E V X N C F K K G I D G I V L R K H G L L T F G D T G K E A Y D R H I N I V S R A E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T
S T T T S S

. . .

Sequence F I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	Q	N	R	W	A	E	T	K	F	D	S	D	I	D	E	V	V	Y	G	S	R	L	I	G	S	D	P	D	L	V	L	G	G	G	N	T	S	V	K	T	T	E	R	D	H	A	G	R	I	I	S	V	L	R	V	K	N	S	G	S	N	L	G	T	I	D	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S														T		T	T	T																T	T	S										B	T	T	S		G	G	G			G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	F	T	G	I	R	X	D	D	A	L	A	A	A	K	I	D	K	X	T	D	E	A	X	V	D	Y	L	K	K	S	X	V	N	P	S	E	P	S	P	S	V	E	T	F	L	H	A	F	L	P	Y	K	F	V	X	H	S	H	A	D	A	I	L	S	I	T	N	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G												G	G	G		S														T	B	S	S	T	T	S			B		T	T						T	S		S	S															T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	P	S	D	Q	I	A	K	I	L	G	N	V	V	V	L	P	Y	I	P	P	G	F	T	L	A	K	E	V	X	N	C	F	K	K	G	I	D	G	I	V	L	R	K	H	G	L	L	T	F	G	D	T	G	K	E	A	Y	D	R	H	I	N	I	V	S	R	A	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S									S	S													T	T		S					T	T	T							S	S
	.	.	.
Sequence	F	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)