Email l.a.kelley@imperial.ac.uk Description P0A937 Date Thu Jan 5 11:09:18 GMT 2012 Unique Job ID dbdbe68d2b9b75d4

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2kxxA_ 100.0 97 PDB header:protein binding Chain: A: PDB Molecule:small protein a; PDBTitle: nmr structure of escherichia coli bame, a lipoprotein component of the2 beta-barrel assembly machinery complex 2 c2pxgA_ 99.9 30 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein; PDBTitle: nmr solution structure of omla 3 c3d4eA_ 97.8 18 PDB header:hydrolase Chain: A: PDB Molecule:putative beta-lactamase inhibitor protein; PDBTitle: crystal structure of putative beta-lactamase inhibitor protein2 (np_721579.1) from streptococcus mutans at 1.40 a resolution 4 d2g2ub1 97.0 21 Fold:BLIP-like Superfamily:beta-lactamase-inhibitor protein, BLIP Family:beta-lactamase-inhibitor protein, BLIP 5 c3gmvX_ 88.6 30 PDB header:protein binding Chain: X: PDB Molecule:beta-lactamase inhibitory protein blip-i; PDBTitle: crystal structure of beta-lactamse inhibitory protein-i2 (blip-i) in apo form 6 c3gmxB_ 88.3 21 PDB header:protein binding Chain: B: PDB Molecule:blp; PDBTitle: crystal structure of beta-lactamse inhibitory protein-like2 protein (blp) at 1.05 angstrom resolution 7 d1uw4a_ 54.9 14 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Smg-4/UPF3 8 c2o1uA_ 37.7 38 PDB header:chaperone Chain: A: PDB Molecule:endoplasmin; PDBTitle: structure of full length grp94 with amp-pnp bound 9 c3fmyA_ 23.2 21 PDB header:dna binding protein Chain: A: PDB Molecule:hth-type transcriptional regulator mqsa PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021) 10 c2vgpD_ 19.7 17 PDB header:transferase Chain: D: PDB Molecule:inner centromere protein a; PDBTitle: crystal structure of aurora b kinase in complex with a2 aminothiazole inhibitor 11 d2cwqa1 19.2 17 Fold:AhpD-like Superfamily:AhpD-like Family:TTHA0727-like 12 c2qeuA_ 18.3 7 PDB header:lyase Chain: A: PDB Molecule:putative carboxymuconolactone decarboxylase; PDBTitle: crystal structure of putative carboxymuconolactone decarboxylase2 (yp_555818.1) from burkholderia xenovorans lb400 at 1.65 a resolution 13 c1vliA_ 17.8 15 PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution 14 d1vqop1 17.0 11 Fold:Ribosomal protein L19 (L19e) Superfamily:Ribosomal protein L19 (L19e) Family:Ribosomal protein L19 (L19e) 15 d2qqra1 17.0 22 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain 16 c2wwaJ_ 16.8 17 PDB header:ribosome Chain: J: PDB Molecule:60s ribosomal protein l19; PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the2 yeast 80s ribosome 17 c2cg9A_ 16.6 35 PDB header:chaperone Chain: A: PDB Molecule:atp-dependent molecular chaperone hsp82; PDBTitle: crystal structure of an hsp90-sba1 closed chaperone complex 18 c4a1cO_ 16.0 17 PDB header:ribosome Chain: O: PDB Molecule:rpl19; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4. 19 d2af7a1 15.6 15 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 20 c3gn5B_ 15.2 19 PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021) 21 c2rfuA_ not modelled 15.1 21 PDB header:viral protein Chain: A: PDB Molecule:influenza b hemagglutinin (ha); PDBTitle: crystal structure of influenza b virus hemagglutinin in complex with2 lstc receptor analog 22 d1g3nc2 not modelled 14.6 27 Fold:Cyclin-like Superfamily:Cyclin-like Family:Cyclin 23 c2kfsA_ not modelled 14.2 13 PDB header:dna-binding protein Chain: A: PDB Molecule:conserved hypothetical regulatory protein; PDBTitle: nmr structure of rv2175c 24 c1q40C_ not modelled 13.4 23 PDB header:translation Chain: C: PDB Molecule:mrna transport regulator mtr2; PDBTitle: crystal structure of the c. albicans mtr2-mex67 m domain complex 25 d1vlia1 not modelled 13.3 15 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 26 c2zkrp_ not modelled 12.8 19 PDB header:ribosomal protein/rna Chain: P: PDB Molecule:rna expansion segment es31 part i; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 27 d1q42a_ not modelled 12.4 23 Fold:Cystatin-like Superfamily:NTF2-like Family:NTF2-like 28 c3qqiB_ not modelled 11.9 26 PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin; PDBTitle: crystal structure of the ha1 receptor binding domain of h22 hemagglutinin 29 c3mlhA_ not modelled 11.7 26 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin; PDBTitle: crystal structure of the 2009 h1n1 influenza virus hemagglutinin2 receptor-binding domain 30 d1jsda_ not modelled 11.7 26 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 31 d2visc_ not modelled 11.7 39 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 32 d1rd8a_ not modelled 11.6 26 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 33 c2iopD_ not modelled 11.3 47 PDB header:chaperone Chain: D: PDB Molecule:chaperone protein htpg; PDBTitle: crystal structure of full-length htpg, the escherichia coli2 hsp90, bound to adp 34 c3iz5T_ not modelled 11.1 19 PDB header:ribosome Chain: T: PDB Molecule:60s ribosomal protein l19 (l19e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 35 d2zdra1 not modelled 11.0 22 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 36 c3eykA_ not modelled 10.7 39 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin ha1 chain; PDBTitle: structure of influenza haemagglutinin in complex with an2 inhibitor of membrane fusion 37 d1ijwc_ not modelled 10.7 30 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 38 d2ofya1 not modelled 10.5 20 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 39 d1rvxa_ not modelled 10.3 26 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 40 d1rv0h_ not modelled 10.3 26 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 41 d2ibxa1 not modelled 10.1 17 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 42 d1mqma_ not modelled 10.0 39 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 43 d2viua_ not modelled 10.0 39 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 44 d1hcra_ not modelled 9.4 30 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 45 d1jmca1 not modelled 9.2 13 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 46 c1p8cD_ not modelled 9.2 20 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of tm1620 (apc4843) from thermotoga2 maritima 47 c3i71B_ not modelled 9.0 36 PDB header:unknown function Chain: B: PDB Molecule:ethanolamine utilization protein eutk; PDBTitle: ethanolamine utilization microcompartment shell subunit, eutk c-2 terminal domain 48 c2ivfA_ not modelled 8.8 6 PDB header:oxidoreductase Chain: A: PDB Molecule:ethylbenzene dehydrogenase alpha-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum 49 d1jsma_ not modelled 8.8 21 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 50 c2o1wB_ not modelled 8.8 50 PDB header:chaperone Chain: B: PDB Molecule:endoplasmin; PDBTitle: structure of n-terminal plus middle domains (n+m) of grp94 51 d1zbra1 not modelled 8.6 19 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase 52 c2wr2B_ not modelled 8.5 26 PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin; PDBTitle: structure of influenza h2 avian hemagglutinin with avian2 receptor 53 d1vkea_ not modelled 8.1 20 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 54 c2ppxA_ not modelled 8.0 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1735; PDBTitle: crystal structure of a hth xre-family like protein from agrobacterium2 tumefaciens 55 d2ppxa1 not modelled 8.0 21 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 56 d2hqva1 not modelled 8.0 11 Fold:Heme iron utilization protein-like Superfamily:Heme iron utilization protein-like Family:ChuX-like 57 d1dwma_ not modelled 7.9 27 Fold:CI-2 family of serine protease inhibitors Superfamily:CI-2 family of serine protease inhibitors Family:CI-2 family of serine protease inhibitors 58 d1nr3a_ not modelled 7.9 33 Fold:DNA-binding protein Tfx Superfamily:DNA-binding protein Tfx Family:DNA-binding protein Tfx 59 c3rdyA_ not modelled 7.9 9 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:bwi-1=protease inhibitor/trypsin inhibitor; PDBTitle: crystal structure of buckwheat trypsin inhibitor rbti at 1.84 angstrom2 resolution 60 d1bw6a_ not modelled 7.6 8 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding 61 c3ct5A_ not modelled 7.4 21 PDB header:hydrolase Chain: A: PDB Molecule:morphogenesis protein 1; PDBTitle: crystal and cryoem structural studies of a cell wall degrading enzyme2 in the bacteriophage phi29 tail 62 d1yqga1 not modelled 7.2 16 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:ProC C-terminal domain-like 63 d2v9va2 not modelled 7.1 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal fragment of elongation factor SelB 64 c3beyC_ not modelled 7.1 19 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:conserved protein o27018; PDBTitle: crystal structure of the protein o27018 from methanobacterium2 thermoautotrophicum. northeast structural genomics consortium target3 tt217 65 d1iiea_ not modelled 7.0 33 Fold:Class II MHC-associated invariant chain ectoplasmic trimerization domain Superfamily:Class II MHC-associated invariant chain ectoplasmic trimerization domain Family:Class II MHC-associated invariant chain ectoplasmic trimerization domain 66 c2ci2I_ not modelled 6.9 5 PDB header:proteinase inhibitor (chymotrypsin) Chain: I: PDB Molecule:chymotrypsin inhibitor 2; PDBTitle: crystal and molecular structure of the serine proteinase2 inhibitor ci-2 from barley seeds 67 d2snii_ not modelled 6.9 5 Fold:CI-2 family of serine protease inhibitors Superfamily:CI-2 family of serine protease inhibitors Family:CI-2 family of serine protease inhibitors 68 d1ypci_ not modelled 6.8 5 Fold:CI-2 family of serine protease inhibitors Superfamily:CI-2 family of serine protease inhibitors Family:CI-2 family of serine protease inhibitors 69 d1to2i_ not modelled 6.8 5 Fold:CI-2 family of serine protease inhibitors Superfamily:CI-2 family of serine protease inhibitors Family:CI-2 family of serine protease inhibitors 70 c2hl7A_ not modelled 6.7 6 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccmh; PDBTitle: crystal structure of the periplasmic domain of ccmh from pseudomonas2 aeruginosa 71 c1ha0A_ not modelled 6.5 39 PDB header:viral protein Chain: A: PDB Molecule:protein (hemagglutinin precursor); PDBTitle: hemagglutinin precursor ha0 72 d2j0pa1 not modelled 6.2 14 Fold:Heme iron utilization protein-like Superfamily:Heme iron utilization protein-like Family:HemS/ChuS-like 73 d1j8ba_ not modelled 6.1 30 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 74 d1k25a2 not modelled 6.1 8 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 75 c1tinA_ not modelled 6.0 13 PDB header:serine protease inhibitor Chain: A: PDB Molecule:trypsin inhibitor v; PDBTitle: three-dimensional structure in solution of cucurbita maxima2 trypsin inhibitor-v determined by nmr spectroscopy 76 c1y4sA_ not modelled 6.0 57 PDB header:chaperone Chain: A: PDB Molecule:chaperone protein htpg; PDBTitle: conformation rearrangement of heat shock protein 90 upon2 adp binding 77 c2kw0A_ not modelled 6.0 6 PDB header:oxidoreductase Chain: A: PDB Molecule:ccmh protein; PDBTitle: solution structure of n-terminal domain of ccmh from escherichia.coli 78 c3f6wE_ not modelled 5.9 50 PDB header:dna binding protein Chain: E: PDB Molecule:xre-family like protein; PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000 79 c1vbwA_ not modelled 5.9 7 PDB header:protein binding Chain: A: PDB Molecule:trypsin inhibitor bgit; PDBTitle: crystal structure of bitter gourd trypsin inhibitor 80 d2ahra1 not modelled 5.7 16 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:ProC C-terminal domain-like 81 d2ovra1 not modelled 5.7 14 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 82 c3pehB_ not modelled 5.6 43 PDB header:chaperone Chain: B: PDB Molecule:endoplasmin homolog; PDBTitle: crystal structure of the n-terminal domain of an hsp90 from plasmodium2 falciparum, pfl1070c in the presence of a thienopyrimidine derivative 83 c2eblA_ not modelled 5.5 36 PDB header:transcription Chain: A: PDB Molecule:coup transcription factor 1; PDBTitle: solution structure of the zinc finger, c4-type domain of2 human coup transcription factor 1 84 d1pugb_ not modelled 5.5 20 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 85 c2xsdC_ not modelled 5.5 42 PDB header:transcription/dna Chain: C: PDB Molecule:pou domain, class 3, transcription factor 1; PDBTitle: crystal structure of the dimeric oct-6 (pou3f1) pou domain2 bound to palindromic more dna 86 d1vkeb_ not modelled 5.5 20 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 87 d1fs2b1 not modelled 5.4 14 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 88 d1okga3 not modelled 5.4 28 Fold:FKBP-like Superfamily:FKBP-like Family:3-mercaptopyruvate sulfurtransferase, C-terminal domain 89 d2cmua1 not modelled 5.3 19 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase 90 c2wstE_ not modelled 5.1 27 PDB header:viral protein Chain: E: PDB Molecule:putative fiber protein; PDBTitle: head domain of porcine adenovirus type 4 nadc-1 isolate2 fibre 91 c2qzbB_ not modelled 5.1 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein yfey; PDBTitle: crystal structure of the uncharacterized protein yfey from escherichia2 coli 92 d3dxoa1 not modelled 5.1 16 Fold:Cystatin-like Superfamily:NTF2-like Family:Atu0744-like 93 c3fldA_ not modelled 5.1 29 PDB header:hydrolase Chain: A: PDB Molecule:protein trai; PDBTitle: crystal structure of the trai c-terminal domain 94 c3fljA_ not modelled 5.1 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein conserved in bacteria with a PDBTitle: crystal structure of uncharacterized protein conserved in bacteria2 with a cystatin-like fold (yp_168589.1) from silicibacter pomeroyi3 dss-3 at 2.00 a resolution 95 d2hanb1 not modelled 5.1 36 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 96 c3cpnA_ not modelled 5.0 13 PDB header:hydrolase Chain: A: PDB Molecule:beta-xylosidase, family 43 glycosyl hydrolase; PDBTitle: crystal structure of beta-xylosidase, family 43 glycosyl2 hydrolase from clostridium acetobutylicum