PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zkrp_

Fold library id	PDB Header	Molecule	Title
c2zkrp_	PDB header: ribosomal protein/rna	Chain: P: PDB Molecule: rna expansion segment es31 part i;	PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map

Links to external resources
Added to library: Tue Mar 16 12:57:18 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R L A S S V L R C G K K K V W L D P N E T N E I A N A N S R Q Q I R K L I K D G L I I R K P V T V S R A R C R K N T L A R R K G R H M G T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
G G G
S T T
S T S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N A R M P E K V T W M R R M R I L R R L L R R Y R E S K K I D R H M Y H S L Y L K V K G N D K A R K K L L A D Q A E A R R S K T K E A R K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S S
T
T T T

. . . . . . . . . 150 . . . . . . . . .

Sequence R E E R L Q A K K E E I I K T L S K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	L	A	S	S	V	L	R	C	G	K	K	K	V	W	L	D	P	N	E	T	N	E	I	A	N	A	N	S	R	Q	Q	I	R	K	L	I	K	D	G	L	I	I	R	K	P	V	T	V	S	R	A	R	C	R	K	N	T	L	A	R	R	K	G	R	H	M	G	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S		G	G	G					S	T	T									S											T	S																							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	A	R	M	P	E	K	V	T	W	M	R	R	M	R	I	L	R	R	L	L	R	R	Y	R	E	S	K	K	I	D	R	H	M	Y	H	S	L	Y	L	K	V	K	G	N	D	K	A	R	K	K	L	L	A	D	Q	A	E	A	R	R	S	K	T	K	E	A	R	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																							T	T	S	S														T																		T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Sequence	R	E	E	R	L	Q	A	K	K	E	E	I	I	K	T	L	S	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T