Fold library entry viewer: c2iopD_

Added to library: Tue Mar 16 11:59:47 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	G	Q	E	T	R	G	F	Q	S	E	V	K	Q	L	L	H	L	M	I	H	S	L	Y	S	N	K	E	I	F	L	R	E	L	I	S	N	A	S	D	A	A	D	K	L	R	F	R	A	L	S	N	P	D	L	Y	E	G	D	G	E	L	R	V	R	V	S	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								G	G	G	G	T	T																						S	S	S	G	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	D	K	R	T	L	T	I	S	D	N	G	V	G	M	T	R	D	E	V	I	D	H	L	G	T	I	A	K	S	G	T	K	S	F	L	E	S	L	G	S	D	Q	A	K	D	S	Q	L	I	G	Q	F	G	V	G	F	Y	S	A	F	I	V	A	D	K	V	T	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T								S											T	T	T	S													T	T	S	T	T	G	G	G	S	S	T	T	T	T					G	G	G	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	R	A	A	G	E	K	P	E	N	G	V	F	W	E	S	A	G	E	G	E	Y	T	V	A	D	I	T	K	E	D	R	G	T	E	I	T	L	H	L	R	E	G	E	D	E	F	L	D	D	W	R	V	R	S	I	I	S	K	Y	S	D	H	I	A	L	P	V	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S		G	G	G								S	S	S										S	S											T	T		G	G	G	G													T	T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	K	R	E	E	K	D	T	V	I	S	W	E	K	I	N	K	A	Q	A	L	W	T	R	N	K	S	E	I	T	D	E	E	Y	K	E	F	Y	K	H	I	A	H	D	F	N	D	P	L	T	W	S	H	N	R	V	E	G	K	Q	E	Y	T	S	L	L	Y	I	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S						T	T	T	S		T	T	T													T	T	T			S			S									S	S	S										S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	A	P	W	D	M	W	N	R	H	K	H	G	L	K	L	Y	V	Q	R	V	F	I	M	D	D	A	E	Q	F	M	P	N	Y	L	R	F	V	R	G	L	I	D	S	S	D	L	P	L	N	V	S	R	E	I	L	Q	D	S	T	V	T	R	N	L	R	N	A	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S	G	G	G						S						S	S	S							T	T	S	S		G	G	G	T	T								S	S	S		T	T									S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	R	V	L	Q	M	L	E	K	L	A	K	D	D	A	E	K	Y	Q	T	F	W	Q	Q	F	G	L	V	L	K	E	G	P	A	E	D	F	A	N	Q	E	A	I	A	K	L	L	R	F	A	S	T	H	T	D	S	S	A	Q	T	V	S	L	E	D	Y	V	S	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														T	T						G	G	G										B			T	T			S	S	S			B								T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	E	G	Q	E	K	I	Y	Y	I	T	A	D	S	Y	A	A	A	K	S	S	P	H	L	E	L	L	R	K	K	G	I	E	V	L	L	L	S	D	R	I	D	E	W	M	M	N	Y	L	T	E	F	D	G	K	P	F	Q	S	V	S	K	V	D	E	S	L	E	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T										S	S						T		G	G	G							T								S	T	T					T	T	T					T	T						T	T	S			S	S	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	I	D	R	V	K	A	L	L	G	E	R	V	K	D	V	R	L	T	H	R	L	T	D	T	P	A	I	V	S	T	D	A	D	E	M	S	T	Q	M	A	K	L	F	A	A	A	G	Q	K	V	P	E	V	K	Y	I	F	E	L	N	P	D	H	V	L	V	K	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S	S									S	S									T	T													T	T	S													T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Sequence	A	D	T	E	D	E	A	K	F	S	E	W	V	E	L	L	L	D	Q	A	L	L	A	E	R	G	T	L	E	D	P	N	L	F	I	R	R	M	N	Q	L	L	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	S	S		S

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PDB structure

FASTA sequence

Hidden Markov model

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