Email l.a.kelley@imperial.ac.uk Description P0A8M6 Date Thu Jan 5 11:08:12 GMT 2012 Unique Job ID db926c48403ea790

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2gsva1 52.5 22 Fold:Open three-helical up-and-down bundle Superfamily:YvfG-like Family:YvfG-like 2 c3kheB_ 21.0 19 PDB header:metal binding protein Chain: B: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-loaded calmodulin-like domain of the2 cdpk, 541.m00134 from toxoplasma gondii 3 c2fvhB_ 20.8 14 PDB header:hydrolase Chain: B: PDB Molecule:urease gamma subunit; PDBTitle: crystal structure of rv1848, a urease gamma subunit urea (urea2 amidohydrolase), from mycobacterium tuberculosis 4 d1e7la2 20.2 27 Fold:His-Me finger endonucleases Superfamily:His-Me finger endonucleases Family:Recombination endonuclease VII, N-terminal domain 5 d4ubpa_ 19.6 11 Fold:Urease, gamma-subunit Superfamily:Urease, gamma-subunit Family:Urease, gamma-subunit 6 d1ejxa_ 19.0 21 Fold:Urease, gamma-subunit Superfamily:Urease, gamma-subunit Family:Urease, gamma-subunit 7 c1ztaA_ 16.2 41 PDB header:dna-binding motif Chain: A: PDB Molecule:leucine zipper monomer; PDBTitle: the solution structure of a leucine-zipper motif peptide 8 c2f8mB_ 15.8 18 PDB header:isomerase Chain: B: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: ribose 5-phosphate isomerase from plasmodium falciparum 9 c1zdbA_ 15.8 28 PDB header:igg binding domain Chain: A: PDB Molecule:mini protein a domain, z38; PDBTitle: phage-selected mini protein a domain, z38, nmr, minimized2 mean structure 10 d1r8ja1 14.1 20 Fold:KaiA/RbsU domain Superfamily:KaiA/RbsU domain Family:Circadian clock protein KaiA, C-terminal domain 11 d1sv1a_ 13.7 20 Fold:KaiA/RbsU domain Superfamily:KaiA/RbsU domain Family:Circadian clock protein KaiA, C-terminal domain 12 c3l19B_ 13.1 29 PDB header:transferase Chain: B: PDB Molecule:calcium/calmodulin dependent protein kinase with a kinase PDBTitle: crystal structure of calcium binding domain of cpcdpk3, cgd5_820 13 c2vz4A_ 12.4 8 PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional activator tipa; PDBTitle: the n-terminal domain of merr-like protein tipal bound to2 promoter dna 14 c1y2iC_ 12.0 18 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein s0862; PDBTitle: crystal structure of mcsg target apc27401 from shigella2 flexneri 15 d1y2ia_ 12.0 18 Fold:Dodecin subunit-like Superfamily:YbjQ-like Family:YbjQ-like 16 d1oeyj_ 11.9 33 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain 17 c1nvpB_ 11.8 21 PDB header:transcription/dna Chain: B: PDB Molecule:transcription initiation factor iia alpha chain; PDBTitle: human tfiia/tbp/dna complex 18 d1nvpb_ 11.8 21 Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain 19 c1ce0B_ 11.0 29 PDB header:hiv-1 envelope protein Chain: B: PDB Molecule:protein (leucine zipper model h38-p1); PDBTitle: trimerization specificity in hiv-1 gp41: analysis with a2 gcn4 leucine zipper model 20 c3mejA_ 10.8 18 PDB header:transcriptional regulator Chain: A: PDB Molecule:transcriptional regulator ywtf; PDBTitle: crystal structure of putative transcriptional regulator ywtf from2 bacillus subtilis, northeast structural genomics consortium target3 sr736 21 c2oqqB_ not modelled 10.7 50 PDB header:transcription Chain: B: PDB Molecule:transcription factor hy5; PDBTitle: crystal structure of hy5 leucine zipper homodimer from2 arabidopsis thaliana 22 d2gr7a1 not modelled 10.6 23 Fold:Pili subunits Superfamily:Pili subunits Family:YadA C-terminal domain-like 23 c2gr7C_ not modelled 10.6 23 PDB header:membrane protein Chain: C: PDB Molecule:adhesin; PDBTitle: hia 992-1098 24 c3hh0C_ not modelled 10.5 23 PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator, merr family; PDBTitle: crystal strucure of a transcriptional regulator, merr family2 from bacillus cereus 25 d1v8ga1 not modelled 10.5 19 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 26 d1nh2b_ not modelled 10.2 14 Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain 27 c2jd3B_ not modelled 10.1 14 PDB header:dna binding protein Chain: B: PDB Molecule:stbb protein; PDBTitle: parr from plasmid pb171 28 d1edla_ not modelled 10.0 33 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 29 c3kltB_ not modelled 9.9 13 PDB header:structural protein Chain: B: PDB Molecule:vimentin; PDBTitle: crystal structure of a vimentin fragment 30 d1u2ca2 not modelled 8.9 17 Fold:Dystroglycan, domain 2 Superfamily:Dystroglycan, domain 2 Family:Dystroglycan, domain 2 31 c2bcxB_ not modelled 8.6 63 PDB header:calcium binding protein Chain: B: PDB Molecule:ryanodine receptor 1; PDBTitle: crystal structure of calmodulin in complex with a ryanodine2 receptor peptide 32 c2o7hF_ not modelled 8.5 35 PDB header:transcription Chain: F: PDB Molecule:general control protein gcn4; PDBTitle: crystal structure of trimeric coiled coil gcn4 leucine zipper 33 c1ij2C_ not modelled 8.4 35 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 34 c3k7zB_ not modelled 8.4 35 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 35 c3k7zA_ not modelled 8.4 35 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 36 c1rb6C_ not modelled 8.4 35 PDB header:dna binding protein Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal form 37 c1swiA_ not modelled 8.4 35 PDB header:leucine zipper Chain: A: PDB Molecule:gcn4p1; PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with2 benzene 38 c1rb1A_ not modelled 8.4 35 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 39 c1rb1B_ not modelled 8.4 35 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 40 c1ij3B_ not modelled 8.4 35 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position 41 c1ij3C_ not modelled 8.4 35 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position 42 c3cvfA_ not modelled 8.2 32 PDB header:signaling protein Chain: A: PDB Molecule:homer protein homolog 3; PDBTitle: crystal structure of the carboxy terminus of homer3 43 c3qfiA_ not modelled 8.0 13 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: x-ray crystal structure of transcriptional regulator (ef0465) from2 enterococcus faecalis, northeast structural genomics consortium3 target efr190 44 d1fc2c_ not modelled 7.6 39 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 45 c2pxgA_ not modelled 7.5 13 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein; PDBTitle: nmr solution structure of omla 46 c1ij2B_ not modelled 7.4 35 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 47 d1vr4a1 not modelled 7.3 20 Fold:Dodecin subunit-like Superfamily:YbjQ-like Family:YbjQ-like 48 c1uixA_ not modelled 7.3 37 PDB header:transferase Chain: A: PDB Molecule:rho-associated kinase; PDBTitle: coiled-coil structure of the rhoa-binding domain in rho-2 kinase 49 c1xtzA_ not modelled 7.2 9 PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase; PDBTitle: crystal structure of the s. cerevisiae d-ribose-5-phosphate isomerase:2 comparison with the archeal and bacterial enzymes 50 d1lp1a_ not modelled 7.1 22 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 51 c2a45J_ not modelled 7.1 20 PDB header:hydrolase/hydrolase inhibitor Chain: J: PDB Molecule:fibrinogen alpha chain; PDBTitle: crystal structure of the complex between thrombin and the central "e"2 region of fibrin 52 c1b6aA_ not modelled 6.9 25 PDB header:angiogenesis inhibitor Chain: A: PDB Molecule:methionine aminopeptidase; PDBTitle: human methionine aminopeptidase 2 complexed with tnp-470 53 c1e9zA_ not modelled 6.8 11 PDB header:hydrolase Chain: A: PDB Molecule:urease subunit alpha; PDBTitle: crystal structure of helicobacter pylori urease 54 d1e9ya2 not modelled 6.8 11 Fold:Urease, gamma-subunit Superfamily:Urease, gamma-subunit Family:Urease, gamma-subunit 55 c3okzB_ not modelled 6.7 21 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative uncharacterized protein gbs0355; PDBTitle: crystal structure of protein gbs0355 from streptococcus agalactiae,2 northeast structural genomics consortium target sar127 56 d2etda1 not modelled 6.6 27 Fold:Bromodomain-like Superfamily:LemA-like Family:LemA-like 57 d1deeg_ not modelled 6.3 33 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 58 c2juiA_ not modelled 6.0 46 PDB header:toxin Chain: A: PDB Molecule:plne; PDBTitle: three-dimensional structure of the two peptides that2 constitute the two-peptide bacteriocin plantaracin ef 59 d1jfib_ not modelled 5.9 24 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 60 c1jfiB_ not modelled 5.9 24 PDB header:transcription/dna Chain: B: PDB Molecule:transcription regulator nc2 beta chain; PDBTitle: crystal structure of the nc2-tbp-dna ternary complex 61 d2jwda1 not modelled 5.9 39 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 62 d1lp1b_ not modelled 5.5 33 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 63 c1m25A_ not modelled 5.5 100 PDB header:unknown function Chain: A: PDB Molecule:major prion protein; PDBTitle: structure of synthetic 26-mer peptide containing 145-1692 sheep prion protein segment and c-terminal cysteine in tfe3 solution 64 c1r8jB_ not modelled 5.5 20 PDB header:circadian clock protein Chain: B: PDB Molecule:kaia; PDBTitle: crystal structure of circadian clock protein kaia from2 synechococcus elongatus 65 c3cveC_ not modelled 5.4 18 PDB header:signaling protein Chain: C: PDB Molecule:homer protein homolog 1; PDBTitle: crystal structure of the carboxy terminus of homer1 66 c3qgaD_ not modelled 5.4 16 PDB header:hydrolase Chain: D: PDB Molecule:fusion of urease beta and gamma subunits; PDBTitle: 3.0 a model of iron containing urease urea2b2 from helicobacter2 mustelae 67 d2a3qa1 not modelled 5.2 20 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 68 c2q4pA_ not modelled 5.2 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein rs21-c6; PDBTitle: ensemble refinement of the crystal structure of protein from mus2 musculus mm.29898 69 d1v2za_ not modelled 5.2 20 Fold:KaiA/RbsU domain Superfamily:KaiA/RbsU domain Family:Circadian clock protein KaiA, C-terminal domain 70 c3jzaB_ not modelled 5.2 37 PDB header:transport protein Chain: B: PDB Molecule:uncharacterized protein drra; PDBTitle: crystal structure of human rab1b in complex with the gef domain of2 drra/sidm from legionella pneumophila 71 c1vtpA_ not modelled 5.0 40 PDB header:targeting peptide Chain: A: PDB Molecule:vacuolar targeting peptide; PDBTitle: vacuolar targeting peptide from na-propi