Email l.a.kelley@imperial.ac.uk Description P0A7F9 Date Thu Jan 5 11:05:35 GMT 2012 Unique Job ID d4d25aaf90de29ca

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1yy3A_ 100.0 45 PDB header:isomerase Chain: A: PDB Molecule:s-adenosylmethionine:trna ribosyltransferase- PDBTitle: structure of s-adenosylmethionine:trna ribosyltransferase-2 isomerase (quea) 2 d1wdia_ 100.0 48 Fold:QueA-like Superfamily:QueA-like Family:QueA-like 3 d1vkya_ 100.0 46 Fold:QueA-like Superfamily:QueA-like Family:QueA-like 4 d1jr7a_ 88.5 20 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Gab protein (hypothetical protein YgaT) 5 c3ms5A_ 86.1 44 PDB header:oxidoreductase Chain: A: PDB Molecule:gamma-butyrobetaine dioxygenase; PDBTitle: crystal structure of human gamma-butyrobetaine,2-oxoglutarate2 dioxygenase 1 (bbox1) 6 d1ds1a_ 84.7 56 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Clavaminate synthase 7 c2og5A_ 83.4 33 PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxygenase; PDBTitle: crystal structure of asparagine oxygenase (asno) 8 c2wbqA_ 81.9 33 PDB header:oxidoreductase Chain: A: PDB Molecule:l-arginine beta-hydroxylase; PDBTitle: crystal structure of vioc in complex with (2s,3s)-2 hydroxyarginine 9 d1oiha_ 81.2 17 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:TauD/TfdA-like 10 d1otja_ 79.3 17 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:TauD/TfdA-like 11 c3r1jB_ 77.2 22 PDB header:oxidoreductase Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase; PDBTitle: crystal structure of alpha-ketoglutarate-dependent taurine dioxygenase2 from mycobacterium avium, native form 12 c3pvjB_ 76.1 11 PDB header:oxidoreductase Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase; PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent taurine2 dioxygenase from pseudomonas putida kt2440 13 c3eatX_ 74.8 22 PDB header:oxidoreductase Chain: X: PDB Molecule:pyoverdine biosynthesis protein pvcb; PDBTitle: crystal structure of the pvcb (pa2255) protein from2 pseudomonas aeruginosa 14 d1y0za_ 69.3 33 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:gamma-Butyrobetaine hydroxylase 15 d1qyia_ 63.7 26 Fold:HAD-like Superfamily:HAD-like Family:Hypothetical protein MW1667 (SA1546) 16 d1nx4a_ 61.9 50 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:gamma-Butyrobetaine hydroxylase 17 c3p9zA_ 47.6 13 PDB header:ligase Chain: A: PDB Molecule:uroporphyrinogen iii cosynthase (hemd); PDBTitle: crystal structure of uroporphyrinogen-iii synthetase from helicobacter2 pylori 26695 18 c2nuxB_ 47.4 16 PDB header:lyase Chain: B: PDB Molecule:2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate PDBTitle: 2-keto-3-deoxygluconate aldolase from sulfolobus acidocaldarius,2 native structure in p6522 at 2.5 a resolution 19 d1hg3a_ 44.7 23 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 20 c2hc9A_ 44.5 18 PDB header:hydrolase Chain: A: PDB Molecule:leucine aminopeptidase 1; PDBTitle: structure of caenorhabditis elegans leucine aminopeptidase-zinc2 complex (lap1) 21 d1a3xa1 not modelled 44.5 11 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 22 c3ny0D_ not modelled 43.2 14 PDB header:metal binding protein Chain: D: PDB Molecule:urease accessory protein uree; PDBTitle: crystal structure of uree from helicobacter pylori (ni2+ bound form) 23 c3pihA_ not modelled 42.8 32 PDB header:hydrolase/dna Chain: A: PDB Molecule:uvrabc system protein a; PDBTitle: t. maritima uvra in complex with fluorescein-modified dna 24 d1ttja_ not modelled 40.1 45 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 25 c2h6rG_ not modelled 40.0 19 PDB header:isomerase Chain: G: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase (tim) from2 methanocaldococcus jannaschii 26 d1jr2a_ not modelled 38.6 20 Fold:HemD-like Superfamily:HemD-like Family:HemD-like 27 c1jr2A_ not modelled 38.6 20 PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: structure of uroporphyrinogen iii synthase 28 d1n55a_ not modelled 37.4 35 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 29 c2vf7B_ not modelled 37.2 39 PDB header:dna-binding protein Chain: B: PDB Molecule:excinuclease abc, subunit a.; PDBTitle: crystal structure of uvra2 from deinococcus radiodurans 30 d1mo0a_ not modelled 37.0 26 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 31 d1pkla1 not modelled 35.5 15 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 32 d1w0ma_ not modelled 35.5 28 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 33 d2ebfx2 not modelled 34.9 10 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:PMT domain-like 34 d1wjja_ not modelled 34.6 28 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 35 d2evra2 not modelled 34.5 28 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:NlpC/P60 36 d1sw3a_ not modelled 33.4 29 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 37 c2dp3A_ not modelled 32.9 29 PDB header:isomerase Chain: A: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of a double mutant (c202a/a198v) of triosephosphate2 isomerase from giardia lamblia 38 c1pklB_ not modelled 32.0 15 PDB header:transferase Chain: B: PDB Molecule:protein (pyruvate kinase); PDBTitle: the structure of leishmania pyruvate kinase 39 d1wd7a_ not modelled 31.0 18 Fold:HemD-like Superfamily:HemD-like Family:HemD-like 40 d2b8ea1 not modelled 30.1 17 Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P 41 c3fkkA_ not modelled 29.4 10 PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase 42 c1yyaA_ not modelled 29.4 26 PDB header:isomerase Chain: A: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of tt0473, putative triosephosphate isomerase from2 thermus thermophilus hb8 43 d1omha_ not modelled 28.7 31 Fold:Origin of replication-binding domain, RBD-like Superfamily:Origin of replication-binding domain, RBD-like Family:Relaxase domain 44 d1neya_ not modelled 28.6 29 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 45 c3kxqB_ not modelled 28.4 45 PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase from bartonella2 henselae at 1.6a resolution 46 c3i5aA_ not modelled 28.2 20 PDB header:signaling protein Chain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae 47 c3hvbB_ not modelled 28.2 13 PDB header:hydrolase Chain: B: PDB Molecule:protein fimx; PDBTitle: crystal structure of the dual-domain ggdef-eal module of2 fimx from pseudomonas aeruginosa 48 c3l6tB_ not modelled 28.2 24 PDB header:hydrolase Chain: B: PDB Molecule:mobilization protein trai; PDBTitle: crystal structure of an n-terminal mutant of the plasmid pcu1 trai2 relaxase domain 49 d1b9ba_ not modelled 28.1 32 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 50 c3d8tB_ not modelled 28.0 16 PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: thermus thermophilus uroporphyrinogen iii synthase 51 d1diha1 not modelled 27.1 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 52 c2x7jA_ not modelled 26.9 21 PDB header:transferase Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis 53 d1r2ra_ not modelled 26.7 26 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 54 d1suxa_ not modelled 26.6 42 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 55 d1o7ia_ not modelled 26.2 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 56 d1kv5a_ not modelled 25.8 45 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 57 c1nl3B_ not modelled 25.8 31 PDB header:protein transport Chain: B: PDB Molecule:preprotein translocase seca 1 subunit; PDBTitle: crystal structure of the seca protein translocation atpase2 from mycobacterium tuberculosis in apo form 58 d1xnea_ not modelled 24.4 33 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 59 d1w3ia_ not modelled 23.7 28 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 60 c1ayeA_ not modelled 23.4 16 PDB header:serine protease Chain: A: PDB Molecule:procarboxypeptidase a2; PDBTitle: human procarboxypeptidase a2 61 c3m9yB_ not modelled 22.5 35 PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase from methicillin2 resistant staphylococcus aureus at 1.9 angstrom resolution 62 c3civA_ not modelled 22.3 8 PDB header:hydrolase Chain: A: PDB Molecule:endo-beta-1,4-mannanase; PDBTitle: crystal structure of the endo-beta-1,4-mannanase from2 alicyclobacillus acidocaldarius 63 c2gm2A_ not modelled 21.9 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: nmr structure of xanthomonas campestris xcc1710: northeast2 structural genomics consortium target xcr35 64 c3ijpA_ not modelled 21.7 31 PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: crystal structure of dihydrodipicolinate reductase from2 bartonella henselae at 2.0a resolution 65 c2jgqB_ not modelled 21.6 26 PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: kinetics and structural properties of triosephosphate2 isomerase from helicobacter pylori 66 c3shoA_ not modelled 20.7 29 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) 67 c3dinB_ not modelled 20.5 25 PDB header:membrane protein, protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase 68 d1jmca1 not modelled 20.5 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 69 d1m6ja_ not modelled 20.5 32 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 70 c2boaB_ not modelled 20.5 15 PDB header:hydrolase Chain: B: PDB Molecule:carboxypeptidase a4; PDBTitle: human procarboxypeptidase a4. 71 d2g50a1 not modelled 20.4 8 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain 72 c2k50A_ not modelled 20.0 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:replication factor a related protein; PDBTitle: solution nmr structure of the replication factor a related2 protein from methanobacterium thermoautotrophicum.3 northeast structural genomics target tr91a. 73 d1ntga_ not modelled 19.9 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Myf domain 74 c3bi8A_ not modelled 19.9 22 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum 75 d1o5xa_ not modelled 19.8 23 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 76 c1drwA_ not modelled 19.3 19 PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: escherichia coli dhpr/nhdh complex 77 d1hl2a_ not modelled 19.2 25 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 78 c2eo2A_ not modelled 18.4 22 PDB header:oxidoreductase Chain: A: PDB Molecule:adult male hypothalamus cdna, riken full-length PDBTitle: solution structure of the insertion region (510-573) of2 fthfs domain from mouse methylenetetrahydrofolate3 dehydrogenase (nadp+ dependent) 1-like protein 79 c3s6dA_ not modelled 18.3 32 PDB header:isomerase Chain: A: PDB Molecule:putative triosephosphate isomerase; PDBTitle: crystal structure of a putative triosephosphate isomerase from2 coccidioides immitis 80 c3lerA_ not modelled 18.0 18 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 81 c1ynxA_ not modelled 18.0 18 PDB header:dna binding protein Chain: A: PDB Molecule:replication factor-a protein 1; PDBTitle: solution structure of dna binding domain a (dbd-a) of2 s.cerevisiae replication protein a (rpa) 82 c3krsB_ not modelled 17.9 32 PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: structure of triosephosphate isomerase from cryptosporidium parvum at2 1.55a resolution 83 c3gvgA_ not modelled 17.6 26 PDB header:isomerase Chain: A: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase from mycobacterium2 tuberculosis 84 c2zpmA_ not modelled 16.9 29 PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain b 85 d1o1xa_ not modelled 16.8 25 Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB 86 c3th6B_ not modelled 16.8 26 PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase from rhipicephalus2 (boophilus) microplus. 87 c2ygrD_ not modelled 16.7 36 PDB header:hydrolase Chain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra 88 c3pl0B_ not modelled 16.2 25 PDB header:biosynthetic protein Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a bsma homolog (mpe_a2762) from methylobium2 petroleophilum pm1 at 1.91 a resolution 89 d1trea_ not modelled 16.2 29 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 90 c3ahxC_ not modelled 16.1 24 PDB header:hydrolase Chain: C: PDB Molecule:beta-glucosidase a; PDBTitle: crystal structure of beta-glucosidase a from bacterium clostridium2 cellulovorans 91 d1p4da_ not modelled 16.0 28 Fold:Origin of replication-binding domain, RBD-like Superfamily:Origin of replication-binding domain, RBD-like Family:Relaxase domain 92 d1aw1a_ not modelled 15.8 32 Fold:TIM beta/alpha-barrel Superfamily:Triosephosphate isomerase (TIM) Family:Triosephosphate isomerase (TIM) 93 d1wcga1 not modelled 15.8 20 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Family 1 of glycosyl hydrolase 94 d1owfa_ not modelled 15.6 22 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 95 c3hv9A_ not modelled 15.4 13 PDB header:hydrolase Chain: A: PDB Molecule:protein fimx; PDBTitle: crystal structure of fimx eal domain from pseudomonas aeruginosa 96 c3e96B_ not modelled 15.4 12 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 bacillus clausii 97 d1s04a_ not modelled 15.4 27 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 98 c2iyeC_ not modelled 15.3 23 PDB header:hydrolase Chain: C: PDB Molecule:copper-transporting atpase; PDBTitle: structure of catalytic cpx-atpase domain copb-b 99 d1o5ka_ not modelled 14.8 17 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase