PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2jgqB_

Fold library id	PDB Header	Molecule	Title
c2jgqB_	PDB header: isomerase	Chain: B: PDB Molecule: triosephosphate isomerase;	PDBTitle: kinetics and structural properties of triosephosphate2 isomerase from helicobacter pylori

Links to external resources
Added to library: Tue Mar 16 13:45:01 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T K I A M A N F K S A M P I F K S H A Y L K E L E K T L K P Q H F D R V F V F P D F F G L L P N S F L H F T L G V Q N A Y P R D C G A F T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S
G G G T T T
T T T
S
S S S
B S
B S S S S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E I T S K H L E E L K I H T L L I G H S E R R T L L K E S P S F L K E K F D F F K S K N F K I V Y C I G E E L T T R E K G F K A V K E F L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T
T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E Q L E N I D L N Y P N L V V A Y E P I W A I G T S A S L E D I Y L T H G F L K Q I L N Q K T P L L Y G G S V N T Q N A K E I L G I D S V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
T T
G G G T T
T T T S
T T S
S S
T T T T S T T

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence G L L I G S A S W E L E N F K T I I S F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	K	I	A	M	A	N	F	K	S	A	M	P	I	F	K	S	H	A	Y	L	K	E	L	E	K	T	L	K	P	Q	H	F	D	R	V	F	V	F	P	D	F	F	G	L	L	P	N	S	F	L	H	F	T	L	G	V	Q	N	A	Y	P	R	D	C	G	A	F	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		S																S		G	G	G	T	T	T							T	T	T				S			S	S	S				B	S			B	S	S	S	S		S		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	I	T	S	K	H	L	E	E	L	K	I	H	T	L	L	I	G	H	S	E	R	R	T	L	L	K	E	S	P	S	F	L	K	E	K	F	D	F	F	K	S	K	N	F	K	I	V	Y	C	I	G	E	E	L	T	T	R	E	K	G	F	K	A	V	K	E	F	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B							T	T														T	S																	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	Q	L	E	N	I	D	L	N	Y	P	N	L	V	V	A	Y	E	P	I	W	A	I	G	T	S	A	S	L	E	D	I	Y	L	T	H	G	F	L	K	Q	I	L	N	Q	K	T	P	L	L	Y	G	G	S	V	N	T	Q	N	A	K	E	I	L	G	I	D	S	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S		T	T		T	T								G	G	G	T	T																T	T	T	S		T	T	S						S	S			T	T	T						T	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	G	L	L	I	G	S	A	S	W	E	L	E	N	F	K	T	I	I	S	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G	S									T	T