Email l.a.kelley@imperial.ac.uk Description P42904 Date Thu Jan 5 12:02:02 GMT 2012 Unique Job ID ce8aacf37400cc95

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1nrza_ 100.0 35 Fold:PTS IIb component Superfamily:PTS IIb component Family:PTS IIb component 2 c1vsqC_ 100.0 37 PDB header:transferase Chain: C: PDB Molecule:mannose-specific phosphotransferase enzyme iib PDBTitle: solution nmr structure of the productive complex between2 iiamannose and iibmannose of the mannose transporter of3 the e. coli phosphotransferase system 3 c3lfjB_ 100.0 25 PDB header:transferase Chain: B: PDB Molecule:phosphotransferase system, mannose/fructose/n- PDBTitle: crystal structure of manxb from thermoanaerobacter tengcongensis 4 d1blea_ 100.0 33 Fold:PTS IIb component Superfamily:PTS IIb component Family:PTS IIb component 5 c3p3vB_ 100.0 42 PDB header:transferase Chain: B: PDB Molecule:pts system, n-acetylgalactosamine-specific iib component; PDBTitle: crystal structure of a pts dependent n-acetyl-galactosamine-iib2 component (agav, spy_0631) from streptococcus pyogenes at 1.65 a3 resolution 6 c3eyeA_ 100.0 46 PDB header:transferase Chain: A: PDB Molecule:pts system n-acetylgalactosamine-specific iib PDBTitle: crystal structure of pts system n-acetylgalactosamine-2 specific iib component 1 from escherichia coli 7 c1qapA_ 65.0 8 PDB header:glycosyltransferase Chain: A: PDB Molecule:quinolinic acid phosphoribosyltransferase; PDBTitle: quinolinic acid phosphoribosyltransferase with bound2 quinolinic acid 8 c3l0gD_ 62.3 16 PDB header:transferase Chain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution 9 d1r8ja2 54.3 17 Fold:Flavodoxin-like Superfamily:CheY-like Family:N-terminal domain of the circadian clock protein KaiA 10 c3rfaA_ 52.2 14 PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine 11 d1k68a_ 48.1 9 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 12 c3ilhA_ 44.9 11 PDB header:transcription regulator Chain: A: PDB Molecule:two component response regulator; PDBTitle: crystal structure of two component response regulator from cytophaga2 hutchinsonii 13 d1qapa1 44.5 8 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:NadC C-terminal domain-like 14 c3pm7A_ 42.5 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of ef_3132 protein from enterococcus faecalis at the2 resolution 2a, northeast structural genomics consortium target efr184 15 c2k1oA_ 37.7 19 PDB header:gene regulation Chain: A: PDB Molecule:putative; PDBTitle: nmr structure of helicobacter pylori jhp0511 (hp0564). 16 c2yxxA_ 35.7 16 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure analysis of diaminopimelate decarboxylate (lysa) 17 c3btnA_ 35.1 11 PDB header:biosynthetic protein Chain: A: PDB Molecule:antizyme inhibitor 1; PDBTitle: crystal structure of antizyme inhibitor, an ornithine2 decarboxylase homologous protein 18 c3obhA_ 33.1 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: x-ray crystal structure of protein sp_0782 (7-79) from streptococcus2 pneumoniae. northeast structural genomics consortium target spr104 19 c3pajA_ 33.0 11 PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase, carboxylating; PDBTitle: 2.00 angstrom resolution crystal structure of a quinolinate2 phosphoribosyltransferase from vibrio cholerae o1 biovar eltor str.3 n16961 20 d1qpoa1 30.9 9 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:NadC C-terminal domain-like 21 c2y5sA_ not modelled 30.5 12 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. 22 d1t0kb_ not modelled 30.2 10 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:L30e/L7ae ribosomal proteins 23 c3gl9B_ not modelled 30.2 15 PDB header:signaling protein Chain: B: PDB Molecule:response regulator; PDBTitle: the structure of a histidine kinase-response regulator2 complex sheds light into two-component signaling and3 reveals a novel cis autophosphorylation mechanism 24 c3eqzB_ not modelled 29.7 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from colwellia2 psychrerythraea 25 d1k66a_ not modelled 29.2 17 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 26 d1ajza_ not modelled 27.4 14 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 27 d2obba1 not modelled 27.2 7 Fold:HAD-like Superfamily:HAD-like Family:BT0820-like 28 c3khtA_ not modelled 26.5 12 PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis 29 c3eywA_ not modelled 25.8 18 PDB header:transport protein Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff 30 c2qv0A_ not modelled 25.1 15 PDB header:transcription Chain: A: PDB Molecule:protein mrke; PDBTitle: crystal structure of the response regulatory domain of2 protein mrke from klebsiella pneumoniae 31 c3cz5B_ not modelled 24.7 8 PDB header:transcription regulator Chain: B: PDB Molecule:two-component response regulator, luxr family; PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1 32 c3n53B_ not modelled 24.6 10 PDB header:transcription Chain: B: PDB Molecule:response regulator receiver modulated diguanylate cyclase; PDBTitle: crystal structure of a response regulator receiver modulated2 diguanylate cyclase from pelobacter carbinolicus 33 d1d7ka2 not modelled 23.4 8 Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain 34 c1qpoA_ not modelled 22.2 9 PDB header:transferase Chain: A: PDB Molecule:quinolinate acid phosphoribosyl transferase; PDBTitle: quinolinate phosphoribosyl transferase (qaprtase) apo-enzyme from2 mycobacterium tuberculosis 35 d2i7pa1 not modelled 21.6 14 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Fumble-like 36 c3cnbC_ not modelled 20.2 11 PDB header:dna binding protein Chain: C: PDB Molecule:dna-binding response regulator, merr family; PDBTitle: crystal structure of signal receiver domain of dna binding response2 regulator protein (merr) from colwellia psychrerythraea 34h 37 c3m6mF_ not modelled 19.8 25 PDB header:lyase/transferase Chain: F: PDB Molecule:sensory/regulatory protein rpfc; PDBTitle: crystal structure of rpff complexed with rec domain of rpfc 38 c3q41B_ not modelled 19.4 11 PDB header:transport protein Chain: B: PDB Molecule:glutamate [nmda] receptor subunit zeta-1; PDBTitle: crystal structure of the glun1 n-terminal domain (ntd) 39 d1kgsa1 not modelled 18.4 8 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 40 d1a04a2 not modelled 17.3 12 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 41 c3hebB_ not modelled 16.9 13 PDB header:transcription regulator Chain: B: PDB Molecule:response regulator receiver domain protein (chey); PDBTitle: crystal structure of response regulator receiver domain from2 rhodospirillum rubrum 42 c2on3A_ not modelled 16.8 8 PDB header:lyase Chain: A: PDB Molecule:ornithine decarboxylase; PDBTitle: a structural insight into the inhibition of human and2 leishmania donovani ornithine decarboxylases by 3-aminooxy-3 1-aminopropane 43 d2i7na2 not modelled 16.7 11 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Fumble-like 44 d1hkva2 not modelled 16.5 19 Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain 45 c2qvgA_ not modelled 16.4 8 PDB header:transferase Chain: A: PDB Molecule:two component response regulator; PDBTitle: the crystal structure of a two-component response regulator2 from legionella pneumophila 46 d1ad1a_ not modelled 16.1 18 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 47 d1dd9a_ not modelled 15.5 17 Fold:DNA primase core Superfamily:DNA primase core Family:DNA primase DnaG catalytic core 48 c1dd9A_ not modelled 15.5 17 PDB header:transferase Chain: A: PDB Molecule:dna primase; PDBTitle: structure of the dnag catalytic core 49 c3cg0A_ not modelled 15.4 13 PDB header:lyase Chain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding 50 c2bmbA_ not modelled 15.1 20 PDB header:transferase Chain: A: PDB Molecule:folic acid synthesis protein fol1; PDBTitle: x-ray structure of the bifunctional 6-hydroxymethyl-7,8-2 dihydroxypterin pyrophosphokinase dihydropteroate synthase3 from saccharomyces cerevisiae 51 c1x1oC_ not modelled 14.9 11 PDB header:transferase Chain: C: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of project id tt0268 from thermus thermophilus hb8 52 c2qsjB_ not modelled 14.8 12 PDB header:transcription Chain: B: PDB Molecule:dna-binding response regulator, luxr family; PDBTitle: crystal structure of a luxr family dna-binding response2 regulator from silicibacter pomeroyi 53 d1i3ca_ not modelled 14.4 9 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 54 c2is8A_ not modelled 13.5 13 PDB header:structural protein Chain: A: PDB Molecule:molybdopterin biosynthesis enzyme, moab; PDBTitle: crystal structure of the molybdopterin biosynthesis enzyme moab2 (ttha0341) from thermus theromophilus hb8 55 c2oqrA_ not modelled 13.0 19 PDB header:transcription,signaling protein Chain: A: PDB Molecule:sensory transduction protein regx3; PDBTitle: the structure of the response regulator regx3 from mycobacterium2 tuberculosis 56 c3eulB_ not modelled 13.0 9 PDB header:transcription Chain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis 57 d1k3ra2 not modelled 13.0 9 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:Hypothetical protein MTH1 (MT0001), dimerisation domain 58 c3q9vB_ not modelled 12.8 8 PDB header:dna binding protein Chain: B: PDB Molecule:dna-binding response regulator; PDBTitle: crystal structure of rra c-terminal domain(123-221) from deinococcus2 radiodurans 59 d1oqya2 not modelled 12.7 24 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 60 d2r25b1 not modelled 12.6 19 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 61 c2zkr6_ not modelled 12.5 10 PDB header:ribosomal protein/rna Chain: 6: PDB Molecule:60s ribosomal protein l30e; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 62 d1o4ua1 not modelled 12.5 16 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:NadC C-terminal domain-like 63 c2dzaA_ not modelled 12.4 15 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of dihydropteroate synthase from thermus2 thermophilus hb8 in complex with 4-aminobenzoate 64 c3c3wB_ not modelled 12.3 8 PDB header:transcription Chain: B: PDB Molecule:two component transcriptional regulatory protein devr; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr 65 c2o0tB_ not modelled 12.3 18 PDB header:lyase Chain: B: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: the three dimensional structure of diaminopimelate decarboxylase from2 mycobacterium tuberculosis reveals a tetrameric enzyme organisation 66 c3kyiB_ not modelled 12.1 13 PDB header:transferase Chain: B: PDB Molecule:chey6 protein; PDBTitle: crystal structure of the phosphorylated p1 domain of chea3 in complex2 with chey6 from r. sphaeroides 67 d1w41a1 not modelled 12.0 22 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:L30e/L7ae ribosomal proteins 68 d1t6t1_ not modelled 11.9 17 Fold:Toprim domain Superfamily:Toprim domain Family:Toprim domain 69 c2qxyB_ not modelled 11.9 18 PDB header:transcription Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from thermotoga2 maritima 70 d1mb3a_ not modelled 11.9 12 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 71 d2f1fa1 not modelled 11.6 8 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 72 c3h5iA_ not modelled 11.4 11 PDB header:transcription Chain: A: PDB Molecule:response regulator/sensory box protein/ggdef PDBTitle: crystal structure of the n-terminal domain of a response2 regulator/sensory box/ggdef 3-domain protein from3 carboxydothermus hydrogenoformans 73 c2a5hC_ not modelled 11.2 25 PDB header:isomerase Chain: C: PDB Molecule:l-lysine 2,3-aminomutase; PDBTitle: 2.1 angstrom x-ray crystal structure of lysine-2,3-aminomutase from2 clostridium subterminale sb4, with michaelis analog (l-alpha-lysine3 external aldimine form of pyridoxal-5'-phosphate). 74 d2fgca2 not modelled 11.1 21 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 75 c3h6hB_ not modelled 11.1 10 PDB header:membrane protein Chain: B: PDB Molecule:glutamate receptor, ionotropic kainate 2; PDBTitle: crystal structure of the glur6 amino terminal domain dimer assembly2 mpd form 76 d2bo1a1 not modelled 10.9 16 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:L30e/L7ae ribosomal proteins 77 c2k5jB_ not modelled 10.8 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein yiif; PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1 78 c3cpqB_ not modelled 10.7 14 PDB header:ribosomal protein Chain: B: PDB Molecule:50s ribosomal protein l30e; PDBTitle: crystal structure of l30e a ribosomal protein from2 methanocaldococcus jannaschii dsm2661 (mj1044) 79 c3luaA_ not modelled 10.4 14 PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum 80 c2zayA_ not modelled 10.4 5 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator from desulfuromonas2 acetoxidans 81 d1dz3a_ not modelled 10.4 14 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 82 c2yr1B_ not modelled 10.2 13 PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of 3-dehydroquinate dehydratase from geobacillus2 kaustophilus hta426 83 c3n2bD_ not modelled 10.2 14 PDB header:lyase Chain: D: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of diaminopimelate2 decarboxylase (lysa) from vibrio cholerae. 84 c3cg4A_ not modelled 10.2 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey-like); PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1 85 c1rnlA_ not modelled 10.2 12 PDB header:signal transduction protein Chain: A: PDB Molecule:nitrate/nitrite response regulator protein narl; PDBTitle: the nitrate/nitrite response regulator protein narl from narl 86 c1k3rA_ not modelled 10.1 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein mt0001; PDBTitle: crystal structure of the methyltransferase with a knot from2 methanobacterium thermoautotrophicum 87 d1o57a2 not modelled 10.1 13 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 88 c1a2oB_ not modelled 10.0 12 PDB header:bacterial chemotaxis Chain: B: PDB Molecule:cheb methylesterase; PDBTitle: structural basis for methylesterase cheb regulation by a2 phosphorylation-activated domain 89 c3lufB_ not modelled 10.0 7 PDB header:signaling protein Chain: B: PDB Molecule:two-component system response regulator/ggdef PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein 90 c3smpA_ not modelled 9.8 11 PDB header:transferase Chain: A: PDB Molecule:pantothenate kinase 1; PDBTitle: monoclinic crystal structure of human pantothenate kinase 1 alpha 91 d1nyra3 not modelled 9.8 11 Fold:RRF/tRNA synthetase additional domain-like Superfamily:ThrRS/AlaRS common domain Family:Threonyl-tRNA synthetase (ThrRS), second 'additional' domain 92 c3c3mA_ not modelled 9.7 14 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1 93 c3jteA_ not modelled 9.6 12 PDB header:protein binding Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver domain2 protein from clostridium thermocellum 94 c2y7eA_ not modelled 9.5 16 PDB header:lyase Chain: A: PDB Molecule:3-keto-5-aminohexanoate cleavage enzyme; PDBTitle: crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme2 (kce) from candidatus cloacamonas acidaminovorans (tetragonal form) 95 c3t8yA_ not modelled 9.5 10 PDB header:hydrolase Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate PDBTitle: crystal structure of the response regulator domain of thermotoga2 maritima cheb 96 d1u0sy_ not modelled 9.4 13 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 97 d1bs0a_ not modelled 9.3 15 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 98 c2i7pA_ not modelled 9.2 14 PDB header:transferase Chain: A: PDB Molecule:pantothenate kinase 3; PDBTitle: crystal structure of human pank3 in complex with accoa 99 d2pc6a2 not modelled 9.1 6 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like